© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|2355 |
| Gene name | |
| Location | Contig_215:469..1118 |
| Strand | - |
| Gene length (bp) | 649 |
| Transcript length (bp) | 369 |
| Coding sequence length (bp) | 369 |
| Protein length (aa) | 123 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01184 | Gpr1_Fun34_YaaH | GPR1/FUN34/yaaH family | 3.0E-10 | 69 | 118 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q24JP1|ALCS_ASPFU | Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 | 35 | 116 | 4.0E-17 |
| sp|B0YBR5|ALCS_ASPFC | Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 | 35 | 116 | 4.0E-17 |
| sp|Q460G9|ALCS_EMENI | Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 | 35 | 116 | 5.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 98 | 120 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|2355 MAEKIEPVARPATRLGSDAELGKMDALQNLRTAHSVSMSPELFEKLYLTPVNSKVGKLRMTFGNPAPLGAFWFQG GVLMLLASILEWVLGNTFPAVTFGVYGTFWWGFAAGQTPAFAVGSRE* |
| Coding | >Ophun1|2355 ATGGCCGAGAAGATCGAGCCCGTTGCCCGTCCGGCGACGAGGTTAGGTTCCGACGCCGAGCTGGGCAAGATGGAT GCGCTGCAGAATCTACGGACGGCGCATAGCGTGTCGATGAGTCCCGAGCTTTTCGAGAAGCTTTACCTCACGCCT GTGAACAGCAAGGTTGGGAAGCTACGCATGACGTTTGGGAATCCGGCGCCGCTCGGCGCCTTTTGGTTCCAGGGC GGCGTCCTGATGCTCCTGGCCAGCATCCTCGAATGGGTCCTCGGCAACACCTTCCCCGCCGTAACCTTTGGCGTC TACGGCACCTTTTGGTGGGGGTTCGCAGCTGGACAGACGCCTGCCTTTGCGGTTGGGTCTCGCGAGTAA |
| Transcript | >Ophun1|2355 ATGGCCGAGAAGATCGAGCCCGTTGCCCGTCCGGCGACGAGGTTAGGTTCCGACGCCGAGCTGGGCAAGATGGAT GCGCTGCAGAATCTACGGACGGCGCATAGCGTGTCGATGAGTCCCGAGCTTTTCGAGAAGCTTTACCTCACGCCT GTGAACAGCAAGGTTGGGAAGCTACGCATGACGTTTGGGAATCCGGCGCCGCTCGGCGCCTTTTGGTTCCAGGGC GGCGTCCTGATGCTCCTGGCCAGCATCCTCGAATGGGTCCTCGGCAACACCTTCCCCGCCGTAACCTTTGGCGTC TACGGCACCTTTTGGTGGGGGTTCGCAGCTGGACAGACGCCTGCCTTTGCGGTTGGGTCTCGCGAGTAA |
| Gene | >Ophun1|2355 ATGGCCGAGAAGATCGAGCCCGTTGCCCGTCCGGCGACGAGGTTAGGTTCCGACGCCGAGCTGGGCAAGATGGAT GCGCTGCAGAATCTACGGACGGCGCATAGCGTGTCGATGAGTCCCGAGCTTTTCGAGAAGCTTTACCTCACGCCT GTGAACAGCAAGGTTGGGAAGCTACGCATGACGTTTGGGAATCCGGCGCCGCTGTGAGTTTTGGGGGGGGGGGGG GGGGGGTGGGGGGATTCCGGCATGAGATGTAGGAAGGGGATTTGAGCTGATGGGTTCTAGGGGTCTTGCTGGATT TATTATTTGCTTGAGTCCGCTTTCTTTCGATCTTATGGGGTGGCGAGGCTCTGGTGGACAGGGAAACGCATCTCT GTGAGCCCCCCAATCTCCATCTTTCGTCTTCAAGGGCACAGCTAATGATCGGCAGCGGCGCCTTTTGGTTCCAGG GCGGCGTCCTGATGCTCCTGGCCAGCATCCTCGAATGGGTCCTCGGCAACACCTTCCCCGCCGTAACCTTTGGCG TCTACGGCACCTTTTGGTGGGGGTTCGCAGCTGGACAGACGCCTGCCTTTGCGGTTGGGTCTCGGTATGCGCCTG GGAAGCCGATATCCGAAGGGTTAGAGTCTCGGGGGTTCGAAGCGAGTAA |