Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|236
Gene name
LocationContig_105:21260..22298
Strand+
Gene length (bp)1038
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00636 Ribonuclease_3 Ribonuclease III domain 3.8E-16 91 187
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 2.5E-09 71 188

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q02555|RNT1_YEAST Ribonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNT1 PE=1 SV=1 64 343 2.0E-16
sp|A3CP46|RNC_STRSV Ribonuclease 3 OS=Streptococcus sanguinis (strain SK36) GN=rnc PE=3 SV=1 71 200 2.0E-12
sp|Q97QG6|RNC_STRPN Ribonuclease 3 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=rnc PE=3 SV=1 71 187 9.0E-12
sp|C1CEK4|RNC_STRZJ Ribonuclease 3 OS=Streptococcus pneumoniae (strain JJA) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|B2IPN5|RNC_STRPS Ribonuclease 3 OS=Streptococcus pneumoniae (strain CGSP14) GN=rnc PE=3 SV=1 71 187 1.0E-11
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q02555|RNT1_YEAST Ribonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNT1 PE=1 SV=1 64 343 2.0E-16
sp|A3CP46|RNC_STRSV Ribonuclease 3 OS=Streptococcus sanguinis (strain SK36) GN=rnc PE=3 SV=1 71 200 2.0E-12
sp|Q97QG6|RNC_STRPN Ribonuclease 3 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=rnc PE=3 SV=1 71 187 9.0E-12
sp|C1CEK4|RNC_STRZJ Ribonuclease 3 OS=Streptococcus pneumoniae (strain JJA) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|B2IPN5|RNC_STRPS Ribonuclease 3 OS=Streptococcus pneumoniae (strain CGSP14) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|C1C7M6|RNC_STRP7 Ribonuclease 3 OS=Streptococcus pneumoniae (strain 70585) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|Q8DPJ8|RNC_STRR6 Ribonuclease 3 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|B5E4Y2|RNC_STRP4 Ribonuclease 3 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|Q04K72|RNC_STRP2 Ribonuclease 3 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|C1CKY7|RNC_STRZP Ribonuclease 3 OS=Streptococcus pneumoniae (strain P1031) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|B8ZJR8|RNC_STRPJ Ribonuclease 3 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|B1IC43|RNC_STRPI Ribonuclease 3 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rnc PE=3 SV=1 71 187 1.0E-11
sp|Q8E0K7|RNC_STRA5 Ribonuclease 3 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) GN=rnc PE=3 SV=2 71 186 1.0E-11
sp|Q8E680|RNC_STRA3 Ribonuclease 3 OS=Streptococcus agalactiae serotype III (strain NEM316) GN=rnc PE=3 SV=1 71 186 1.0E-11
sp|Q3K1Y2|RNC_STRA1 Ribonuclease 3 OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) GN=rnc PE=3 SV=1 71 186 1.0E-11
sp|C1CR56|RNC_STRZT Ribonuclease 3 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rnc PE=3 SV=1 71 187 2.0E-11
sp|Q6F1N5|RNC_MESFL Ribonuclease 3 OS=Mesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) GN=rnc PE=3 SV=1 68 307 3.0E-11
sp|B5XKB7|RNC_STRPZ Ribonuclease 3 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rnc PE=3 SV=1 68 204 8.0E-11
sp|A2RFW8|RNC_STRPG Ribonuclease 3 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rnc PE=3 SV=1 68 204 8.0E-11
sp|Q5XDA6|RNC_STRP6 Ribonuclease 3 OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=rnc PE=3 SV=1 68 204 8.0E-11
sp|Q1JI19|RNC_STRPD Ribonuclease 3 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|P0DF15|RNC_STRPQ Ribonuclease 3 OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|Q1J7V3|RNC_STRPF Ribonuclease 3 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|Q1JMX4|RNC_STRPC Ribonuclease 3 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|Q1JCZ9|RNC_STRPB Ribonuclease 3 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|P66672|RNC_STRP8 Ribonuclease 3 OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|P0DF14|RNC_STRP3 Ribonuclease 3 OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=rnc PE=3 SV=1 68 186 9.0E-11
sp|P66670|RNC_STRP1 Ribonuclease 3 OS=Streptococcus pyogenes serotype M1 GN=rnc PE=1 SV=1 68 186 9.0E-11
sp|C0MCR4|RNC_STRS7 Ribonuclease 3 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rnc PE=3 SV=1 71 186 1.0E-10
sp|Q48UR6|RNC_STRPM Ribonuclease 3 OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=rnc PE=3 SV=1 68 186 1.0E-10
sp|C0M8Y3|RNC_STRE4 Ribonuclease 3 OS=Streptococcus equi subsp. equi (strain 4047) GN=rnc PE=3 SV=1 71 186 2.0E-10
sp|Q9CHD0|RNC_LACLA Ribonuclease 3 OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=rnc PE=3 SV=1 71 186 2.0E-10
sp|Q030F9|RNC_LACLS Ribonuclease 3 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rnc PE=3 SV=1 71 186 2.0E-10
sp|A8AWC2|RNC_STRGC Ribonuclease 3 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rnc PE=3 SV=1 71 186 2.0E-10
sp|B9DRH1|RNC_STRU0 Ribonuclease 3 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rnc PE=3 SV=1 71 186 5.0E-10
sp|A2RLZ8|RNC_LACLM Ribonuclease 3 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rnc PE=3 SV=1 71 186 6.0E-10
sp|Q7MHN8|RNC_VIBVY Ribonuclease 3 OS=Vibrio vulnificus (strain YJ016) GN=rnc PE=3 SV=2 68 186 1.0E-09
sp|Q8DC76|RNC_VIBVU Ribonuclease 3 OS=Vibrio vulnificus (strain CMCP6) GN=rnc PE=3 SV=1 68 186 1.0E-09
sp|Q2SRZ8|RNC_MYCCT Ribonuclease 3 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=rnc PE=3 SV=1 68 311 2.0E-09
sp|C3LR04|RNC_VIBCM Ribonuclease 3 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rnc PE=3 SV=1 71 199 4.0E-09
sp|Q9KPB2|RNC_VIBCH Ribonuclease 3 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=rnc PE=3 SV=1 71 199 4.0E-09
sp|Q03K17|RNC_STRTD Ribonuclease 3 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rnc PE=3 SV=1 73 186 4.0E-09
sp|Q5M3S3|RNC_STRT2 Ribonuclease 3 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rnc PE=3 SV=1 73 186 5.0E-09
sp|Q5LZ68|RNC_STRT1 Ribonuclease 3 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rnc PE=3 SV=1 73 186 5.0E-09
sp|Q4FUV6|RNC_PSYA2 Ribonuclease 3 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rnc PE=3 SV=1 40 191 8.0E-09
sp|Q5E314|RNC_VIBF1 Ribonuclease 3 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rnc PE=3 SV=1 68 199 9.0E-09
sp|Q8DT66|RNC_STRMU Ribonuclease 3 OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=rnc PE=3 SV=1 71 180 1.0E-08
sp|Q82ZG1|RNC_ENTFA Ribonuclease 3 OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=rnc PE=3 SV=1 71 306 1.0E-08
sp|A5F5H8|RNC_VIBC3 Ribonuclease 3 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=rnc PE=3 SV=1 71 199 1.0E-08
sp|Q55637|RNC2_SYNY3 Ribonuclease 3 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rnc2 PE=3 SV=1 70 187 1.0E-08
sp|Q87LN9|RNC_VIBPA Ribonuclease 3 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=rnc PE=3 SV=1 68 199 2.0E-08
sp|Q9Z5U2|RNC_ZYMMO Ribonuclease 3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=rnc PE=3 SV=3 71 211 3.0E-08
sp|Q3IDL2|RNC_PSEHT Ribonuclease 3 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rnc PE=3 SV=2 71 199 3.0E-08
sp|Q8YPT4|RNC2_NOSS1 Ribonuclease 3 2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rnc2 PE=3 SV=2 65 187 4.0E-08
sp|O69161|RNC_BRADU Ribonuclease 3 OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=rnc PE=3 SV=2 71 204 4.0E-08
sp|A6TCI1|RNC_KLEP7 Ribonuclease 3 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rnc PE=3 SV=1 73 202 4.0E-08
sp|B5XNH0|RNC_KLEP3 Ribonuclease 3 OS=Klebsiella pneumoniae (strain 342) GN=rnc PE=3 SV=1 73 202 4.0E-08
sp|A7MZA8|RNC_VIBCB Ribonuclease 3 OS=Vibrio campbellii (strain ATCC BAA-1116 / BB120) GN=rnc PE=3 SV=1 68 199 4.0E-08
sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV=1 78 191 4.0E-08
sp|Q71YL2|RNC_LISMF Ribonuclease 3 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rnc PE=3 SV=1 71 201 4.0E-08
sp|C1KWA4|RNC_LISMC Ribonuclease 3 OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=rnc PE=3 SV=1 71 201 4.0E-08
sp|A5V230|RNC_ROSS1 Ribonuclease 3 OS=Roseiflexus sp. (strain RS-1) GN=rnc PE=3 SV=1 71 294 4.0E-08
sp|B7VK79|RNC_VIBTL Ribonuclease 3 OS=Vibrio tasmaniensis (strain LGP32) GN=rnc PE=3 SV=1 68 202 5.0E-08
sp|B8DDU8|RNC_LISMH Ribonuclease 3 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rnc PE=3 SV=1 71 201 5.0E-08
sp|A8Z6F6|RNC_CAMC1 Ribonuclease 3 OS=Campylobacter concisus (strain 13826) GN=rnc PE=3 SV=1 73 186 6.0E-08
sp|P22192|PAC1_SCHPO Double-strand-specific pac1 ribonuclease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pac1 PE=1 SV=1 64 203 6.0E-08
sp|Q6MTC9|RNC_MYCMS Ribonuclease 3 OS=Mycoplasma mycoides subsp. mycoides SC (strain PG1) GN=rnc PE=3 SV=1 78 311 7.0E-08
sp|A0AJR0|RNC_LISW6 Ribonuclease 3 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rnc PE=3 SV=1 71 201 8.0E-08
sp|A7NGC5|RNC_ROSCS Ribonuclease 3 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rnc PE=3 SV=1 89 261 9.0E-08
sp|B2VI46|RNC_ERWT9 Ribonuclease 3 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rnc PE=3 SV=1 73 199 9.0E-08
sp|Q74IP8|RNC_LACJO Ribonuclease 3 OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=rnc PE=3 SV=1 78 186 1.0E-07
sp|B4F047|RNC_PROMH Ribonuclease 3 OS=Proteus mirabilis (strain HI4320) GN=rnc PE=3 SV=1 73 191 1.0E-07
sp|C3K6Y7|RNC_PSEFS Ribonuclease 3 OS=Pseudomonas fluorescens (strain SBW25) GN=rnc PE=3 SV=1 71 186 1.0E-07
sp|Q7N1X5|RNC_PHOLL Ribonuclease 3 OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=rnc PE=3 SV=1 78 199 1.0E-07
sp|P57805|RNC_PASMU Ribonuclease 3 OS=Pasteurella multocida (strain Pm70) GN=rnc PE=3 SV=1 68 213 1.0E-07
sp|P74368|RNC1_SYNY3 Ribonuclease 3 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rnc1 PE=3 SV=1 64 204 1.0E-07
sp|B0VCU0|RNC_ACIBY Ribonuclease 3 OS=Acinetobacter baumannii (strain AYE) GN=rnc PE=3 SV=1 68 134 2.0E-07
sp|A3M7P2|RNC_ACIBT Ribonuclease 3 OS=Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) GN=rnc PE=3 SV=2 68 134 2.0E-07
sp|B0VTM5|RNC_ACIBS Ribonuclease 3 OS=Acinetobacter baumannii (strain SDF) GN=rnc PE=3 SV=1 68 134 2.0E-07
sp|B7GYT0|RNC_ACIB3 Ribonuclease 3 OS=Acinetobacter baumannii (strain AB307-0294) GN=rnc PE=3 SV=2 68 134 2.0E-07
sp|Q88WK0|RNC_LACPL Ribonuclease 3 OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=rnc PE=3 SV=1 71 187 2.0E-07
sp|Q6LMS2|RNC_PHOPR Ribonuclease 3 OS=Photobacterium profundum GN=rnc PE=3 SV=1 73 202 2.0E-07
sp|A7NAR0|RNC_FRATF Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rnc PE=3 SV=1 78 186 2.0E-07
sp|Q1GTU3|RNC_SPHAL Ribonuclease 3 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) GN=rnc PE=3 SV=1 71 211 2.0E-07
sp|B2SFY4|RNC_FRATM Ribonuclease 3 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=rnc PE=3 SV=1 78 186 3.0E-07
sp|Q2A4N2|RNC_FRATH Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rnc PE=3 SV=1 78 186 3.0E-07
sp|A0Q7W6|RNC_FRATN Ribonuclease 3 OS=Francisella tularensis subsp. novicida (strain U112) GN=rnc PE=3 SV=1 78 186 3.0E-07
sp|A7H186|RNC_CAMC5 Ribonuclease 3 OS=Campylobacter curvus (strain 525.92) GN=rnc PE=3 SV=1 61 186 3.0E-07
sp|A4IWK9|RNC_FRATW Ribonuclease 3 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rnc PE=3 SV=1 78 186 4.0E-07
sp|Q0BN07|RNC_FRATO Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rnc PE=3 SV=1 78 186 4.0E-07
sp|Q57LD0|RNC_SALCH Ribonuclease 3 OS=Salmonella choleraesuis (strain SC-B67) GN=rnc PE=3 SV=2 73 202 4.0E-07
sp|Q6F9C2|RNC_ACIAD Ribonuclease 3 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=rnc PE=3 SV=1 73 134 5.0E-07
sp|Q8Z4K4|RNC_SALTI Ribonuclease 3 OS=Salmonella typhi GN=rnc PE=3 SV=1 73 202 5.0E-07
sp|A5D1H6|RNC_PELTS Ribonuclease 3 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rnc PE=3 SV=1 78 311 5.0E-07
sp|Q56056|RNC_SALTY Ribonuclease 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=rnc PE=3 SV=2 73 202 5.0E-07
sp|B5BAT0|RNC_SALPK Ribonuclease 3 OS=Salmonella paratyphi A (strain AKU_12601) GN=rnc PE=3 SV=1 73 202 5.0E-07
sp|Q5PIG5|RNC_SALPA Ribonuclease 3 OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=rnc PE=3 SV=1 73 202 5.0E-07
sp|B5RD49|RNC_SALG2 Ribonuclease 3 OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rnc PE=3 SV=1 73 202 5.0E-07
sp|B5QTU8|RNC_SALEP Ribonuclease 3 OS=Salmonella enteritidis PT4 (strain P125109) GN=rnc PE=3 SV=1 73 202 5.0E-07
sp|C5B8Y2|RNC_EDWI9 Ribonuclease 3 OS=Edwardsiella ictaluri (strain 93-146) GN=rnc PE=3 SV=1 78 212 5.0E-07
sp|Q5FJJ7|RNC_LACAC Ribonuclease 3 OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN=rnc PE=3 SV=1 78 186 6.0E-07
sp|Q0VP19|RNC_ALCBS Ribonuclease 3 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) GN=rnc PE=3 SV=1 68 143 6.0E-07
sp|D4GKM1|RNC_PANAM Ribonuclease 3 OS=Pantoea ananatis (strain LMG 20103) GN=rnc PE=3 SV=2 73 202 7.0E-07
sp|Q6N6C1|RNC_RHOPA Ribonuclease 3 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=rnc PE=3 SV=1 71 210 7.0E-07
sp|B1J4E0|RNC_PSEPW Ribonuclease 3 OS=Pseudomonas putida (strain W619) GN=rnc PE=3 SV=1 77 200 8.0E-07
sp|Q3YYU9|RNC_SHISS Ribonuclease 3 OS=Shigella sonnei (strain Ss046) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|P0A7Y3|RNC_SHIFL Ribonuclease 3 OS=Shigella flexneri GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q0T1T8|RNC_SHIF8 Ribonuclease 3 OS=Shigella flexneri serotype 5b (strain 8401) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q32CV4|RNC_SHIDS Ribonuclease 3 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q31XS0|RNC_SHIBS Ribonuclease 3 OS=Shigella boydii serotype 4 (strain Sb227) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B2TXY0|RNC_SHIB3 Ribonuclease 3 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7LUZ7|RNC_ESCF3 Ribonuclease 3 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q1R8G6|RNC_ECOUT Ribonuclease 3 OS=Escherichia coli (strain UTI89 / UPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B1LP80|RNC_ECOSM Ribonuclease 3 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B6I5E1|RNC_ECOSE Ribonuclease 3 OS=Escherichia coli (strain SE11) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7N6F5|RNC_ECOLU Ribonuclease 3 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|P0A7Y0|RNC_ECOLI Ribonuclease 3 OS=Escherichia coli (strain K12) GN=rnc PE=1 SV=1 73 202 8.0E-07
sp|B1IVR0|RNC_ECOLC Ribonuclease 3 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|P0A7Y1|RNC_ECOL6 Ribonuclease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q0TES1|RNC_ECOL5 Ribonuclease 3 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|A1AE97|RNC_ECOK1 Ribonuclease 3 OS=Escherichia coli O1:K1 / APEC GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|A8A377|RNC_ECOHS Ribonuclease 3 OS=Escherichia coli O9:H4 (strain HS) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B1XB41|RNC_ECODH Ribonuclease 3 OS=Escherichia coli (strain K12 / DH10B) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|C4ZYJ0|RNC_ECOBW Ribonuclease 3 OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7M8I0|RNC_ECO8A Ribonuclease 3 OS=Escherichia coli O8 (strain IAI1) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7MYJ8|RNC_ECO81 Ribonuclease 3 OS=Escherichia coli O81 (strain ED1a) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7NRM0|RNC_ECO7I Ribonuclease 3 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B5Z141|RNC_ECO5E Ribonuclease 3 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|P0A7Y2|RNC_ECO57 Ribonuclease 3 OS=Escherichia coli O157:H7 GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7LDG0|RNC_ECO55 Ribonuclease 3 OS=Escherichia coli (strain 55989 / EAEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7MIQ2|RNC_ECO45 Ribonuclease 3 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|B7UH07|RNC_ECO27 Ribonuclease 3 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|A7ZQ11|RNC_ECO24 Ribonuclease 3 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rnc PE=3 SV=1 73 202 8.0E-07
sp|Q4KHT1|RNC_PSEF5 Ribonuclease 3 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rnc PE=3 SV=2 71 200 8.0E-07
sp|A4WDD8|RNC_ENT38 Ribonuclease 3 OS=Enterobacter sp. (strain 638) GN=rnc PE=3 SV=1 73 202 1.0E-06
sp|Q2SL32|RNC_HAHCH Ribonuclease 3 OS=Hahella chejuensis (strain KCTC 2396) GN=rnc PE=3 SV=1 71 149 1.0E-06
sp|Q7NH89|RNC_GLOVI Ribonuclease 3 OS=Gloeobacter violaceus (strain PCC 7421) GN=rnc PE=3 SV=1 67 193 1.0E-06
sp|Q6MEK1|RNC_PARUW Ribonuclease 3 OS=Protochlamydia amoebophila (strain UWE25) GN=rnc PE=3 SV=1 71 186 1.0E-06
sp|A3MZQ9|RNC_ACTP2 Ribonuclease 3 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rnc PE=3 SV=1 78 186 1.0E-06
sp|Q3J8D5|RNC_NITOC Ribonuclease 3 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rnc PE=3 SV=1 71 186 1.0E-06
sp|Q48EV3|RNC_PSE14 Ribonuclease 3 OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=rnc PE=3 SV=1 71 186 2.0E-06
sp|Q4ZPE1|RNC_PSEU2 Ribonuclease 3 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rnc PE=3 SV=1 71 186 2.0E-06
sp|Q87XG1|RNC_PSESM Ribonuclease 3 OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=rnc PE=3 SV=1 71 186 2.0E-06
sp|Q2NS13|RNC_SODGM Ribonuclease 3 OS=Sodalis glossinidius (strain morsitans) GN=rnc PE=3 SV=1 78 202 2.0E-06
sp|A8GI25|RNC_SERP5 Ribonuclease 3 OS=Serratia proteamaculans (strain 568) GN=rnc PE=3 SV=1 91 202 2.0E-06
sp|A4XSC4|RNC_PSEMY Ribonuclease 3 OS=Pseudomonas mendocina (strain ymp) GN=rnc PE=3 SV=1 71 186 3.0E-06
sp|F0KKL2|RNC_ACICP Ribonuclease 3 OS=Acinetobacter calcoaceticus (strain PHEA-2) GN=rnc PE=3 SV=2 73 134 3.0E-06
sp|A9VT87|RNC_BACWK Ribonuclease 3 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rnc PE=3 SV=1 71 210 3.0E-06
sp|Q8RGX3|RNC_FUSNN Ribonuclease 3 OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=rnc PE=3 SV=1 71 186 3.0E-06
sp|B0KV27|RNC_PSEPG Ribonuclease 3 OS=Pseudomonas putida (strain GB-1) GN=rnc PE=3 SV=1 77 200 4.0E-06
sp|Q3KHL9|RNC_PSEPF Ribonuclease 3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rnc PE=3 SV=1 71 186 4.0E-06
sp|Q88MY5|RNC_PSEPK Ribonuclease 3 OS=Pseudomonas putida (strain KT2440) GN=rnc PE=3 SV=1 77 200 4.0E-06
sp|A5W8F2|RNC_PSEP1 Ribonuclease 3 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rnc PE=3 SV=1 77 200 4.0E-06
sp|A1US36|RNC_BARBK Ribonuclease 3 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rnc PE=3 SV=1 71 204 5.0E-06
sp|Q819V8|RNC_BACCR Ribonuclease 3 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) GN=rnc PE=3 SV=1 71 210 5.0E-06
sp|B7HDX2|RNC_BACC4 Ribonuclease 3 OS=Bacillus cereus (strain B4264) GN=rnc PE=3 SV=1 71 210 5.0E-06
sp|B7IUK8|RNC_BACC2 Ribonuclease 3 OS=Bacillus cereus (strain G9842) GN=rnc PE=3 SV=1 71 210 5.0E-06
sp|B9IVD8|RNC_BACCQ Ribonuclease 3 OS=Bacillus cereus (strain Q1) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|B7HLI2|RNC_BACC7 Ribonuclease 3 OS=Bacillus cereus (strain AH187) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|Q732M1|RNC_BACC1 Ribonuclease 3 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|Q3SRB3|RNC_NITWN Ribonuclease 3 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rnc PE=3 SV=1 71 213 6.0E-06
sp|B0BUA6|RNC_ACTPJ Ribonuclease 3 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rnc PE=3 SV=1 78 203 6.0E-06
sp|Q6HEW6|RNC_BACHK Ribonuclease 3 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|C1EP73|RNC_BACC3 Ribonuclease 3 OS=Bacillus cereus (strain 03BB102) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|B7JJT6|RNC_BACC0 Ribonuclease 3 OS=Bacillus cereus (strain AH820) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|Q81WI8|RNC_BACAN Ribonuclease 3 OS=Bacillus anthracis GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|C3L778|RNC_BACAC Ribonuclease 3 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|C3P5Q0|RNC_BACAA Ribonuclease 3 OS=Bacillus anthracis (strain A0248) GN=rnc PE=3 SV=1 71 210 6.0E-06
sp|A5UFI8|RNC_HAEIG Ribonuclease 3 OS=Haemophilus influenzae (strain PittGG) GN=rnc PE=3 SV=1 71 301 6.0E-06
sp|A5UBC4|RNC_HAEIE Ribonuclease 3 OS=Haemophilus influenzae (strain PittEE) GN=rnc PE=3 SV=1 71 301 7.0E-06
sp|Q4QPN0|RNC_HAEI8 Ribonuclease 3 OS=Haemophilus influenzae (strain 86-028NP) GN=rnc PE=3 SV=1 71 301 7.0E-06
sp|C6DC00|RNC_PECCP Ribonuclease 3 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rnc PE=3 SV=1 73 202 8.0E-06
sp|P44441|RNC_HAEIN Ribonuclease 3 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rnc PE=3 SV=1 71 210 8.0E-06
sp|A0L633|RNC_MAGMM Ribonuclease 3 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rnc PE=3 SV=1 60 312 1.0E-05
[Show less]

GO

GO Term Description Terminal node
GO:0006396 RNA processing Yes
GO:0004525 ribonuclease III activity Yes
GO:0090304 nucleic acid metabolic process No
GO:0044237 cellular metabolic process No
GO:0044238 primary metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0003824 catalytic activity No
GO:0009987 cellular process No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0008152 metabolic process No
GO:0004521 endoribonuclease activity No
GO:0006725 cellular aromatic compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters No
GO:0006807 nitrogen compound metabolic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters No
GO:0004519 endonuclease activity No
GO:0003674 molecular_function No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0004518 nuclease activity No
GO:0016070 RNA metabolic process No
GO:0032296 double-stranded RNA-specific ribonuclease activity No
GO:0004540 ribonuclease activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|236
MTKRAASVSAAGNSQSDSLSEVNKKRRVMQSPYHDAANPPDGIPVPALFITTPWRSSEIPQELPPLPQVLDPELE
KLAFTHPGCGNGESYERLEWLGDAYLELIASSLIYQTFSRTQSGRCSQLRELLIRNTTLAGYFRQYGMSSRARLP
PEFAQCRALGRGRSSDKDLLKTQGDMFEAFIAALILSDAQNGLANTASWLKALWGRTIREQIQNNERLVERSLPS
GIKVAHCAPGSGNLNAKDKLRACIGAKGVSIRYEDIPGITKDKDLGLPLYTVGVYLDGWGEKNVLLGKGTALKKK
EAGHRAAAMALEDKAMMGVYEAKKKAFQEAASAAGQSKQSGQESD*
Coding >Ophun1|236
ATGACGAAGCGCGCGGCGTCGGTATCGGCGGCGGGCAACAGCCAGAGCGACAGTCTGTCAGAAGTCAACAAAAAG
AGGCGGGTCATGCAGAGCCCATATCACGATGCCGCGAACCCGCCAGATGGCATTCCCGTCCCAGCACTATTCATC
ACCACGCCTTGGCGGTCGTCCGAGATTCCTCAAGAGCTGCCACCTCTCCCCCAAGTGTTGGACCCGGAACTTGAA
AAACTAGCCTTTACACACCCTGGATGCGGAAACGGGGAGAGCTACGAACGGCTGGAATGGCTCGGCGATGCCTAT
CTCGAGCTCATTGCATCCAGCCTCATCTATCAGACCTTTTCACGGACGCAATCCGGTCGTTGTTCGCAACTTCGA
GAGCTGCTGATTCGCAACACGACGCTGGCGGGCTATTTCCGTCAATATGGCATGTCCTCGCGGGCCAGGCTCCCT
CCGGAATTTGCACAATGTCGAGCGCTAGGCAGGGGCAGATCGAGTGACAAGGATTTACTCAAGACGCAGGGCGAC
ATGTTTGAGGCCTTTATCGCCGCTCTCATTCTTTCGGATGCACAAAATGGACTGGCCAACACTGCATCTTGGCTC
AAAGCACTCTGGGGCCGAACGATCCGAGAGCAGATACAGAACAACGAGAGATTAGTAGAGAGGTCGCTGCCGTCC
GGTATCAAGGTCGCGCATTGCGCACCCGGAAGTGGCAATCTCAACGCCAAAGATAAGCTGAGAGCTTGCATCGGG
GCGAAGGGCGTCTCTATTCGCTACGAGGACATTCCCGGCATCACCAAAGACAAAGATTTGGGTCTGCCGCTATAC
ACAGTCGGGGTATACTTGGATGGCTGGGGTGAGAAGAACGTGCTCCTGGGCAAAGGCACAGCCCTGAAGAAGAAA
GAGGCTGGCCACCGGGCGGCGGCCATGGCGTTGGAGGATAAAGCCATGATGGGGGTTTACGAGGCCAAGAAGAAG
GCCTTTCAGGAAGCTGCCAGCGCTGCGGGACAATCGAAACAGTCGGGTCAGGAGTCAGATTAG
Transcript >Ophun1|236
ATGACGAAGCGCGCGGCGTCGGTATCGGCGGCGGGCAACAGCCAGAGCGACAGTCTGTCAGAAGTCAACAAAAAG
AGGCGGGTCATGCAGAGCCCATATCACGATGCCGCGAACCCGCCAGATGGCATTCCCGTCCCAGCACTATTCATC
ACCACGCCTTGGCGGTCGTCCGAGATTCCTCAAGAGCTGCCACCTCTCCCCCAAGTGTTGGACCCGGAACTTGAA
AAACTAGCCTTTACACACCCTGGATGCGGAAACGGGGAGAGCTACGAACGGCTGGAATGGCTCGGCGATGCCTAT
CTCGAGCTCATTGCATCCAGCCTCATCTATCAGACCTTTTCACGGACGCAATCCGGTCGTTGTTCGCAACTTCGA
GAGCTGCTGATTCGCAACACGACGCTGGCGGGCTATTTCCGTCAATATGGCATGTCCTCGCGGGCCAGGCTCCCT
CCGGAATTTGCACAATGTCGAGCGCTAGGCAGGGGCAGATCGAGTGACAAGGATTTACTCAAGACGCAGGGCGAC
ATGTTTGAGGCCTTTATCGCCGCTCTCATTCTTTCGGATGCACAAAATGGACTGGCCAACACTGCATCTTGGCTC
AAAGCACTCTGGGGCCGAACGATCCGAGAGCAGATACAGAACAACGAGAGATTAGTAGAGAGGTCGCTGCCGTCC
GGTATCAAGGTCGCGCATTGCGCACCCGGAAGTGGCAATCTCAACGCCAAAGATAAGCTGAGAGCTTGCATCGGG
GCGAAGGGCGTCTCTATTCGCTACGAGGACATTCCCGGCATCACCAAAGACAAAGATTTGGGTCTGCCGCTATAC
ACAGTCGGGGTATACTTGGATGGCTGGGGTGAGAAGAACGTGCTCCTGGGCAAAGGCACAGCCCTGAAGAAGAAA
GAGGCTGGCCACCGGGCGGCGGCCATGGCGTTGGAGGATAAAGCCATGATGGGGGTTTACGAGGCCAAGAAGAAG
GCCTTTCAGGAAGCTGCCAGCGCTGCGGGACAATCGAAACAGTCGGGTCAGGAGTCAGATTAG
Gene >Ophun1|236
ATGACGAAGCGCGCGGCGTCGGTATCGGCGGCGGGCAACAGCCAGAGCGACAGTCTGTCAGAAGTCAACAAAAAG
AGGCGGGTCATGCAGAGCCCATATCACGATGCCGCGAACCCGCCAGATGGCATTCCCGTCCCAGCACTATTCATC
ACCACGCCTTGGCGGTCGTCCGAGATTCCTCAAGAGCTGCCACCTCTCCCCCAAGTGTTGGACCCGGAACTTGAA
AAACTAGCCTTTACACACCCTGGATGCGGAAACGGGGAGAGCTACGAACGGCTGGAATGGCTCGGCGATGCCTAT
CTCGAGCTCATTGCATCCAGCCTCATCTATCAGACCTTTTCACGGACGCAATCCGGTCGTTGTTCGCAACTTCGA
GAGCTGCTGATTCGCAACACGACGCTGGCGGGCTATTTCCGTCAATATGGCATGTCCTCGCGGGCCAGGCTCCCT
CCGGAATTTGCACAATGTCGAGCGCTAGGCAGGGGCAGATCGAGTGACAAGGATTTACTCAAGACGCAGGGCGAC
ATGTTTGAGGCCTTTATCGCCGCTCTCATTCTTTCGGATGCACAAAATGGACTGGCCAACACTGCATCTTGGCTC
AAAGCACTCTGGGGCCGAACGATCCGAGAGCAGATACAGAACAACGAGAGATTAGTAGAGAGGTCGCTGCCGTCC
GGTATCAAGGTCGCGCATTGCGCACCCGGAAGTGGCAATCTCAACGCCAAAGATAAGCTGAGAGCTTGCATCGGG
GCGAAGGGCGTCTCTATTCGCTACGAGGACATTCCCGGCATCACCAAAGACAAAGATTTGGGTCTGCCGCTATAC
ACAGTCGGGGTATACTTGGATGGCTGGGGTGAGAAGAACGTGCTCCTGGGCAAAGGCACAGCCCTGAAGAAGAAA
GAGGCTGGCCACCGGGCGGCGGCCATGGCGTTGGAGGATAAAGCCATGATGGGGGTTTACGAGGCCAAGAAGAAG
GCCTTTCAGGAAGCTGCCAGCGCTGCGGGACAATCGAAACAGTCGGGTCAGGAGTCAGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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