© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|2347 |
| Gene name | |
| Location | Contig_214:13702..15218 |
| Strand | + |
| Gene length (bp) | 1516 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11735 | CAP59_mtransfer | Cryptococcal mannosyltransferase 1 | 1.2E-85 | 102 | 353 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6U1Z4|CMT1_CRYNJ | Alpha-1,3-mannosyltransferase CMT1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CMT1 PE=1 SV=1 | 122 | 372 | 1.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|2347 MLRPMQSNDTTIVVTERQRSQWERLLTAMVLLTEHKLQWPRMLLPGDARTMRLRRSLRWRTVKLLALLFGLFSVL EVLWIHGKLVGGDRRRSTTSPSRPHERVYIASMHFNNGGILRDHWNDAVIRLTEALGPTNVFVSIFESGSWDDSK ELLRDLERELERRGVPHRVEISDVTHQDEMAAEVKGDGWIDTPRNRRELRRIPYLARLRNKTIQDLLDLGEKGTK FDKVLFLNDVVFTTEDVLTLMDTNGGDYGAACSLDFSKPPLYYDTFALRDADGNGHVMQTWPYLGAKLSRNALVN HLDAVPVTSCWNGIVVMPAEPFVSSTKLRFRGIADSLAAYHLEGSECCLIHADNPLSKTLGVYLNPRVRVGYTTA AYEATHRGAAWVSAWNIFVGLWTNRIRRWTALTLDKVVVNRRVRRWQREQAGRHEPGRFCLINEMQVLADNGWAH V* |
| Coding | >Ophun1|2347 ATGCTTCGTCCGATGCAATCGAATGATACTACCATCGTCGTCACCGAGAGGCAGCGCAGCCAATGGGAGCGTCTC CTGACAGCCATGGTGCTTCTCACAGAGCACAAGCTCCAATGGCCCCGGATGCTGCTCCCGGGAGACGCACGCACA ATGCGCCTTCGCCGAAGCCTGCGATGGCGGACCGTCAAGCTGCTGGCCCTGCTGTTCGGCCTGTTCAGCGTCCTC GAGGTGCTATGGATTCACGGCAAGCTCGTGGGAGGCGATCGACGACGGAGTACGACGAGTCCTTCGCGGCCGCAC GAGCGCGTCTATATCGCGAGCATGCACTTCAATAACGGCGGCATCCTGAGGGATCACTGGAACGACGCTGTGATC CGCCTGACGGAGGCGTTGGGACCGACCAACGTCTTTGTGAGCATATTCGAGAGCGGCAGCTGGGATGATAGCAAG GAGCTGCTTCGCGACCTGGAGCGCGAGCTGGAGCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTTACC CATCAGGATGAGATGGCTGCCGAGGTCAAGGGCGACGGCTGGATCGACACGCCCCGGAATCGGAGGGAGCTGCGG CGGATCCCTTACCTCGCGCGGCTGCGCAACAAGACGATACAGGATCTGCTGGATCTCGGCGAGAAGGGCACCAAG TTCGACAAGGTGCTGTTTCTCAACGACGTCGTCTTTACGACTGAGGATGTATTGACGCTCATGGACACCAACGGC GGCGACTACGGTGCTGCTTGCTCGCTCGACTTCTCCAAGCCGCCGCTCTATTACGATACCTTTGCGTTGAGAGAC GCCGACGGCAACGGACATGTGATGCAGACGTGGCCATATCTCGGGGCCAAGCTTTCGAGGAACGCGCTGGTGAAC CATCTGGACGCCGTGCCCGTTACGAGCTGCTGGAACGGCATAGTGGTGATGCCGGCTGAACCGTTCGTGTCGTCG ACGAAGCTGCGCTTCCGTGGTATCGCCGATTCTCTGGCGGCATACCATCTCGAGGGCTCCGAGTGCTGCCTCATC CACGCCGACAACCCGCTGTCCAAGACGCTGGGCGTCTATCTCAATCCCCGGGTGCGCGTGGGCTATACCACGGCC GCGTACGAAGCGACGCACCGTGGCGCGGCGTGGGTGTCGGCGTGGAACATCTTTGTCGGCCTGTGGACGAACCGC ATCAGGCGCTGGACGGCCTTGACGTTGGACAAGGTCGTGGTCAATCGGCGTGTCAGGCGCTGGCAGAGGGAGCAG GCCGGGAGACACGAGCCGGGCAGGTTCTGTTTGATCAACGAGATGCAGGTGCTCGCTGACAACGGCTGGGCGCAC GTGTGA |
| Transcript | >Ophun1|2347 ATGCTTCGTCCGATGCAATCGAATGATACTACCATCGTCGTCACCGAGAGGCAGCGCAGCCAATGGGAGCGTCTC CTGACAGCCATGGTGCTTCTCACAGAGCACAAGCTCCAATGGCCCCGGATGCTGCTCCCGGGAGACGCACGCACA ATGCGCCTTCGCCGAAGCCTGCGATGGCGGACCGTCAAGCTGCTGGCCCTGCTGTTCGGCCTGTTCAGCGTCCTC GAGGTGCTATGGATTCACGGCAAGCTCGTGGGAGGCGATCGACGACGGAGTACGACGAGTCCTTCGCGGCCGCAC GAGCGCGTCTATATCGCGAGCATGCACTTCAATAACGGCGGCATCCTGAGGGATCACTGGAACGACGCTGTGATC CGCCTGACGGAGGCGTTGGGACCGACCAACGTCTTTGTGAGCATATTCGAGAGCGGCAGCTGGGATGATAGCAAG GAGCTGCTTCGCGACCTGGAGCGCGAGCTGGAGCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTTACC CATCAGGATGAGATGGCTGCCGAGGTCAAGGGCGACGGCTGGATCGACACGCCCCGGAATCGGAGGGAGCTGCGG CGGATCCCTTACCTCGCGCGGCTGCGCAACAAGACGATACAGGATCTGCTGGATCTCGGCGAGAAGGGCACCAAG TTCGACAAGGTGCTGTTTCTCAACGACGTCGTCTTTACGACTGAGGATGTATTGACGCTCATGGACACCAACGGC GGCGACTACGGTGCTGCTTGCTCGCTCGACTTCTCCAAGCCGCCGCTCTATTACGATACCTTTGCGTTGAGAGAC GCCGACGGCAACGGACATGTGATGCAGACGTGGCCATATCTCGGGGCCAAGCTTTCGAGGAACGCGCTGGTGAAC CATCTGGACGCCGTGCCCGTTACGAGCTGCTGGAACGGCATAGTGGTGATGCCGGCTGAACCGTTCGTGTCGTCG ACGAAGCTGCGCTTCCGTGGTATCGCCGATTCTCTGGCGGCATACCATCTCGAGGGCTCCGAGTGCTGCCTCATC CACGCCGACAACCCGCTGTCCAAGACGCTGGGCGTCTATCTCAATCCCCGGGTGCGCGTGGGCTATACCACGGCC GCGTACGAAGCGACGCACCGTGGCGCGGCGTGGGTGTCGGCGTGGAACATCTTTGTCGGCCTGTGGACGAACCGC ATCAGGCGCTGGACGGCCTTGACGTTGGACAAGGTCGTGGTCAATCGGCGTGTCAGGCGCTGGCAGAGGGAGCAG GCCGGGAGACACGAGCCGGGCAGGTTCTGTTTGATCAACGAGATGCAGGTGCTCGCTGACAACGGCTGGGCGCAC GTGTGA |
| Gene | >Ophun1|2347 ATGCTTCGTCCGATGCAATCGAATGATGTACGTGTAAGTGGCAGCGGTCATGTGACTGCTCTTCATCCAGACTAC CATCGTCGTCACCGAGAGGCAGCGCAGCCAATGGGAGCGTCTCCTGACAGCCATGGTGCTTCTCACAGAGCACAA GCTCCAATGGCCCCGGATGCTGCTCCCGGGAGACGCACGCACAATGCGCCTTCGCCGAAGCCTGCGATGGCGGAC CGTCAAGCTGCTGGCCCTGCTGTTCGGCCTGTTCAGCGTCCTCGAGGTGCTATGGATTCACGGCAAGCTCGTGGG AGGCGATCGACGACGGAGTACGACGAGTCCTTCGCGGCCGCACGAGCGCGTCTATATCGCGAGCATGCACTTCAA TAACGGCGGCATCCTGAGGGATCACTGGAACGACGCTGTGATCCGCCTGACGGAGGCGTTGGGACCGACCAACGT CTTTGTGAGCATATTCGAGAGCGGCAGCTGGGATGATAGCAAGGAGCTGCTTCGCGACCTGGAGCGCGAGCTGGA GCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTTACCCATCAGGATGAGATGGCTGCCGAGGTCAAGGG CGACGGCTGGATCGACACGCCCCGGAATCGGAGGGAGCTGCGGCGGATCCCTTACCTCGCGCGGCTGCGCAACAA GACGATACAGGATCTGCTGGATCTCGGCGAGAAGGGCACCAAGTTCGACAAGGTGCTGTTTCTCAACGACGTCGT CTTTACGGTGGGTGCTGGTGGAGGCGGAGTGATGGGATGAATTGCTAACGAGAGGGGACAAGACTGAGGATGTAT TGACGCTCATGGACACCAACGGCGGCGACTACGGTGCTGCTTGCTCGCTCGACTTCTCCAAGCCGCCGCTCTATT ACGATACCTTTGCGTTGAGAGACGCCGACGGCAACGGACATGTGATGCAGACGTGGCCATATCTCGGGGCCAAGC TTTCGAGGAACGCGCTGGTGAACCATCTGGACGCCGTGCCCGTTACGAGCTGCTGGAACGGCATAGGTACGGACA CGCTAGAGCCCCCTATACTGAGACTTGGCTGACGGTGTCTCGCCGACTGACAGTGGTGATGCCGGCTGAACCGTT CGTGTCGTCGACGAAGCTGCGCTTCCGTGGTATCGCCGATTCTCTGGCGGCATACCATCTCGAGGGCTCCGAGTG CTGCCTCATCCACGCCGACAACCCGCTGTCCAAGACGCTGGGCGTCTATCTCAATCCCCGGGTGCGCGTGGGCTA TACCACGGCCGCGTACGAAGCGACGCACCGTGGCGCGGCGTGGGTGTCGGCGTGGAACATCTTTGTCGGCCTGTG GACGAACCGCATCAGGCGCTGGACGGCCTTGACGTTGGACAAGGTCGTGGTCAATCGGCGTGTCAGGCGCTGGCA GAGGGAGCAGGCCGGGAGACACGAGCCGGGCAGGTTCTGTTTGATCAACGAGATGCAGGTGCTCGCTGACAACGG CTGGGCGCACGTGTGA |