© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|25 |
| Gene name | |
| Location | Contig_1:62225..62834 |
| Strand | + |
| Gene length (bp) | 609 |
| Transcript length (bp) | 609 |
| Coding sequence length (bp) | 609 |
| Protein length (aa) | 203 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03364 | Polyketide_cyc | Polyketide cyclase / dehydrase and lipid transport | 4.5E-10 | 55 | 168 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9USM9|COQ10_SCHPO | Coenzyme Q-binding protein coq10, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=coq10 PE=3 SV=1 | 44 | 188 | 1.0E-13 |
| sp|Q6PBN4|CQ10X_DANRE | Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2 | 43 | 194 | 7.0E-10 |
| sp|Q9ZDZ7|RATA_RICPR | Ribosome association toxin RatA OS=Rickettsia prowazekii (strain Madrid E) GN=ratA PE=3 SV=1 | 45 | 199 | 9.0E-09 |
| sp|Q75CC1|COQ10_ASHGO | Coenzyme Q-binding protein COQ10, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COQ10 PE=3 SV=1 | 8 | 200 | 7.0E-08 |
| sp|Q96MF6|CQ10A_HUMAN | Coenzyme Q-binding protein COQ10 homolog A, mitochondrial OS=Homo sapiens GN=COQ10A PE=2 SV=2 | 46 | 198 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|25 MPPRILQLRRPQLILRHRPSSLPLIQHRLLLNLDAEGPPRHCTASRRLPFAAMPLYEIIVDIDSYKEFLTGCSQS AVTRWTEPDAHGRRWPDEAILTLGFRSISETFTSKLKCCPGVLIETVAGPGEQETGSRALISSLRTRWTLQPTSR GPNVETEVRVDIDYRMRHIASDFLIASYVPQVLEAVVKLFERRAYEKLRETS* |
| Coding | >Ophun1|25 ATGCCGCCGCGAATACTGCAGCTGCGGCGACCGCAGCTCATTCTGCGCCATCGTCCCTCTTCCTTGCCTCTCATC CAGCACCGTCTTCTTCTAAACCTCGATGCCGAAGGCCCTCCGCGTCACTGCACCGCCAGTCGCAGGCTGCCGTTC GCAGCCATGCCGCTCTATGAAATCATCGTCGACATCGACTCTTACAAAGAATTCCTCACTGGATGTTCACAATCC GCAGTCACCCGTTGGACTGAACCGGATGCTCACGGACGCCGTTGGCCTGACGAGGCGATACTGACCCTTGGCTTC AGGAGCATATCAGAGACGTTTACCAGCAAGCTGAAGTGCTGTCCGGGCGTTCTCATCGAAACCGTCGCCGGCCCT GGCGAACAGGAAACCGGCTCTAGAGCTCTCATCAGTTCCCTCCGAACCCGCTGGACTCTGCAGCCTACCTCGCGG GGGCCCAATGTCGAGACTGAAGTCCGCGTCGACATCGACTACCGAATGAGACACATTGCATCCGATTTTCTCATC GCCAGCTATGTGCCCCAGGTTCTCGAGGCCGTGGTCAAACTCTTCGAGAGGCGAGCCTACGAGAAGCTGAGAGAG ACGAGCTAA |
| Transcript | >Ophun1|25 ATGCCGCCGCGAATACTGCAGCTGCGGCGACCGCAGCTCATTCTGCGCCATCGTCCCTCTTCCTTGCCTCTCATC CAGCACCGTCTTCTTCTAAACCTCGATGCCGAAGGCCCTCCGCGTCACTGCACCGCCAGTCGCAGGCTGCCGTTC GCAGCCATGCCGCTCTATGAAATCATCGTCGACATCGACTCTTACAAAGAATTCCTCACTGGATGTTCACAATCC GCAGTCACCCGTTGGACTGAACCGGATGCTCACGGACGCCGTTGGCCTGACGAGGCGATACTGACCCTTGGCTTC AGGAGCATATCAGAGACGTTTACCAGCAAGCTGAAGTGCTGTCCGGGCGTTCTCATCGAAACCGTCGCCGGCCCT GGCGAACAGGAAACCGGCTCTAGAGCTCTCATCAGTTCCCTCCGAACCCGCTGGACTCTGCAGCCTACCTCGCGG GGGCCCAATGTCGAGACTGAAGTCCGCGTCGACATCGACTACCGAATGAGACACATTGCATCCGATTTTCTCATC GCCAGCTATGTGCCCCAGGTTCTCGAGGCCGTGGTCAAACTCTTCGAGAGGCGAGCCTACGAGAAGCTGAGAGAG ACGAGCTAA |
| Gene | >Ophun1|25 ATGCCGCCGCGAATACTGCAGCTGCGGCGACCGCAGCTCATTCTGCGCCATCGTCCCTCTTCCTTGCCTCTCATC CAGCACCGTCTTCTTCTAAACCTCGATGCCGAAGGCCCTCCGCGTCACTGCACCGCCAGTCGCAGGCTGCCGTTC GCAGCCATGCCGCTCTATGAAATCATCGTCGACATCGACTCTTACAAAGAATTCCTCACTGGATGTTCACAATCC GCAGTCACCCGTTGGACTGAACCGGATGCTCACGGACGCCGTTGGCCTGACGAGGCGATACTGACCCTTGGCTTC AGGAGCATATCAGAGACGTTTACCAGCAAGCTGAAGTGCTGTCCGGGCGTTCTCATCGAAACCGTCGCCGGCCCT GGCGAACAGGAAACCGGCTCTAGAGCTCTCATCAGTTCCCTCCGAACCCGCTGGACTCTGCAGCCTACCTCGCGG GGGCCCAATGTCGAGACTGAAGTCCGCGTCGACATCGACTACCGAATGAGACACATTGCATCCGATTTTCTCATC GCCAGCTATGTGCCCCAGGTTCTCGAGGCCGTGGTCAAACTCTTCGAGAGGCGAGCCTACGAGAAGCTGAGAGAG ACGAGCTAA |