© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|225 |
| Gene name | |
| Location | Contig_1048:2072..3595 |
| Strand | + |
| Gene length (bp) | 1523 |
| Transcript length (bp) | 1401 |
| Coding sequence length (bp) | 1401 |
| Protein length (aa) | 467 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08645 | PNK3P | Polynucleotide kinase 3 phosphatase | 8.7E-53 | 94 | 270 |
| PF13671 | AAA_33 | AAA domain | 7.9E-27 | 309 | 435 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13911|PNK1_SCHPO | Bifunctional polynucleotide phosphatase/kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pnk1 PE=1 SV=2 | 98 | 465 | 2.0E-75 |
| sp|Q96T60|PNKP_HUMAN | Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1 | 94 | 451 | 9.0E-63 |
| sp|Q9JLV6|PNKP_MOUSE | Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus GN=Pnkp PE=1 SV=2 | 94 | 452 | 2.0E-59 |
| sp|Q19683|YZR5_CAEEL | Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans GN=F21D5.5 PE=2 SV=2 | 94 | 459 | 2.0E-55 |
| sp|Q5UQD2|PNKP_MIMIV | Putative bifunctional polynucleotide phosphatase/kinase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3 SV=1 | 93 | 463 | 2.0E-45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13911|PNK1_SCHPO | Bifunctional polynucleotide phosphatase/kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pnk1 PE=1 SV=2 | 98 | 465 | 2.0E-75 |
| sp|Q96T60|PNKP_HUMAN | Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1 | 94 | 451 | 9.0E-63 |
| sp|Q9JLV6|PNKP_MOUSE | Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus GN=Pnkp PE=1 SV=2 | 94 | 452 | 2.0E-59 |
| sp|Q19683|YZR5_CAEEL | Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans GN=F21D5.5 PE=2 SV=2 | 94 | 459 | 2.0E-55 |
| sp|Q5UQD2|PNKP_MIMIV | Putative bifunctional polynucleotide phosphatase/kinase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3 SV=1 | 93 | 463 | 2.0E-45 |
| sp|P21286|Y033_NPVAC | Uncharacterized 20.8 kDa protein in FGF-VUBI intergenic region OS=Autographa californica nuclear polyhedrosis virus PE=3 SV=2 | 91 | 270 | 2.0E-21 |
| sp|Q84JE8|ZDP_ARATH | Polynucleotide 3'-phosphatase ZDP OS=Arabidopsis thaliana GN=ZDP PE=1 SV=1 | 94 | 271 | 2.0E-15 |
| sp|Q9M041|BH140_ARATH | Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140 PE=3 SV=1 | 306 | 444 | 3.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|225 MILLVRLARRVSMAPSSPKGKRRAGDAPRSPQASKRTVQSSTTQSAVASFFTPVSQKPKDRVVWSQRALDAGATP TLLVGRYDTDDAELMRRCKMAVFDLDSTLIVPSSGKKHASGASDWKWWHPSVPTKLRQLHHEQGYRIVILSNQAG LSLQPPASSSKAPKAGILRRTADFKHKCASVLANLDLPTTVYAATERDAFRKPRTAMWTQACRDYDVAESDVDMQ GSFFVGDAGGRIASPDRGFAKDFSCSDRNFAHNVGIDFKTPEEFFLGLPPRDFRRELDLVRYPFAESDGEQQPPV FRRTNKRDVVLFCGPPGAGKSTFYRNYLEPLGYERVNQDTLKSRDKCVRTARDLLREGSSVAVDNTNADPETRAI WVQLAKTAGVPIRCVWFKTPLAVCEHNDAVRALNPSLNPEARTGLPKLAFTGFSSRFKEPKVSEGFEDVGEVEFE FRGSRSEYEVWGRYWT* |
| Coding | >Ophun1|225 ATGATCCTGCTCGTCCGTCTGGCGCGTCGCGTCAGCATGGCGCCCTCCAGTCCGAAAGGCAAGCGCAGGGCAGGC GACGCGCCAAGATCGCCACAGGCGTCGAAGCGAACGGTACAGAGTAGCACGACACAGAGCGCCGTCGCCAGCTTC TTTACGCCTGTTTCGCAGAAGCCAAAGGATCGCGTTGTCTGGTCGCAGCGTGCTCTTGATGCTGGCGCGACGCCT ACGTTGCTTGTCGGTCGTTATGATACGGACGATGCGGAGCTGATGAGGCGGTGCAAGATGGCCGTCTTTGATCTG GATTCGACGCTCATCGTTCCATCTTCCGGCAAGAAACACGCGAGCGGCGCGTCAGACTGGAAATGGTGGCACCCA TCGGTGCCTACGAAGCTGCGCCAGCTACACCACGAACAAGGCTATCGCATCGTCATCCTCTCCAACCAGGCCGGC CTATCGCTACAGCCGCCGGCCTCAAGTTCTAAAGCTCCCAAGGCGGGGATACTGAGGCGAACAGCCGACTTCAAG CACAAGTGCGCCTCGGTGCTCGCAAACCTCGATCTACCCACGACGGTGTATGCCGCGACGGAGAGGGACGCTTTC CGCAAGCCGCGCACGGCCATGTGGACGCAGGCGTGTCGCGACTACGACGTGGCTGAGAGCGACGTCGATATGCAG GGCAGTTTCTTTGTCGGCGATGCAGGCGGTCGGATAGCGAGCCCGGACCGCGGCTTTGCAAAGGACTTTAGCTGC TCGGATAGGAACTTTGCTCACAACGTCGGCATTGATTTCAAGACGCCCGAAGAGTTCTTTCTGGGCCTGCCGCCT AGGGACTTTCGCCGCGAGCTGGACCTGGTTCGCTATCCGTTTGCCGAAAGCGATGGCGAGCAGCAGCCGCCGGTC TTTCGGAGGACGAACAAGAGGGACGTGGTCTTGTTCTGCGGTCCTCCGGGGGCCGGGAAGAGCACCTTTTACCGG AACTATCTCGAGCCGCTGGGCTACGAGCGCGTCAACCAGGACACGCTCAAGAGCCGGGACAAGTGTGTCCGCACG GCGAGGGATCTGCTCCGCGAAGGCTCCTCGGTAGCCGTCGACAACACCAATGCCGATCCAGAGACGCGAGCCATC TGGGTGCAATTGGCCAAAACGGCCGGCGTCCCGATTCGCTGCGTTTGGTTCAAGACGCCGCTGGCCGTATGTGAG CACAACGACGCGGTGCGGGCCCTGAACCCATCTCTCAACCCGGAGGCGAGAACGGGCCTCCCGAAGCTGGCCTTT ACCGGCTTCTCTTCGCGCTTCAAGGAGCCCAAGGTGTCGGAGGGCTTCGAGGACGTTGGCGAGGTCGAGTTCGAG TTCCGTGGGTCGCGGTCGGAGTATGAGGTGTGGGGGCGATATTGGACGTGA |
| Transcript | >Ophun1|225 ATGATCCTGCTCGTCCGTCTGGCGCGTCGCGTCAGCATGGCGCCCTCCAGTCCGAAAGGCAAGCGCAGGGCAGGC GACGCGCCAAGATCGCCACAGGCGTCGAAGCGAACGGTACAGAGTAGCACGACACAGAGCGCCGTCGCCAGCTTC TTTACGCCTGTTTCGCAGAAGCCAAAGGATCGCGTTGTCTGGTCGCAGCGTGCTCTTGATGCTGGCGCGACGCCT ACGTTGCTTGTCGGTCGTTATGATACGGACGATGCGGAGCTGATGAGGCGGTGCAAGATGGCCGTCTTTGATCTG GATTCGACGCTCATCGTTCCATCTTCCGGCAAGAAACACGCGAGCGGCGCGTCAGACTGGAAATGGTGGCACCCA TCGGTGCCTACGAAGCTGCGCCAGCTACACCACGAACAAGGCTATCGCATCGTCATCCTCTCCAACCAGGCCGGC CTATCGCTACAGCCGCCGGCCTCAAGTTCTAAAGCTCCCAAGGCGGGGATACTGAGGCGAACAGCCGACTTCAAG CACAAGTGCGCCTCGGTGCTCGCAAACCTCGATCTACCCACGACGGTGTATGCCGCGACGGAGAGGGACGCTTTC CGCAAGCCGCGCACGGCCATGTGGACGCAGGCGTGTCGCGACTACGACGTGGCTGAGAGCGACGTCGATATGCAG GGCAGTTTCTTTGTCGGCGATGCAGGCGGTCGGATAGCGAGCCCGGACCGCGGCTTTGCAAAGGACTTTAGCTGC TCGGATAGGAACTTTGCTCACAACGTCGGCATTGATTTCAAGACGCCCGAAGAGTTCTTTCTGGGCCTGCCGCCT AGGGACTTTCGCCGCGAGCTGGACCTGGTTCGCTATCCGTTTGCCGAAAGCGATGGCGAGCAGCAGCCGCCGGTC TTTCGGAGGACGAACAAGAGGGACGTGGTCTTGTTCTGCGGTCCTCCGGGGGCCGGGAAGAGCACCTTTTACCGG AACTATCTCGAGCCGCTGGGCTACGAGCGCGTCAACCAGGACACGCTCAAGAGCCGGGACAAGTGTGTCCGCACG GCGAGGGATCTGCTCCGCGAAGGCTCCTCGGTAGCCGTCGACAACACCAATGCCGATCCAGAGACGCGAGCCATC TGGGTGCAATTGGCCAAAACGGCCGGCGTCCCGATTCGCTGCGTTTGGTTCAAGACGCCGCTGGCCGTATGTGAG CACAACGACGCGGTGCGGGCCCTGAACCCATCTCTCAACCCGGAGGCGAGAACGGGCCTCCCGAAGCTGGCCTTT ACCGGCTTCTCTTCGCGCTTCAAGGAGCCCAAGGTGTCGGAGGGCTTCGAGGACGTTGGCGAGGTCGAGTTCGAG TTCCGTGGGTCGCGGTCGGAGTATGAGGTGTGGGGGCGATATTGGACGTGA |
| Gene | >Ophun1|225 ATGATCCTGCTCGTCCGTCTGGCGCGTCGCGTCAGCATGGCGCCCTCCAGTCCGAAAGGCAAGCGCAGGGCAGGC GACGCGCCAAGATCGCCACAGGCGTCGAAGCGAACGGTACAGAGTAGCACGACACGTACGAGATGGCTTGCCGCC GACGAAAGCAGCCGCTGGCTGACTGTTTTCGGCCTCCAGAGAGCGCCGTCGCCAGCTTCTTTACGCCTGTTTCGC AGAAGCCAAAGGATCGCGTTGTCTGGTCGCAGCGTGCTCTTGATGCTGGCGCGACGCCTACGTTGCTTGTCGGTC GTTATGATACGGACGATGCGGAGCTGATGAGGCGGTGCAAGATGGCCGTCTTTGATCTGGATTCGACGCTCATCG TTCCATCTTCCGGCAAGAAACACGCGAGCGGCGCGTCAGACTGGAAATGGTGGCACCCATCGGTGCCTACGAAGC TGCGCCAGCTACACCACGAACAAGGCTATCGCATCGTCATCCTCTCCAACCAGGCCGGCCTATCGCTACAGCCGC CGGCCTCAAGTTCTAAAGCTCCCAAGGCGGGGATACTGAGGCGAACAGCCGACTTCAAGCACAAGTGCGCCTCGG TGCTCGCAAACCTCGATCTACCCACGACGGTGTATGCCGCGACGGAGAGGGACGCTTTCCGCAAGCCGCGCACGG CCATGTGGACGCAGGCGTGTCGCGACTACGACGTGGCTGAGAGCGACGTCGATATGCAGGGCAGTTTCTTTGTCG GCGATGCAGGCGGTCGGATAGCGAGCCCGGACCGCGGCTTTGCAAAGGACTTTAGCTGCTCGGATAGGAACTTTG CTCACAACGTCGGCATTGATTTCAAGACGCCCGAAGAGTTCTTTCTGGGCCTGCCGCCTAGGGACTTTCGCCGCG AGCTGGACCTGGTTCGCTATCCGTTTGCCGAAAGCGATGGCGAGCAGCAGCCGCCGGTCTTTCGGAGGACGAACA AGAGGGACGTGGTCTTGTTCTGCGGTCCTCCGGGGGCCGGGAAGAGCACCTTTTACCGGAACTATCTCGAGCCGC TGGGCTACGAGCGCGTCAACCAGGACACGCTCAAGAGCCGGGACAAGTGTGTCCGCACGGCGAGGGATCTGCTCC GCGAAGGCTCCTCGGTAGCCGTCGGTTAGTCTGTGAATGTACGTCTACAGGAGAACTCGGAGGAAGCTGACGCGA AGGGAGCTACAGACAACACCAATGCCGATCCAGAGACGCGAGCCATCTGGGTGCAATTGGCCAAAACGGCCGGCG TCCCGATTCGCTGCGTTTGGTTCAAGACGCCGCTGGCCGTATGTGAGCACAACGACGCGGTGCGGGCCCTGAACC CATCTCTCAACCCGGAGGCGAGAACGGGCCTCCCGAAGCTGGCCTTTACCGGCTTCTCTTCGCGCTTCAAGGAGC CCAAGGTGTCGGAGGGCTTCGAGGACGTTGGCGAGGTCGAGTTCGAGTTCCGTGGGTCGCGGTCGGAGTATGAGG TGTGGGGGCGATATTGGACGTGA |