Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|2312
Gene name
Location	Contig_212:9510..10519
Strand	+
Gene length (bp)	1009
Transcript length (bp)	930
Coding sequence length (bp)	930
Protein length (aa)	310

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 55	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22
2	103	125	22
3	146	168	22
4	206	228	22
5	249	271	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|2312 MGRHGCSFGPGPWDPDRRFETSCLIGPLPLSICRAAMFLYAFVTLVFVIGYSCSSPPSSLESSITNKSNTTTTNT NSTDPSQPQNLDFATAGCTSVARSFSYFTVLSYWGLAFYFLVAALHSLSYARSAPKSLLARLPRPLQALHSLFYS SVVVFPLIVSIVFWAVLYRNWFLSAYDAWRNISQHTLNSAFALFEIIVPRTEPLPWIHLLWLAAILLAYLAVAFI TLAHQGFYTYDFLDYRRAGSRGRVAGYVLGITAALVIFFCAVHFLILLRIWLTETKLGLDAKHAREPVLVADIES ADVEAKASK*
Coding	>Ophun1\|2312 ATGGGTCGCCATGGCTGCTCCTTCGGCCCCGGACCGTGGGACCCGGATCGTCGGTTCGAGACGTCGTGCCTGATC GGGCCGCTTCCACTCTCCATCTGTCGGGCCGCCATGTTCCTTTACGCCTTTGTCACCCTCGTCTTCGTCATCGGA TACTCTTGCTCCTCGCCTCCGTCCAGCCTCGAATCCAGCATCACCAACAAGTCCAACACCACCACCACCAATACC AATAGCACAGATCCCTCTCAACCACAGAACCTCGACTTCGCCACCGCCGGCTGCACCTCCGTCGCCCGCTCCTTT TCCTACTTCACCGTCCTCTCCTACTGGGGCCTCGCTTTTTACTTCCTCGTCGCCGCCCTCCACTCCCTATCCTAC GCCCGCTCAGCCCCAAAGTCGCTCCTCGCCCGCCTCCCGCGCCCGCTACAGGCCCTACACTCTCTCTTCTACTCG TCCGTCGTCGTCTTCCCCCTCATCGTCTCCATCGTCTTCTGGGCCGTCCTTTACCGCAACTGGTTCCTCTCCGCC TACGACGCCTGGCGCAACATCAGCCAACACACCCTCAACTCGGCCTTTGCCCTCTTCGAAATCATCGTGCCCCGT ACCGAACCCTTGCCCTGGATACATCTGCTCTGGCTCGCCGCCATCCTCCTCGCTTACCTCGCCGTCGCGTTCATC ACTCTGGCCCATCAGGGCTTCTACACCTACGACTTTCTCGACTACCGTCGCGCCGGCAGCCGCGGTCGTGTCGCA GGCTACGTGCTGGGCATCACCGCCGCCCTCGTCATCTTCTTCTGCGCCGTTCACTTCCTCATCCTCTTACGCATC TGGCTGACCGAGACCAAGCTCGGCCTCGACGCCAAGCACGCCCGCGAACCAGTCCTGGTCGCCGACATTGAGAGT GCCGACGTTGAGGCCAAGGCATCGAAATAA
Transcript	>Ophun1\|2312 ATGGGTCGCCATGGCTGCTCCTTCGGCCCCGGACCGTGGGACCCGGATCGTCGGTTCGAGACGTCGTGCCTGATC GGGCCGCTTCCACTCTCCATCTGTCGGGCCGCCATGTTCCTTTACGCCTTTGTCACCCTCGTCTTCGTCATCGGA TACTCTTGCTCCTCGCCTCCGTCCAGCCTCGAATCCAGCATCACCAACAAGTCCAACACCACCACCACCAATACC AATAGCACAGATCCCTCTCAACCACAGAACCTCGACTTCGCCACCGCCGGCTGCACCTCCGTCGCCCGCTCCTTT TCCTACTTCACCGTCCTCTCCTACTGGGGCCTCGCTTTTTACTTCCTCGTCGCCGCCCTCCACTCCCTATCCTAC GCCCGCTCAGCCCCAAAGTCGCTCCTCGCCCGCCTCCCGCGCCCGCTACAGGCCCTACACTCTCTCTTCTACTCG TCCGTCGTCGTCTTCCCCCTCATCGTCTCCATCGTCTTCTGGGCCGTCCTTTACCGCAACTGGTTCCTCTCCGCC TACGACGCCTGGCGCAACATCAGCCAACACACCCTCAACTCGGCCTTTGCCCTCTTCGAAATCATCGTGCCCCGT ACCGAACCCTTGCCCTGGATACATCTGCTCTGGCTCGCCGCCATCCTCCTCGCTTACCTCGCCGTCGCGTTCATC ACTCTGGCCCATCAGGGCTTCTACACCTACGACTTTCTCGACTACCGTCGCGCCGGCAGCCGCGGTCGTGTCGCA GGCTACGTGCTGGGCATCACCGCCGCCCTCGTCATCTTCTTCTGCGCCGTTCACTTCCTCATCCTCTTACGCATC TGGCTGACCGAGACCAAGCTCGGCCTCGACGCCAAGCACGCCCGCGAACCAGTCCTGGTCGCCGACATTGAGAGT GCCGACGTTGAGGCCAAGGCATCGAAATAA
Gene	>Ophun1\|2312 ATGGGTCGCCATGGCTGCTCCTTCGGCCCCGGACCGTGGGACCCGGATCGTCGGTTCGAGACGTCGTGCCTGATC GGGCCGCTTCCACTCTCCATCTGTCGGGCCGCCATGGTCCGTATAAGCTTCCATCTTTCGAGATGAAATCCACCT TGGTGTTACCAGCTGACATCTAATCTTCATCTCGACACAGTTCCTTTACGCCTTTGTCACCCTCGTCTTCGTCAT CGGATACTCTTGCTCCTCGCCTCCGTCCAGCCTCGAATCCAGCATCACCAACAAGTCCAACACCACCACCACCAA TACCAATAGCACAGATCCCTCTCAACCACAGAACCTCGACTTCGCCACCGCCGGCTGCACCTCCGTCGCCCGCTC CTTTTCCTACTTCACCGTCCTCTCCTACTGGGGCCTCGCTTTTTACTTCCTCGTCGCCGCCCTCCACTCCCTATC CTACGCCCGCTCAGCCCCAAAGTCGCTCCTCGCCCGCCTCCCGCGCCCGCTACAGGCCCTACACTCTCTCTTCTA CTCGTCCGTCGTCGTCTTCCCCCTCATCGTCTCCATCGTCTTCTGGGCCGTCCTTTACCGCAACTGGTTCCTCTC CGCCTACGACGCCTGGCGCAACATCAGCCAACACACCCTCAACTCGGCCTTTGCCCTCTTCGAAATCATCGTGCC CCGTACCGAACCCTTGCCCTGGATACATCTGCTCTGGCTCGCCGCCATCCTCCTCGCTTACCTCGCCGTCGCGTT CATCACTCTGGCCCATCAGGGCTTCTACACCTACGACTTTCTCGACTACCGTCGCGCCGGCAGCCGCGGTCGTGT CGCAGGCTACGTGCTGGGCATCACCGCCGCCCTCGTCATCTTCTTCTGCGCCGTTCACTTCCTCATCCTCTTACG CATCTGGCTGACCGAGACCAAGCTCGGCCTCGACGCCAAGCACGCCCGCGAACCAGTCCTGGTCGCCGACATTGA GAGTGCCGACGTTGAGGCCAAGGCATCGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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