Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2485
Gene name
LocationContig_224:10492..12594
Strand-
Gene length (bp)2102
Transcript length (bp)1989
Coding sequence length (bp)1989
Protein length (aa) 663

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05602 CLPTM1 Cleft lip and palate transmembrane protein 1 (CLPTM1) 1.7E-152 36 515

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1 157 620 7.0E-107
sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1 157 620 2.0E-106
sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1 157 620 4.0E-104
sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1 157 647 4.0E-102
sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1 101 623 4.0E-95
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Swissprot ID Swissprot Description Start End E-value
sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1 157 620 7.0E-107
sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1 157 620 2.0E-106
sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1 157 620 4.0E-104
sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1 157 647 4.0E-102
sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1 101 623 4.0E-95
sp|Q5R7B1|CLP1L_PONAB Cleft lip and palate transmembrane protein 1-like protein OS=Pongo abelii GN=CLPTM1L PE=2 SV=1 135 622 1.0E-85
sp|Q96KA5|CLP1L_HUMAN Cleft lip and palate transmembrane protein 1-like protein OS=Homo sapiens GN=CLPTM1L PE=1 SV=1 135 622 2.0E-85
sp|Q8BXA5|CLP1L_MOUSE Cleft lip and palate transmembrane protein 1-like protein OS=Mus musculus GN=Clptm1l PE=1 SV=1 135 627 1.0E-84
sp|Q5ZKJ0|CLP1L_CHICK Cleft lip and palate transmembrane protein 1-like protein OS=Gallus gallus GN=CLPTM1L PE=2 SV=1 135 627 6.0E-83
sp|A2VE61|CLP1L_BOVIN Cleft lip and palate transmembrane protein 1-like protein OS=Bos taurus GN=CLPTM1L PE=2 SV=1 135 628 3.0E-81
sp|Q6DHU1|CLP1L_DANRE Cleft lip and palate transmembrane protein 1-like protein OS=Danio rerio GN=clptm1l PE=2 SV=1 135 622 3.0E-80
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 29 51 22
2 369 391 22
3 404 426 22
4 431 448 17
5 492 514 22
6 524 546 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2485
MSSSVGQRKPETQPVAAPPQQQQQRGGGFNFNRLVLGIAIYIGLNFALSAFMGKGQRSVSVTDPATGEPVAVASN
MEGIPPFQLRPKTLDEGKQYRALPRRIAPIWPQDSTVDIVVTLSPSFKPMAIADTPSEYVVLREEGFHMDNKSDV
RSIDTTFNVPKDVQNNGTLWGHFYIGLTGSQLDPREPGFDSERAYHFAHPLTQYLAKKKVAKTRNLLDSRSEAEP
EEPKPVGPIITSHYHPNASFAFVPAMGVKDFSQLHPAIRQFLRLEATGARDGSGENGWYYPLLFVNTFWQLSSHM
TVLNDTVKELPLHIELKNMAFWQFQVLASIEMNSKENARQAAFGASLPGGGDGTEIEMVKEIFMDTNPILLAITA
VVTVAHLILETLAFGSDIAHYRKKKDNVGISVRSILANVVMQAIIFLYLLDNSQNTSWMILGTQGIGIVIELWKM
TTVVDVRLRPAAPGSLIPWRLTMEDKHQLTETEAKTKEYDEVAFRYMYAVAVPLLAAYGIYSLVYDTHKSWYSFV
ITTLVGSVYAYGFLMMVPSLYINYRLKSVAHMPGKAMMYKFLNTFIDDLFAFTIKMPVLHRLATFRDDVIFFVYL
YQRWAYRTDYSRVNEFGQGGGEDEGEKKEVKKDGEEEEEKLGEVKDEGKATGREGGQATRRR*
Coding >Ophun1|2485
ATGTCGTCTTCAGTCGGCCAACGGAAGCCGGAGACGCAGCCGGTAGCGGCGCCTCCGCAGCAGCAGCAGCAGAGG
GGAGGCGGCTTCAACTTCAACCGGCTGGTGCTCGGCATCGCCATCTACATCGGGCTGAACTTTGCGCTCTCGGCT
TTTATGGGCAAGGGACAGCGCTCTGTCTCCGTTACGGATCCTGCCACGGGAGAGCCTGTGGCTGTGGCGAGCAAT
ATGGAGGGTATCCCGCCTTTTCAGCTGCGGCCCAAGACGCTGGACGAGGGGAAGCAATACCGGGCTCTTCCGCGG
AGGATCGCGCCCATTTGGCCGCAAGATAGTACCGTCGACATCGTCGTCACCCTATCACCGTCGTTCAAGCCCATG
GCCATTGCCGATACGCCCTCCGAGTACGTTGTTCTGCGGGAAGAGGGCTTCCACATGGACAACAAGTCGGACGTA
CGCTCCATAGACACCACTTTCAACGTGCCCAAGGACGTGCAGAACAACGGCACGCTCTGGGGTCACTTCTACATC
GGCCTCACCGGCAGCCAACTCGACCCGCGCGAACCCGGCTTCGACTCGGAGAGGGCCTATCACTTTGCCCACCCG
CTGACCCAATATCTCGCCAAGAAGAAGGTGGCCAAGACGCGCAACCTGCTCGATTCCCGGTCCGAGGCCGAGCCG
GAAGAGCCGAAGCCGGTCGGCCCCATCATCACCAGCCACTACCACCCCAACGCCAGCTTCGCGTTCGTGCCGGCC
ATGGGCGTCAAGGACTTTTCGCAGCTGCATCCGGCCATTCGGCAGTTTCTACGACTCGAGGCGACGGGCGCACGG
GATGGCAGCGGTGAGAATGGATGGTATTACCCGTTGCTGTTTGTCAACACGTTTTGGCAGCTCAGCAGCCACATG
ACGGTGCTCAACGACACGGTCAAGGAGCTCCCGCTGCACATAGAGCTCAAGAACATGGCGTTTTGGCAGTTCCAA
GTGCTGGCGTCCATCGAGATGAACTCCAAGGAGAACGCACGACAGGCAGCTTTTGGAGCGTCTCTGCCCGGCGGT
GGCGACGGAACCGAGATTGAGATGGTCAAGGAAATCTTTATGGACACGAACCCGATCCTGCTGGCGATTACGGCA
GTGGTGACGGTGGCGCATCTGATTCTCGAGACGCTGGCCTTTGGATCGGACATTGCGCACTACCGCAAGAAAAAG
GACAACGTCGGCATCTCGGTGCGATCGATTCTGGCCAACGTGGTGATGCAGGCCATCATCTTCCTGTACCTCCTC
GACAACTCGCAGAACACGAGCTGGATGATTCTGGGCACGCAGGGCATCGGCATCGTCATCGAGCTGTGGAAGATG
ACGACGGTGGTGGACGTGCGGCTTCGTCCAGCGGCTCCGGGCTCGCTAATTCCCTGGCGGCTGACGATGGAGGAC
AAGCACCAGCTGACGGAGACGGAGGCCAAGACCAAGGAGTACGACGAGGTTGCATTCCGATACATGTACGCGGTG
GCGGTGCCGCTGCTGGCGGCGTACGGCATCTACTCGCTCGTGTACGACACGCACAAGTCGTGGTACTCGTTCGTC
ATCACCACACTGGTGGGCTCGGTGTACGCGTACGGCTTCTTGATGATGGTGCCGTCGCTGTACATCAACTACCGG
CTCAAGAGCGTGGCGCACATGCCGGGCAAGGCCATGATGTACAAGTTTCTCAACACCTTCATCGACGACCTGTTT
GCGTTTACCATCAAGATGCCGGTGCTGCATCGGCTGGCGACGTTTCGGGACGACGTCATCTTCTTTGTCTACCTG
TACCAGCGGTGGGCTTACCGGACGGATTATTCGCGGGTGAATGAGTTTGGGCAGGGGGGTGGCGAGGACGAGGGG
GAGAAGAAGGAGGTGAAGAAGGATGGGGAGGAGGAAGAGGAGAAGCTGGGGGAGGTCAAGGACGAGGGTAAGGCT
ACGGGGCGGGAGGGCGGACAGGCGACGAGGCGGCGGTGA
Transcript >Ophun1|2485
ATGTCGTCTTCAGTCGGCCAACGGAAGCCGGAGACGCAGCCGGTAGCGGCGCCTCCGCAGCAGCAGCAGCAGAGG
GGAGGCGGCTTCAACTTCAACCGGCTGGTGCTCGGCATCGCCATCTACATCGGGCTGAACTTTGCGCTCTCGGCT
TTTATGGGCAAGGGACAGCGCTCTGTCTCCGTTACGGATCCTGCCACGGGAGAGCCTGTGGCTGTGGCGAGCAAT
ATGGAGGGTATCCCGCCTTTTCAGCTGCGGCCCAAGACGCTGGACGAGGGGAAGCAATACCGGGCTCTTCCGCGG
AGGATCGCGCCCATTTGGCCGCAAGATAGTACCGTCGACATCGTCGTCACCCTATCACCGTCGTTCAAGCCCATG
GCCATTGCCGATACGCCCTCCGAGTACGTTGTTCTGCGGGAAGAGGGCTTCCACATGGACAACAAGTCGGACGTA
CGCTCCATAGACACCACTTTCAACGTGCCCAAGGACGTGCAGAACAACGGCACGCTCTGGGGTCACTTCTACATC
GGCCTCACCGGCAGCCAACTCGACCCGCGCGAACCCGGCTTCGACTCGGAGAGGGCCTATCACTTTGCCCACCCG
CTGACCCAATATCTCGCCAAGAAGAAGGTGGCCAAGACGCGCAACCTGCTCGATTCCCGGTCCGAGGCCGAGCCG
GAAGAGCCGAAGCCGGTCGGCCCCATCATCACCAGCCACTACCACCCCAACGCCAGCTTCGCGTTCGTGCCGGCC
ATGGGCGTCAAGGACTTTTCGCAGCTGCATCCGGCCATTCGGCAGTTTCTACGACTCGAGGCGACGGGCGCACGG
GATGGCAGCGGTGAGAATGGATGGTATTACCCGTTGCTGTTTGTCAACACGTTTTGGCAGCTCAGCAGCCACATG
ACGGTGCTCAACGACACGGTCAAGGAGCTCCCGCTGCACATAGAGCTCAAGAACATGGCGTTTTGGCAGTTCCAA
GTGCTGGCGTCCATCGAGATGAACTCCAAGGAGAACGCACGACAGGCAGCTTTTGGAGCGTCTCTGCCCGGCGGT
GGCGACGGAACCGAGATTGAGATGGTCAAGGAAATCTTTATGGACACGAACCCGATCCTGCTGGCGATTACGGCA
GTGGTGACGGTGGCGCATCTGATTCTCGAGACGCTGGCCTTTGGATCGGACATTGCGCACTACCGCAAGAAAAAG
GACAACGTCGGCATCTCGGTGCGATCGATTCTGGCCAACGTGGTGATGCAGGCCATCATCTTCCTGTACCTCCTC
GACAACTCGCAGAACACGAGCTGGATGATTCTGGGCACGCAGGGCATCGGCATCGTCATCGAGCTGTGGAAGATG
ACGACGGTGGTGGACGTGCGGCTTCGTCCAGCGGCTCCGGGCTCGCTAATTCCCTGGCGGCTGACGATGGAGGAC
AAGCACCAGCTGACGGAGACGGAGGCCAAGACCAAGGAGTACGACGAGGTTGCATTCCGATACATGTACGCGGTG
GCGGTGCCGCTGCTGGCGGCGTACGGCATCTACTCGCTCGTGTACGACACGCACAAGTCGTGGTACTCGTTCGTC
ATCACCACACTGGTGGGCTCGGTGTACGCGTACGGCTTCTTGATGATGGTGCCGTCGCTGTACATCAACTACCGG
CTCAAGAGCGTGGCGCACATGCCGGGCAAGGCCATGATGTACAAGTTTCTCAACACCTTCATCGACGACCTGTTT
GCGTTTACCATCAAGATGCCGGTGCTGCATCGGCTGGCGACGTTTCGGGACGACGTCATCTTCTTTGTCTACCTG
TACCAGCGGTGGGCTTACCGGACGGATTATTCGCGGGTGAATGAGTTTGGGCAGGGGGGTGGCGAGGACGAGGGG
GAGAAGAAGGAGGTGAAGAAGGATGGGGAGGAGGAAGAGGAGAAGCTGGGGGAGGTCAAGGACGAGGGTAAGGCT
ACGGGGCGGGAGGGCGGACAGGCGACGAGGCGGCGGTGA
Gene >Ophun1|2485
ATGTCGTCTTCAGTCGGCCAACGGAAGCCGGAGACGCAGCCGGTAGCGGCGCCTCCGCAGCAGCAGCAGCAGAGG
GGAGGCGTGAGTCGGGAAGATGGACTCGGACTTGCAGGGCCCCCGCTGACGGAGAGTCTCAGGGCTTCAACTTCA
ACCGGCTGGTGCTCGGCATCGCCATCTACATCGGGCTGAACTTTGCGCTCTCGGCTTTTATGGGCAAGGGACAGC
GCTCTGTCTCCGTTACGGATCCTGCCACGGGAGAGCCTGTGGCTGTGGCGAGCAATATGGAGGGTATCCCGCCTT
TTCAGCTGCGGCCCAAGACGCTGGACGAGGGGAAGCAATACCGGGCTCTTCCGCGGAGGATCGCGCCCATTTGGC
CGCAAGATAGTACCGTCGACATCGTCGTCACCCTATCACCGTCGTTCAAGCCCATGGCCATTGCCGATACGCCCT
CCGAGTACGTTGTTCTGCGGGAAGAGGGCTTCCACATGGACAACAAGTCGGACGTACGCTCCATAGACACCACTT
TCAACGTGCCCAAGGACGTGCAGAACAACGGCACGCTCTGGGGTCACTTCTACATCGGCCTCACCGGCAGCCAAC
TCGACCCGCGCGAACCCGGCTTCGACTCGGAGAGGGCCTATCACTTTGCCCACCCGCTGACCCAATATCTCGCCA
AGAAGAAGGTGGCCAAGACGCGCAACCTGCTCGATTCCCGGTCCGAGGCCGAGCCGGAAGAGCCGAAGCCGGTCG
GCCCCATCATCACCAGCCACTACCACCCCAACGCCAGCTTCGCGTTCGTGCCGGCCATGGGCGTCAAGGACTTTT
CGCAGCTGCATCCGGCCATTCGGCAGTTTCTACGACTCGAGGCGACGGGCGCACGGGATGGCAGCGGTGAGAATG
GATGGTATTGTGCGTTGTTTCCCCCCTTTCGTTGCTCATCGAGCCTGGGCTGATTCGGATGACAAGACCCGTTGC
TGTTTGTCAACACGTTTTGGCAGCTCAGCAGCCACATGACGGTGCTCAACGACACGGTCAAGGAGCTCCCGCTGC
ACATAGAGCTCAAGAACATGGCGTTTTGGCAGTTCCAAGTGCTGGCGTCCATCGAGATGAACTCCAAGGAGAACG
CACGACAGGCAGCTTTTGGAGCGTCTCTGCCCGGCGGTGGCGACGGAACCGAGATTGAGATGGTCAAGGAAATCT
TTATGGACACGAACCCGATCCTGCTGGCGATTACGGCAGTGGTGACGGTGGCGCATCTGATTCTCGAGACGCTGG
CCTTTGGATCGGACATTGCGCACTACCGCAAGAAAAAGGACAACGTCGGCATCTCGGTGCGATCGATTCTGGCCA
ACGTGGTGATGCAGGCCATCATCTTCCTGTACCTCCTCGACAACTCGCAGAACACGAGCTGGATGATTCTGGGCA
CGCAGGGCATCGGCATCGTCATCGAGCTGTGGAAGATGACGACGGTGGTGGACGTGCGGCTTCGTCCAGCGGCTC
CGGGCTCGCTAATTCCCTGGCGGCTGACGATGGAGGACAAGCACCAGCTGACGGAGACGGAGGCCAAGACCAAGG
AGTACGACGAGGTTGCATTCCGATACATGTACGCGGTGGCGGTGCCGCTGCTGGCGGCGTACGGCATCTACTCGC
TCGTGTACGACACGCACAAGTCGTGGTACTCGTTCGTCATCACCACACTGGTGGGCTCGGTGTACGCGTACGGCT
TCTTGATGATGGTGCCGTCGCTGTACATCAACTACCGGCTCAAGAGCGTGGCGCACATGCCGGGCAAGGCCATGA
TGTACAAGTTTCTCAACACCTTCATCGACGACCTGTTTGCGTTTACCATCAAGATGCCGGTGCTGCATCGGCTGG
CGACGTTTCGGGACGACGTCATCTTCTTTGTCTACCTGTACCAGCGGTGGGCTTACCGGACGGATTATTCGCGGG
TGAATGAGTTTGGGCAGGGGGGTGGCGAGGACGAGGGGGAGAAGAAGGAGGTGAAGAAGGATGGGGAGGAGGAAG
AGGAGAAGCTGGGGGAGGTCAAGGACGAGGGTAAGGCTACGGGGCGGGAGGGCGGACAGGCGACGAGGCGGCGGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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