Protein ID | Ophun1|2152 |
Gene name | |
Location | Contig_200:14460..14991 |
Strand | + |
Gene length (bp) | 531 |
Transcript length (bp) | 531 |
Coding sequence length (bp) | 531 |
Protein length (aa) | 177 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF18142 | SLATT_fungal | SMODS and SLOG-associating 2TM effector domain | 2.6E-26 | 2 | 104 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 31 | 53 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 669 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|2152 MSIVRWCLMVGQLLIGAAVTSLGSFAKRSGVPITILGAMNTVMAGLLALLHNSGLPDRYRYDMAQFEELEDRIKE ILESGIAPIDQTTDQVLAECFDLFRMAKATVNANMPANYNSRQTLQTGTGGTEPTAPQPSANPSTPRMSAAAPSA PQWNATAPGKKGAADSPAVSGGEKRK* |
Coding | >Ophun1|2152 ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG AAATGA |
Transcript | >Ophun1|2152 ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG AAATGA |
Gene | >Ophun1|2152 ATGAGCATCGTCCGCTGGTGTCTGATGGTCGGTCAACTGCTTATCGGCGCGGCCGTCACCTCTCTGGGCTCGTTT GCGAAGAGAAGCGGAGTTCCCATCACGATCCTGGGCGCTATGAATACCGTCATGGCTGGTCTTCTCGCCCTGCTG CACAACAGCGGCCTCCCGGATCGATATCGCTATGACATGGCTCAATTTGAAGAGCTGGAGGACCGCATCAAAGAG ATACTCGAGTCGGGCATCGCTCCCATCGACCAGACAACAGACCAGGTCCTTGCCGAATGCTTCGATCTCTTCCGC ATGGCCAAAGCAACCGTCAACGCCAACATGCCGGCCAACTACAACTCTCGCCAGACGCTGCAGACCGGCACCGGA GGCACCGAACCGACGGCTCCCCAGCCGAGCGCAAACCCGTCGACGCCGAGGATGAGCGCAGCTGCCCCGTCGGCA CCCCAGTGGAACGCAACGGCGCCCGGGAAGAAGGGTGCTGCCGACTCTCCGGCCGTGAGCGGAGGCGAAAAGAGG AAATGA |