Protein ID | Ophun1|213 |
Gene name | |
Location | Contig_1040:2288..3299 |
Strand | - |
Gene length (bp) | 1011 |
Transcript length (bp) | 933 |
Coding sequence length (bp) | 933 |
Protein length (aa) | 311 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01778 | Ribosomal_L28e | Ribosomal L28e protein family | 1.1E-39 | 6 | 120 |
PF04874 | Mak16 | Mak16 protein C-terminal region | 8.5E-28 | 144 | 238 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTE6|MAK16_SCHPO | Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mak16 PE=3 SV=1 | 1 | 291 | 4.0E-87 |
sp|P10962|MAK16_YEAST | Protein MAK16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK16 PE=1 SV=2 | 3 | 246 | 5.0E-87 |
sp|Q6P7N1|MAK16_XENTR | Protein MAK16 homolog OS=Xenopus tropicalis GN=mak16 PE=2 SV=1 | 1 | 222 | 2.0E-65 |
sp|Q66L33|MK16A_XENLA | Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1 | 1 | 183 | 4.0E-65 |
sp|Q7ZYG5|MK16B_XENLA | Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1 | 1 | 183 | 1.0E-64 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTE6|MAK16_SCHPO | Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mak16 PE=3 SV=1 | 1 | 291 | 4.0E-87 |
sp|P10962|MAK16_YEAST | Protein MAK16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK16 PE=1 SV=2 | 3 | 246 | 5.0E-87 |
sp|Q6P7N1|MAK16_XENTR | Protein MAK16 homolog OS=Xenopus tropicalis GN=mak16 PE=2 SV=1 | 1 | 222 | 2.0E-65 |
sp|Q66L33|MK16A_XENLA | Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1 | 1 | 183 | 4.0E-65 |
sp|Q7ZYG5|MK16B_XENLA | Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1 | 1 | 183 | 1.0E-64 |
sp|Q6NYD4|MAK16_DANRE | Protein MAK16 homolog OS=Danio rerio GN=mak16 PE=2 SV=1 | 1 | 205 | 1.0E-63 |
sp|Q9BXY0|MAK16_HUMAN | Protein MAK16 homolog OS=Homo sapiens GN=MAK16 PE=1 SV=2 | 1 | 256 | 1.0E-62 |
sp|Q1RML7|MAK16_BOVIN | Protein MAK16 homolog OS=Bos taurus GN=MAK16 PE=2 SV=1 | 1 | 284 | 9.0E-62 |
sp|Q8BGS0|MAK16_MOUSE | Protein MAK16 homolog OS=Mus musculus GN=Mak16 PE=1 SV=1 | 1 | 183 | 2.0E-60 |
sp|Q55DJ3|MAK16_DICDI | Protein MAK16 homolog OS=Dictyostelium discoideum GN=mak16l PE=3 SV=1 | 1 | 206 | 2.0E-55 |
sp|P46435|MAK16_SCHMA | Protein MAK16 homolog OS=Schistosoma mansoni GN=MAK16 PE=1 SV=2 | 1 | 199 | 5.0E-46 |
Orthofinder run ID | 4 |
Orthogroup | 2235 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|213 MASDEIVWQIINQQFCSYKLKTEKKQNFCRNEYNVTGLCNRQSCPLANSRYATVRQHPTKETLYLYTKTIERAHL PSKTWERIKLSNNYSKALEQIDEALIYWPKFLVHKCKQRLTRLTQVQMRSRRLAAEEERLGERLVPKLAPKVRHR EAARERKAEAAAKLERTIERELAERLRQGAYGDQPLNVSEAIWKKVLNAMERGGEGVRDEDMDEGVESDDEDKEI EYVSDGSESEKELDALEEWLGSDEEEDEDEDEVDDEDEDEEEEEEGDKAELKKRKRAMAVKARSRKRVKDNDGRE KLAVANPLEW* |
Coding | >Ophun1|213 ATGGCGTCAGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGCTCTTACAAGCTCAAGACGGAGAAGAAG CAAAACTTTTGCCGCAACGAGTACAACGTCACGGGCCTCTGCAATCGACAGTCATGTCCGCTCGCCAACTCTCGC TACGCCACCGTGCGCCAGCATCCGACCAAGGAGACGCTCTACCTCTACACCAAGACCATCGAGCGCGCCCACCTG CCGTCCAAGACGTGGGAGCGCATCAAGCTGTCCAACAACTACTCCAAGGCTCTCGAGCAGATTGACGAGGCCCTC ATCTACTGGCCCAAGTTTCTGGTGCACAAGTGCAAGCAGCGGCTGACGCGCCTGACGCAGGTGCAGATGCGGTCG CGGAGATTGGCGGCCGAGGAGGAGAGGTTGGGCGAGAGGCTGGTGCCCAAGCTTGCGCCCAAGGTGCGGCATCGT GAGGCGGCGCGCGAGAGAAAGGCCGAGGCGGCTGCTAAGCTTGAGCGGACGATTGAGCGCGAGTTGGCCGAGAGG TTGCGACAGGGGGCGTATGGGGATCAGCCTTTGAATGTGAGCGAGGCTATCTGGAAAAAGGTGCTCAATGCCATG GAGAGGGGAGGCGAGGGTGTGAGGGATGAGGATATGGATGAGGGTGTTGAGAGCGATGACGAGGATAAGGAGATT GAGTACGTGTCGGACGGCAGCGAGAGCGAGAAGGAGCTGGATGCTTTGGAGGAGTGGCTCGGAAGCGACGAGGAG GAGGATGAGGATGAGGATGAAGTCGATGATGAAGACGAGGACGAGGAAGAAGAGGAAGAGGGAGACAAGGCGGAG CTCAAGAAGCGCAAGCGTGCCATGGCTGTCAAGGCGCGGAGCAGGAAGCGGGTCAAGGACAACGATGGACGGGAG AAGCTGGCGGTTGCGAATCCGCTGGAGTGGTAG |
Transcript | >Ophun1|213 ATGGCGTCAGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGCTCTTACAAGCTCAAGACGGAGAAGAAG CAAAACTTTTGCCGCAACGAGTACAACGTCACGGGCCTCTGCAATCGACAGTCATGTCCGCTCGCCAACTCTCGC TACGCCACCGTGCGCCAGCATCCGACCAAGGAGACGCTCTACCTCTACACCAAGACCATCGAGCGCGCCCACCTG CCGTCCAAGACGTGGGAGCGCATCAAGCTGTCCAACAACTACTCCAAGGCTCTCGAGCAGATTGACGAGGCCCTC ATCTACTGGCCCAAGTTTCTGGTGCACAAGTGCAAGCAGCGGCTGACGCGCCTGACGCAGGTGCAGATGCGGTCG CGGAGATTGGCGGCCGAGGAGGAGAGGTTGGGCGAGAGGCTGGTGCCCAAGCTTGCGCCCAAGGTGCGGCATCGT GAGGCGGCGCGCGAGAGAAAGGCCGAGGCGGCTGCTAAGCTTGAGCGGACGATTGAGCGCGAGTTGGCCGAGAGG TTGCGACAGGGGGCGTATGGGGATCAGCCTTTGAATGTGAGCGAGGCTATCTGGAAAAAGGTGCTCAATGCCATG GAGAGGGGAGGCGAGGGTGTGAGGGATGAGGATATGGATGAGGGTGTTGAGAGCGATGACGAGGATAAGGAGATT GAGTACGTGTCGGACGGCAGCGAGAGCGAGAAGGAGCTGGATGCTTTGGAGGAGTGGCTCGGAAGCGACGAGGAG GAGGATGAGGATGAGGATGAAGTCGATGATGAAGACGAGGACGAGGAAGAAGAGGAAGAGGGAGACAAGGCGGAG CTCAAGAAGCGCAAGCGTGCCATGGCTGTCAAGGCGCGGAGCAGGAAGCGGGTCAAGGACAACGATGGACGGGAG AAGCTGGCGGTTGCGAATCCGCTGGAGTGGTAG |
Gene | >Ophun1|213 ATGGCGTCAGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGCTCTTACAAGCTCAAGTCAGTGGCTCGC TCTCGTCTGCTCTCTTCACGCATCGGATTCGTCCTCGTTTCGGCCTCGTACTGACAGGACTTCAGGACGGAGAAG AAGCAAAACTTTTGCCGCAACGAGTACAACGTCACGGGCCTCTGCAATCGACAGTCATGTCCGCTCGCCAACTCT CGCTACGCCACCGTGCGCCAGCATCCGACCAAGGAGACGCTCTACCTCTACACCAAGACCATCGAGCGCGCCCAC CTGCCGTCCAAGACGTGGGAGCGCATCAAGCTGTCCAACAACTACTCCAAGGCTCTCGAGCAGATTGACGAGGCC CTCATCTACTGGCCCAAGTTTCTGGTGCACAAGTGCAAGCAGCGGCTGACGCGCCTGACGCAGGTGCAGATGCGG TCGCGGAGATTGGCGGCCGAGGAGGAGAGGTTGGGCGAGAGGCTGGTGCCCAAGCTTGCGCCCAAGGTGCGGCAT CGTGAGGCGGCGCGCGAGAGAAAGGCCGAGGCGGCTGCTAAGCTTGAGCGGACGATTGAGCGCGAGTTGGCCGAG AGGTTGCGACAGGGGGCGTATGGGGATCAGCCTTTGAATGTGAGCGAGGCTATCTGGAAAAAGGTGCTCAATGCC ATGGAGAGGGGAGGCGAGGGTGTGAGGGATGAGGATATGGATGAGGGTGTTGAGAGCGATGACGAGGATAAGGAG ATTGAGTACGTGTCGGACGGCAGCGAGAGCGAGAAGGAGCTGGATGCTTTGGAGGAGTGGCTCGGAAGCGACGAG GAGGAGGATGAGGATGAGGATGAAGTCGATGATGAAGACGAGGACGAGGAAGAAGAGGAAGAGGGAGACAAGGCG GAGCTCAAGAAGCGCAAGCGTGCCATGGCTGTCAAGGCGCGGAGCAGGAAGCGGGTCAAGGACAACGATGGACGG GAGAAGCTGGCGGTTGCGAATCCGCTGGAGTGGTAG |