Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|2152
Gene name
LocationContig_200:14460..14991
Strand+
Gene length (bp)531
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18142 SLATT_fungal SMODS and SLOG-associating 2TM effector domain 2.6E-26 2 104

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 31 53 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|2152
MSIVRWCLMVGQLLIGAAVTSLGSFAKRSGVPITILGAMNTVMAGLLALLHNSGLPDRYRYDMAQFEELEDRIKE
ILESGIAPIDQTTDQVLAECFDLFRMAKATVNANMPANYNSRQTLQTGTGGTEPTAPQPSANPSTPRMSAAAPSA
PQWNATAPGKKGAADSPAVSGGEKRK*
Coding >Ophun1|2152
ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT
GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG
CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG
ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC
ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA
GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA
CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG
AAATGA
Transcript >Ophun1|2152
ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT
GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG
CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG
ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC
ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA
GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA
CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG
AAATGA
Gene >Ophun1|2152
ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT
GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG
CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG
ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC
ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA
GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA
CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG
AAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail