Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|256
Gene name
LocationContig_106:19572..20480
Strand+
Gene length (bp)908
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14880 COX14 Cytochrome oxidase c assembly 4.3E-13 76 130

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

Domain # Start End Length
1 88 110 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|256
MISRLQTRSVKDATRFTSTVPHAMSKANSPTTPPPRPKSSSWLPGETAEQRVVRLRKAHDAALKAQNDKPMERFL
DSMRVVLDAAHKLTVNGLILFTVLAGIVSIYSIWDMLRFNRARRAEWIKVQMKLESDELSAARVAYVKGEGTEEQ
IALVEEANREAARMGTKLPPLLPPPEQRTHFEEKVQPVLFPREASSDGKGIWGMVSGFFGGSASGSSSSSNGEAD
TRTEPDVTTDAMAQTVEATAKGAWETEKERQRSGGSLDRLGLDVGASQGTRRWWPW*
Coding >Ophun1|256
ATGATCTCCCGCCTGCAAACGCGGAGCGTCAAGGACGCCACCCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACGACGCCTCCTCCTCGGCCCAAGTCTTCGTCCTGGCTGCCCGGCGAGACGGCAGAGCAG
CGGGTGGTGCGTCTGCGGAAGGCGCATGACGCGGCGCTCAAGGCTCAGAATGATAAGCCCATGGAGCGCTTTCTC
GACTCCATGAGGGTGGTTTTGGACGCGGCGCATAAGTTGACGGTCAATGGCCTTATTCTCTTTACGGTTCTCGCC
GGTATTGTCAGCATCTACTCCATCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATAAAAGTC
CAAATGAAGCTCGAGTCAGACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAAGAACAG
ATCGCGCTCGTCGAAGAGGCCAATCGCGAGGCCGCAAGGATGGGCACCAAGCTGCCACCGCTGCTACCGCCTCCC
GAGCAGCGGACGCACTTTGAGGAGAAGGTACAGCCTGTTCTCTTCCCGCGCGAGGCGAGTTCGGATGGGAAGGGT
ATCTGGGGGATGGTTTCTGGCTTCTTTGGCGGGAGTGCCAGCGGTAGCAGCAGCAGCAGCAACGGCGAAGCAGAC
ACCCGGACAGAACCCGACGTCACGACCGATGCCATGGCCCAGACGGTCGAAGCCACGGCCAAGGGCGCGTGGGAG
ACGGAGAAGGAGAGGCAGCGCAGTGGCGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCACAGGGGACG
AGGCGATGGTGGCCTTGGTGA
Transcript >Ophun1|256
ATGATCTCCCGCCTGCAAACGCGGAGCGTCAAGGACGCCACCCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACGACGCCTCCTCCTCGGCCCAAGTCTTCGTCCTGGCTGCCCGGCGAGACGGCAGAGCAG
CGGGTGGTGCGTCTGCGGAAGGCGCATGACGCGGCGCTCAAGGCTCAGAATGATAAGCCCATGGAGCGCTTTCTC
GACTCCATGAGGGTGGTTTTGGACGCGGCGCATAAGTTGACGGTCAATGGCCTTATTCTCTTTACGGTTCTCGCC
GGTATTGTCAGCATCTACTCCATCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATAAAAGTC
CAAATGAAGCTCGAGTCAGACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAAGAACAG
ATCGCGCTCGTCGAAGAGGCCAATCGCGAGGCCGCAAGGATGGGCACCAAGCTGCCACCGCTGCTACCGCCTCCC
GAGCAGCGGACGCACTTTGAGGAGAAGGTACAGCCTGTTCTCTTCCCGCGCGAGGCGAGTTCGGATGGGAAGGGT
ATCTGGGGGATGGTTTCTGGCTTCTTTGGCGGGAGTGCCAGCGGTAGCAGCAGCAGCAGCAACGGCGAAGCAGAC
ACCCGGACAGAACCCGACGTCACGACCGATGCCATGGCCCAGACGGTCGAAGCCACGGCCAAGGGCGCGTGGGAG
ACGGAGAAGGAGAGGCAGCGCAGTGGCGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCACAGGGGACG
AGGCGATGGTGGCCTTGGTGA
Gene >Ophun1|256
ATGATCTCCCGCCTGCAAACGCGGAGCGTCAAGGACGCCACCCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACGACGCCTCCTCCTCGGCCCAAGTCTTCGTCCTGGCTGCCCGGCGAGACGGCAGAGCAG
CGGGTGGTGCGTCTGCGGAAGGCGCATGACGCGGCGCTCAAGGCTCAGAATGATAAGCCCATGGAGCGCTTTCTC
GACTCCATGAGGGTGGTTTTGGACGCGGCGCATAAGTTGACGGTCAATGGCCTTATTCTCTTTACGGGTATTGTT
CCGTCCGCTCTTTGTTCACCTTTGCAGACGAGCAGATGGCTGAGATTCGGGCAGTTCTCGCCGGTATTGTCAGCA
TCTACTCCATCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATAAAAGTCCAAATGAAGCTCG
AGTCAGACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAAGAACAGATCGCGCTCGTCG
AAGAGGCCAATCGCGAGGCCGCAAGGATGGGCACCAAGCTGCCACCGCTGCTACCGCCTCCCGAGCAGCGGACGC
ACTTTGAGGAGAAGGTACAGCCTGTTCTCTTCCCGCGCGAGGCGAGTTCGGATGGGAAGGGTATCTGGGGGATGG
TTTCTGGCTTCTTTGGCGGGAGTGCCAGCGGTAGCAGCAGCAGCAGCAACGGCGAAGCAGACACCCGGACAGAAC
CCGACGTCACGACCGATGCCATGGCCCAGACGGTCGAAGCCACGGCCAAGGGCGCGTGGGAGACGGAGAAGGAGA
GGCAGCGCAGTGGCGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCACAGGGGACGAGGCGATGGTGGC
CTTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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