Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2468
Gene name
LocationContig_222:23527..25388
Strand+
Gene length (bp)1861
Transcript length (bp)1737
Coding sequence length (bp)1737
Protein length (aa) 579

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08375 Rpn3_C Proteasome regulatory subunit C-terminal 2.4E-26 504 567
PF01399 PCI PCI domain 5.1E-20 399 497

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn3 PE=3 SV=2 76 572 7.0E-142
sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2 89 567 5.0E-125
sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus GN=Psmd3 PE=1 SV=3 65 567 6.0E-125
sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus GN=PSMD3 PE=2 SV=1 89 567 7.0E-125
sp|O61470|PSMD3_ANOGA Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2 63 567 1.0E-120
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Swissprot ID Swissprot Description Start End E-value
sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn3 PE=3 SV=2 76 572 7.0E-142
sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2 89 567 5.0E-125
sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus GN=Psmd3 PE=1 SV=3 65 567 6.0E-125
sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus GN=PSMD3 PE=2 SV=1 89 567 7.0E-125
sp|O61470|PSMD3_ANOGA Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2 63 567 1.0E-120
sp|Q9U5Z8|PSMD3_ANOST Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1 63 568 6.0E-117
sp|P25161|PSMD3_DROME Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Drosophila melanogaster GN=Rpn3 PE=2 SV=1 66 567 2.0E-116
sp|Q1ZXD3|PSMD3_DICDI 26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium discoideum GN=psmD3 PE=1 SV=1 66 575 6.0E-114
sp|P40016|RPN3_YEAST 26S proteasome regulatory subunit RPN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN3 PE=1 SV=5 65 575 2.0E-89
sp|Q9LNU4|PSD3A_ARATH 26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana GN=RPN3A PE=1 SV=3 89 568 9.0E-89
sp|P93768|PSMD3_TOBAC Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum GN=21D7 PE=2 SV=1 167 568 2.0E-85
sp|Q06364|PSMD3_DAUCA Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2 105 568 1.0E-84
sp|Q9LQR8|PSD3B_ARATH 26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana GN=RPN3B PE=1 SV=2 67 568 3.0E-84
sp|Q04908|PSMD3_CAEEL 26S proteasome non-ATPase regulatory subunit 3 OS=Caenorhabditis elegans GN=rpn-3 PE=1 SV=1 86 571 2.0E-81
sp|Q8SRT7|RPN3_ENCCU 26S proteasome regulatory subunit RPN3 OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPN3 PE=1 SV=1 306 536 1.0E-12
sp|O88543|CSN3_MOUSE COP9 signalosome complex subunit 3 OS=Mus musculus GN=Cops3 PE=1 SV=3 328 533 3.0E-07
sp|Q68FW9|CSN3_RAT COP9 signalosome complex subunit 3 OS=Rattus norvegicus GN=Cops3 PE=1 SV=1 328 533 6.0E-07
sp|Q5RFS2|CSN3_PONAB COP9 signalosome complex subunit 3 OS=Pongo abelii GN=COPS3 PE=2 SV=1 328 533 6.0E-07
sp|Q4R898|CSN3_MACFA COP9 signalosome complex subunit 3 OS=Macaca fascicularis GN=COPS3 PE=2 SV=1 328 533 6.0E-07
sp|Q9UNS2|CSN3_HUMAN COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3 328 533 6.0E-07
sp|A6H7B5|CSN3_BOVIN COP9 signalosome complex subunit 3 OS=Bos taurus GN=COPS3 PE=2 SV=1 328 533 1.0E-06
sp|Q54E53|CSN3_DICDI COP9 signalosome complex subunit 3 OS=Dictyostelium discoideum GN=csn3 PE=1 SV=1 326 507 4.0E-06
sp|Q5ZJF1|CSN3_CHICK COP9 signalosome complex subunit 3 OS=Gallus gallus GN=COPS3 PE=2 SV=1 328 533 9.0E-06
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GO

GO Term Description Terminal node
GO:0030234 enzyme regulator activity Yes
GO:0000502 proteasome complex Yes
GO:0042176 regulation of protein catabolic process Yes
GO:0003674 molecular_function No
GO:1902494 catalytic complex No
GO:0060255 regulation of macromolecule metabolic process No
GO:0098772 molecular function regulator activity No
GO:0032991 protein-containing complex No
GO:0019222 regulation of metabolic process No
GO:0005575 cellular_component No
GO:1905369 endopeptidase complex No
GO:0050789 regulation of biological process No
GO:0140535 intracellular protein-containing complex No
GO:0008150 biological_process No
GO:0009894 regulation of catabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:1905368 peptidase complex No
GO:0065007 biological regulation No
GO:0080090 regulation of primary metabolic process No
GO:0051246 regulation of protein metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1762
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7216
Ophiocordyceps australis map64 (Brazil) OphauB2|1300
Ophiocordyceps camponoti-floridani Ophcf2|05185
Ophiocordyceps camponoti-rufipedis Ophun1|2468 (this protein)
Ophiocordyceps kimflemingae Ophio5|3244
Ophiocordyceps subramaniannii Hirsu2|1669

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2468
MPGKTPKGNGDEPVGNGVRSNDDVDMKDAAKTKGKKASKDGDDEMTVVLPPSKASKQPSRSQDPDGDVSMADDAD
GEAKVDPAQQAVADIKSNFALLDRAVALFDARFSLRALRSISLIRKRLTPDIIGQAIVDTFPATVTSGNIAKHLL
VAIGRESMPLGRQPGPETEMDIDGKPPKNGAAKKEAKEIIPEIDVFLGILIQVYLFDSKQYQKGADFSRYLAERI
QALNRRTLDSLSAKAFFYYSLFCEHLAPLPPSPESPIVAIRPTLLAALRTAVLRKDIDTQASVIVLLLRNYLLTS
HINQADLLVSHTQFPENAVNNQVARFLYYLGRIKAIQLRYTEAHEHLTAATRKAPSSACAVGFSQTATKLLLVVE
LLMGDIPDRATFRLPSLEEALHPYLLLVQAVRVGNLEDFETTIADHADTFRRDGTYTLILRLRQNVIKTGIRMMS
LSYSRISLRDICIRLHLGSEESAEYIVAKAIRDGVIEATLDRERGFMKSNEVGDVYATREPGEAFHDRIQACLAL
HNESVKAMRFPMNQHRLELKNAQEAREREREMAKEIQEGDLDEDDLGGDFEGM*
Coding >Ophun1|2468
ATGCCCGGCAAGACCCCCAAAGGCAATGGCGATGAGCCGGTTGGGAACGGAGTCAGGAGCAACGACGACGTTGAC
ATGAAGGACGCCGCAAAGACAAAGGGAAAGAAAGCTTCCAAGGACGGCGACGACGAGATGACTGTAGTCTTGCCT
CCATCCAAGGCTTCCAAGCAACCCAGTCGCTCGCAGGATCCCGACGGTGACGTATCCATGGCGGACGACGCCGAC
GGCGAGGCAAAGGTCGATCCCGCCCAGCAGGCCGTGGCAGATATTAAGAGCAATTTTGCCTTGCTTGACCGTGCC
GTCGCCCTATTCGATGCCAGATTTTCCCTCCGAGCCCTGCGTTCCATCTCCCTGATCCGCAAGCGCCTGACGCCC
GACATCATCGGACAGGCTATTGTCGACACCTTTCCCGCCACCGTGACGTCTGGAAACATTGCCAAGCACCTCCTG
GTCGCCATCGGCCGCGAGAGCATGCCACTCGGACGGCAGCCCGGACCTGAAACGGAGATGGACATTGACGGAAAG
CCACCCAAGAACGGTGCCGCGAAGAAGGAGGCCAAGGAAATCATTCCCGAAATCGACGTCTTTCTCGGCATCCTC
ATCCAGGTCTACCTATTCGACAGCAAGCAGTATCAAAAGGGAGCAGACTTTTCCCGATATCTGGCGGAGCGGATC
CAGGCGCTCAACCGCCGCACTCTCGATTCACTCTCCGCCAAGGCCTTCTTCTACTACTCTCTCTTCTGCGAGCAC
CTCGCGCCGCTGCCGCCGTCGCCCGAGTCGCCCATTGTCGCCATCCGACCGACGCTACTGGCAGCTCTACGGACG
GCGGTGCTGCGCAAGGATATCGACACGCAGGCTTCGGTCATTGTCCTGCTCCTGCGCAACTACCTGCTGACGTCG
CACATCAACCAAGCCGATCTTCTCGTCTCGCACACGCAGTTTCCGGAGAACGCGGTCAACAACCAGGTGGCCCGC
TTCCTCTACTACCTCGGCAGGATCAAGGCGATCCAGCTCCGGTACACGGAGGCGCACGAGCACCTGACGGCGGCG
ACACGCAAGGCACCCTCGAGCGCCTGCGCCGTCGGCTTCTCTCAGACGGCGACCAAGCTGCTGCTGGTGGTGGAG
CTGCTCATGGGCGACATTCCCGACCGGGCCACGTTCCGTCTGCCGTCGCTGGAAGAGGCGCTGCACCCGTACCTT
TTGCTGGTGCAGGCCGTCCGCGTCGGCAACCTGGAGGATTTTGAGACGACCATTGCCGACCATGCCGACACGTTT
CGACGCGACGGCACCTACACGCTCATCCTGCGCCTCCGACAGAACGTCATCAAGACGGGCATCCGCATGATGTCG
CTGTCGTACTCGCGCATCTCTTTACGCGACATATGTATCCGGCTCCATCTCGGCAGCGAGGAGTCGGCAGAGTAC
ATTGTGGCCAAGGCGATCCGCGACGGCGTCATCGAGGCCACGCTCGACCGGGAGCGCGGCTTCATGAAGAGCAAC
GAGGTCGGCGACGTGTACGCGACGAGGGAACCGGGCGAGGCCTTTCACGACCGAATCCAAGCGTGCCTCGCGCTG
CACAATGAGAGCGTCAAGGCCATGCGTTTCCCCATGAACCAACACCGACTCGAACTCAAGAATGCTCAAGAAGCG
AGAGAGCGCGAGAGGGAGATGGCCAAGGAGATACAGGAGGGCGACCTGGACGAAGACGACCTCGGCGGCGACTTT
GAGGGCATGTAA
Transcript >Ophun1|2468
ATGCCCGGCAAGACCCCCAAAGGCAATGGCGATGAGCCGGTTGGGAACGGAGTCAGGAGCAACGACGACGTTGAC
ATGAAGGACGCCGCAAAGACAAAGGGAAAGAAAGCTTCCAAGGACGGCGACGACGAGATGACTGTAGTCTTGCCT
CCATCCAAGGCTTCCAAGCAACCCAGTCGCTCGCAGGATCCCGACGGTGACGTATCCATGGCGGACGACGCCGAC
GGCGAGGCAAAGGTCGATCCCGCCCAGCAGGCCGTGGCAGATATTAAGAGCAATTTTGCCTTGCTTGACCGTGCC
GTCGCCCTATTCGATGCCAGATTTTCCCTCCGAGCCCTGCGTTCCATCTCCCTGATCCGCAAGCGCCTGACGCCC
GACATCATCGGACAGGCTATTGTCGACACCTTTCCCGCCACCGTGACGTCTGGAAACATTGCCAAGCACCTCCTG
GTCGCCATCGGCCGCGAGAGCATGCCACTCGGACGGCAGCCCGGACCTGAAACGGAGATGGACATTGACGGAAAG
CCACCCAAGAACGGTGCCGCGAAGAAGGAGGCCAAGGAAATCATTCCCGAAATCGACGTCTTTCTCGGCATCCTC
ATCCAGGTCTACCTATTCGACAGCAAGCAGTATCAAAAGGGAGCAGACTTTTCCCGATATCTGGCGGAGCGGATC
CAGGCGCTCAACCGCCGCACTCTCGATTCACTCTCCGCCAAGGCCTTCTTCTACTACTCTCTCTTCTGCGAGCAC
CTCGCGCCGCTGCCGCCGTCGCCCGAGTCGCCCATTGTCGCCATCCGACCGACGCTACTGGCAGCTCTACGGACG
GCGGTGCTGCGCAAGGATATCGACACGCAGGCTTCGGTCATTGTCCTGCTCCTGCGCAACTACCTGCTGACGTCG
CACATCAACCAAGCCGATCTTCTCGTCTCGCACACGCAGTTTCCGGAGAACGCGGTCAACAACCAGGTGGCCCGC
TTCCTCTACTACCTCGGCAGGATCAAGGCGATCCAGCTCCGGTACACGGAGGCGCACGAGCACCTGACGGCGGCG
ACACGCAAGGCACCCTCGAGCGCCTGCGCCGTCGGCTTCTCTCAGACGGCGACCAAGCTGCTGCTGGTGGTGGAG
CTGCTCATGGGCGACATTCCCGACCGGGCCACGTTCCGTCTGCCGTCGCTGGAAGAGGCGCTGCACCCGTACCTT
TTGCTGGTGCAGGCCGTCCGCGTCGGCAACCTGGAGGATTTTGAGACGACCATTGCCGACCATGCCGACACGTTT
CGACGCGACGGCACCTACACGCTCATCCTGCGCCTCCGACAGAACGTCATCAAGACGGGCATCCGCATGATGTCG
CTGTCGTACTCGCGCATCTCTTTACGCGACATATGTATCCGGCTCCATCTCGGCAGCGAGGAGTCGGCAGAGTAC
ATTGTGGCCAAGGCGATCCGCGACGGCGTCATCGAGGCCACGCTCGACCGGGAGCGCGGCTTCATGAAGAGCAAC
GAGGTCGGCGACGTGTACGCGACGAGGGAACCGGGCGAGGCCTTTCACGACCGAATCCAAGCGTGCCTCGCGCTG
CACAATGAGAGCGTCAAGGCCATGCGTTTCCCCATGAACCAACACCGACTCGAACTCAAGAATGCTCAAGAAGCG
AGAGAGCGCGAGAGGGAGATGGCCAAGGAGATACAGGAGGGCGACCTGGACGAAGACGACCTCGGCGGCGACTTT
GAGGGCATGTAA
Gene >Ophun1|2468
ATGCCCGGCAAGACCCCCAAAGGCAATGGCGATGAGCCGGTTGGGAACGGAGTCAGGAGCAACGACGACGTTGAC
ATGAAGGACGCCGCAAAGACAAAGGGAAAGAAAGCTTCCAAGGACGGCGACGACGAGATGACTGTAGTCTTGCCT
CCATCCAAGGCTTCCAAGCAACCCAGTCGCTCGCAGGATCCCGACGGTGACGTATCCATGGCGGACGACGCCGAC
GGCGAGGCAAAGGTCGATCCCGCCCAGCAGGCCGTGGCAGGTATGTTACGGATATCTCCATCTTTCAATGTTGCA
TGGCTGACTGACTGACGTGTCGCTGCAGATATTAAGAGCAATTTTGCCTTGCTTGACCGTGCCGTCGCCCTATTC
GATGCCAGATTTTCCCTCCGAGCCCTGCGTTCCATCTCCCTGATCCGCAAGCGCCTGACGCCCGACATCATCGGA
CAGGCTATTGTCGACACCTTTCCCGCCACCGTGACGTCTGGAAACATTGCCAAGCACCTCCTGGTCGCCATCGGC
CGCGAGAGCATGCCACTCGGACGGCAGCCCGGACCTGAAACGGAGATGGACATTGACGGAAAGCCACCCAAGAAC
GGTGCCGCGAAGAAGGAGGCCAAGGAAATCATTCCCGAAATCGACGTCTTTCTCGGCATCCTCATCCAGGTCTAC
CTATTCGACAGCAAGCAGTATCAAAAGGGAGCAGACTTTTCCCGATATCTGGCGGAGCGGATCCAGGCGCTCAAC
CGCCGCACTCTCGATTCACTCTCCGCCAAGGCCTTCTTCTACTACTCTCTCTTCTGCGAGCACCTCGCGCCGCTG
CCGCCGTCGCCCGAGTCGCCCATTGTCGCCATCCGACCGACGCTACTGGCAGCTCTACGGACGGCGGTGCTGCGC
AAGGATATCGACACGCAGGCTTCGGTCATTGTCCTGCTCCTGCGCAACTACCTGCTGACGTCGCACATCAACCAA
GCCGATCTTCTCGTCTCGCACACGCAGTTTCCGGAGAACGCGGTCAACAACCAGGTGGCCCGCTTCCTCTACTAC
CTCGGCAGGATCAAGGCGATCCAGCTCCGGTACACGGAGGCGCACGAGCACCTGACGGCGGCGACACGCAAGGCA
CCCTCGAGCGCCTGCGCCGTCGGCTTCTCTCAGACGGCGACCAAGCTGCTGCTGGTGGTGGAGCTGCTCATGGGC
GACATTCCCGACCGGGCCACGTTCCGTCTGCCGTCGCTGGAAGAGGCGCTGCACCCGTACCTTTTGCTGGTGCAG
GCCGTCCGCGTCGGCAACCTGGAGGATTTTGAGACGACCATTGCCGACCATGCCGACACGTTTCGACGCGACGGC
ACCTACACGCTCATCCTGCGCCTCCGACAGAACGTCATCAAGACGGGCATCCGCATGATGTCGCTGTCGTACTCG
CGCATCTCTTTACGCGACATATGTATCCGGCTCCATCTCGGCAGCGAGGAGTCGGCAGAGTACATTGTGGCCAAG
GCGATCCGCGACGGCGTCATCGAGGCCACGCTCGACCGGGAGCGCGGCTTCATGAAGAGCAACGAGGTCGGCGAC
GTGTACGCGACGAGGGAACCGGGCGAGGCCTTTCACGACCGAATCCAAGCGTGCCTCGCGCTGCACAATGAGAGC
GTCAAGGTGAGGGTCCCTGCGTCGCGAATCTCTTTCTCGTCTCTCGTGTCCTGACCATGACTCGCAGGCCATGCG
TTTCCCCATGAACCAACACCGACTCGAACTCAAGAATGCTCAAGAAGCGAGAGAGCGCGAGAGGGAGATGGCCAA
GGAGATACAGGAGGGCGACCTGGACGAAGACGACCTCGGCGGCGACTTTGAGGGCATGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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