Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2474
Gene name
LocationContig_223:8465..9507
Strand-
Gene length (bp)1042
Transcript length (bp)765
Coding sequence length (bp)765
Protein length (aa) 255

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 2.4E-22 67 231

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q24JP1|ALCS_ASPFU Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 55 249 2.0E-36
sp|B0YBR5|ALCS_ASPFC Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 55 249 2.0E-36
sp|Q460G9|ALCS_EMENI Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 55 239 3.0E-31
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 74 230 5.0E-11
sp|P32907|ATO2_YEAST Ammonia transport outward protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO2 PE=1 SV=1 69 201 6.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q24JP1|ALCS_ASPFU Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 55 249 2.0E-36
sp|B0YBR5|ALCS_ASPFC Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 55 249 2.0E-36
sp|Q460G9|ALCS_EMENI Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 55 239 3.0E-31
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 74 230 5.0E-11
sp|P32907|ATO2_YEAST Ammonia transport outward protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO2 PE=1 SV=1 69 201 6.0E-09
sp|P41943|GPR1_YARLI Glyoxylate pathway regulator OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPR1 PE=1 SV=3 69 186 1.0E-06
sp|O26317|Y215_METTH Uncharacterized protein MTH_215 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_215 PE=3 SV=1 73 184 5.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 88 110 22
3 139 161 22
4 168 190 22
5 218 240 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2474
MSSQQAPQQGPTLAPPGATQPADLSPEMYARLPIVFHKMMKMEMRKNFGCATLIFMGWRQTSGLGAATIGTFFFQ
GGVMMIIGSVLEWVLGNSFFAVVFATYGGFWLSYAATLNPSFAAFSSYAGPTAHSPAEGLATPGFLSSLAFWLLF
MGLITFIFFLCSMFMSFVFMILFLSLCITFLLLTGALFALANDPVGNARVGSRCIVGAGSSLFVTSMSGWYVFTS
ILFSVLGLPIKLPLLEFSCGRRSKEEVEV*
Coding >Ophun1|2474
ATGTCGTCACAACAAGCCCCCCAACAGGGTCCAACCCTCGCTCCCCCGGGTGCCACACAGCCAGCCGATCTCAGC
CCCGAGATGTACGCCAGGCTGCCCATCGTCTTCCACAAGATGATGAAGATGGAGATGCGCAAGAACTTTGGCTGC
GCGACTCTCATTTTCATGGGCTGGCGGCAGACGAGTGGTCTCGGAGCCGCAACCATAGGCACCTTCTTCTTTCAA
GGAGGCGTCATGATGATCATCGGCAGCGTGCTCGAGTGGGTTCTCGGCAACAGCTTCTTCGCCGTCGTCTTCGCC
ACTTACGGAGGCTTCTGGCTATCCTACGCCGCGACGCTGAACCCATCCTTTGCCGCCTTTAGCTCCTACGCTGGG
CCAACCGCACATTCTCCGGCCGAGGGTCTGGCCACGCCTGGTTTCCTGTCGTCTCTCGCGTTCTGGCTGCTGTTC
ATGGGCCTCATCACCTTCATCTTCTTCTTGTGCTCCATGTTCATGAGCTTCGTCTTCATGATTCTCTTTCTCAGC
TTGTGCATCACTTTCCTCCTCCTCACAGGTGCGCTCTTCGCCCTGGCCAACGACCCCGTTGGAAATGCCCGGGTC
GGCAGTCGGTGTATCGTGGGCGCCGGCTCCAGCCTCTTTGTAACGTCGATGAGTGGCTGGTACGTCTTTACCTCC
ATCCTCTTCTCCGTCCTCGGCCTTCCCATCAAGCTCCCCCTGCTGGAGTTTAGTTGCGGGAGAAGAAGCAAGGAA
GAAGTCGAGGTGTAG
Transcript >Ophun1|2474
ATGTCGTCACAACAAGCCCCCCAACAGGGTCCAACCCTCGCTCCCCCGGGTGCCACACAGCCAGCCGATCTCAGC
CCCGAGATGTACGCCAGGCTGCCCATCGTCTTCCACAAGATGATGAAGATGGAGATGCGCAAGAACTTTGGCTGC
GCGACTCTCATTTTCATGGGCTGGCGGCAGACGAGTGGTCTCGGAGCCGCAACCATAGGCACCTTCTTCTTTCAA
GGAGGCGTCATGATGATCATCGGCAGCGTGCTCGAGTGGGTTCTCGGCAACAGCTTCTTCGCCGTCGTCTTCGCC
ACTTACGGAGGCTTCTGGCTATCCTACGCCGCGACGCTGAACCCATCCTTTGCCGCCTTTAGCTCCTACGCTGGG
CCAACCGCACATTCTCCGGCCGAGGGTCTGGCCACGCCTGGTTTCCTGTCGTCTCTCGCGTTCTGGCTGCTGTTC
ATGGGCCTCATCACCTTCATCTTCTTCTTGTGCTCCATGTTCATGAGCTTCGTCTTCATGATTCTCTTTCTCAGC
TTGTGCATCACTTTCCTCCTCCTCACAGGTGCGCTCTTCGCCCTGGCCAACGACCCCGTTGGAAATGCCCGGGTC
GGCAGTCGGTGTATCGTGGGCGCCGGCTCCAGCCTCTTTGTAACGTCGATGAGTGGCTGGTACGTCTTTACCTCC
ATCCTCTTCTCCGTCCTCGGCCTTCCCATCAAGCTCCCCCTGCTGGAGTTTAGTTGCGGGAGAAGAAGCAAGGAA
GAAGTCGAGGTGTAG
Gene >Ophun1|2474
ATGTCGTCACAACAAGCCCCCCAACAGGGTCCAACCCTCGCTCCCCCGGGTGCCACACAGCCAGCCGATCTCAGC
CCCGAGATGTACGCCAGGCTGCCCATCGTCTTCCACAAGATGATGAAGATGGAGATGCGCAAGAACTTTGGCTGC
GCGACTCTCATGTGAGTCCCTATCACAACAGCAGATGACCCTGGCTCATACCTCGTCGTCAGCGCACTCGCCGGT
TTCCTCTTGTCTCTAAGTCCTCTGGCCTGTAGTTTCATGGGCTGGCGGCAGACGAGTGGTCTCGGAGCCGCAACC
ATGTAAGTGAGCCCCCTCTTGATCCCCTCCCCTGAACAGGTGGAATGCTAACGACAACAGAGGCACCTTCTTCTT
TCAAGGAGGCGTCATGATGATCATCGGCAGCGTGCTCGAGTGGGTTCTCGGCAACAGCTTCTTCGCCGTCGTCTT
CGCCACTTACGGAGGCTTCTGGCTATCCTACGCCGCGACGCTGAACCCATCCTTTGCCGCCTTTAGCTCCTACGC
TGGGCCAACCGCACATTCTCCGGCCGAGGGTCTGGCCACGCCTGGTTTCCTGTCGTCTCTCGGTTCGTTCTGACT
TCCATTGAACCCTTGTATGGGCTTCAGCTAAAAGCGAGTCTAGCGTTCTGGCTGCTGTTCATGGGCCTCATCACC
TTCATCTTCTTCTTGTGCTCCATGTTCATGAGCTTCGTCTTCATGATTCTCTTTCTCAGCTTGTGCATCACTTTC
CTCCTCCTCACAGGTGCGCTCTTCGCCCTGGCCAACGACCCCGTTGGAAATGCCCGGGTCGGCAGTCGGTGTATC
GTGGTGAGTCTATCTCGAAGATTCCCATCTTACATGTATTCAAGCAGCATCGATGCTAACTACGAGAAAGGGCGC
CGGCTCCAGCCTCTTTGTAACGTCGATGAGTGGCTGGTACGTCTTTACCTCCATCCTCTTCTCCGTCCTCGGCCT
TCCCATCAAGCTCCCCCTGCTGGAGTTTAGTTGCGGGAGAAGAAGCAAGGAAGAAGTCGAGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail