© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|2306 |
| Gene name | |
| Location | Contig_2108:80..866 |
| Strand | - |
| Gene length (bp) | 786 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40015|ISC1_YEAST | Inositol phosphosphingolipids phospholipase C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ISC1 PE=1 SV=1 | 3 | 250 | 4.0E-19 |
| sp|O74369|CSS1_SCHPO | Inositol phosphosphingolipids phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=css1 PE=1 SV=2 | 1 | 250 | 5.0E-19 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 181 | 200 | 19 |
| 2 | 210 | 232 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 6414 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|2306 MDPLSLPHRIITSRAPVNDLWRLIHPHSALGPPQPDTPVPSARFNLTVNGATSDGPYNTWRWSKDAQKSLRAGRQ PPTVDPHAPDPKGKRLDYIFASLGPNSPWAVKSVAVTMTDPHPELSVSLSDHFAVSATLRRRSPTDDESDQAYND ETSLPLSAYDEILAHIDTYTARERAQRRYRALHFYAALVVWATILVAAWFAPQRFAPFLLALVASLVLAAGLIDG LLSLLFFSSELRSLQEFAWEVGNARCAAASRSKLNT* |
| Coding | >Ophun1|2306 ATGGACCCCCTCTCCCTCCCCCACCGCATCATCACCTCCCGCGCCCCCGTCAACGACCTCTGGCGCCTCATCCAC CCGCACAGCGCCCTCGGCCCCCCCCAACCCGACACCCCCGTCCCATCCGCCCGCTTCAACCTCACCGTCAACGGC GCCACCAGCGATGGCCCGTATAATACCTGGCGATGGTCCAAGGATGCTCAGAAGAGCCTCCGCGCAGGCCGCCAA CCCCCTACCGTCGATCCCCACGCTCCAGACCCCAAGGGCAAGCGACTGGACTACATCTTCGCCTCCCTCGGCCCC AACTCGCCATGGGCCGTCAAGTCCGTCGCCGTCACCATGACAGACCCCCATCCCGAACTATCCGTCTCCCTATCA GATCACTTCGCCGTCAGCGCCACCCTCCGCCGACGCTCCCCCACCGACGACGAATCCGACCAAGCCTACAACGAC GAAACCTCCCTCCCCCTATCCGCCTACGACGAGATCCTCGCCCACATCGACACCTACACCGCCCGCGAGCGCGCC CAACGCCGATACCGCGCCTTGCACTTTTACGCCGCCCTCGTCGTCTGGGCCACCATCCTCGTCGCTGCCTGGTTC GCCCCCCAACGCTTCGCCCCCTTCCTGCTCGCCCTCGTCGCAAGCCTCGTCCTGGCCGCCGGTCTGATCGACGGC CTGCTCTCCCTGCTCTTCTTCTCGTCCGAGCTGCGCAGCCTCCAAGAGTTCGCGTGGGAAGTTGGCAACGCCAGA TGCGCCGCCGCCAGTCGCTCCAAGCTCAACACGTAG |
| Transcript | >Ophun1|2306 ATGGACCCCCTCTCCCTCCCCCACCGCATCATCACCTCCCGCGCCCCCGTCAACGACCTCTGGCGCCTCATCCAC CCGCACAGCGCCCTCGGCCCCCCCCAACCCGACACCCCCGTCCCATCCGCCCGCTTCAACCTCACCGTCAACGGC GCCACCAGCGATGGCCCGTATAATACCTGGCGATGGTCCAAGGATGCTCAGAAGAGCCTCCGCGCAGGCCGCCAA CCCCCTACCGTCGATCCCCACGCTCCAGACCCCAAGGGCAAGCGACTGGACTACATCTTCGCCTCCCTCGGCCCC AACTCGCCATGGGCCGTCAAGTCCGTCGCCGTCACCATGACAGACCCCCATCCCGAACTATCCGTCTCCCTATCA GATCACTTCGCCGTCAGCGCCACCCTCCGCCGACGCTCCCCCACCGACGACGAATCCGACCAAGCCTACAACGAC GAAACCTCCCTCCCCCTATCCGCCTACGACGAGATCCTCGCCCACATCGACACCTACACCGCCCGCGAGCGCGCC CAACGCCGATACCGCGCCTTGCACTTTTACGCCGCCCTCGTCGTCTGGGCCACCATCCTCGTCGCTGCCTGGTTC GCCCCCCAACGCTTCGCCCCCTTCCTGCTCGCCCTCGTCGCAAGCCTCGTCCTGGCCGCCGGTCTGATCGACGGC CTGCTCTCCCTGCTCTTCTTCTCGTCCGAGCTGCGCAGCCTCCAAGAGTTCGCGTGGGAAGTTGGCAACGCCAGA TGCGCCGCCGCCAGTCGCTCCAAGCTCAACACGTAG |
| Gene | >Ophun1|2306 ATGGACCCCCTCTCCCTCCCCCACCGCATCATCACCTCCCGCGCCCCCGTCAACGACCTCTGGCGCCTCATCCAC CCGCACAGCGCCCTCGGCCCCCCCCAACCCGACACCCCCGTCCCATCCGCCCGCTTCAACCTCACCGTCAACGGC GCCACCAGCGATGGCCCGTATAATACCTGGCGATGGTCCAAGGATGCTCAGAAGAGCCTCCGCGCAGGCCGCCAA CCCCCTACCGTCGATCCCCACGCTCCAGACCCCAAGGGCAAGCGACTGGACTACATCTTCGCCTCCCTCGGCCCC AACTCGCCATGGGCCGTCAAGTCCGTCGCCGTCACCATGACAGACCCCCATCCCGAACTATCCGTCTCCCTATCA GATCACTTCGCCGTCAGCGCCACCCTCCGCCGACGCTCCCCCACCGACGACGAATCCGACCAAGCCTACAACGAC GAAACCTCCCTCCCCCTATCCGCCTACGACGAGATCCTCGCCCACATCGACACCTACACCGCCCGCGAGCGCGCC CAACGCCGATACCGCGCCTTGCACTTTTACGCCGCCCTCGTCGTCTGGGCCACCATCCTCGTCGCTGCCTGGTTC GCCCCCCAACGCTTCGCCCCCTTCCTGCTCGCCCTCGTCGCAAGCCTCGTCCTGGCCGCCGGTCTGATCGACGGC CTGCTCTCCCTGCTCTTCTTCTCGTCCGAGCTGCGCAGCCTCCAAGAGTTCGCGTGGGAAGTTGGCAACGCCAGA TGCGCCGCCGCCAGTCGCTCCAAGCTCAACACGTAG |