Protein ID | Ophun1|2048 |
Gene name | |
Location | Contig_196:3029..4658 |
Strand | - |
Gene length (bp) | 1629 |
Transcript length (bp) | 1536 |
Coding sequence length (bp) | 1536 |
Protein length (aa) | 512 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11754 | Velvet | Velvet factor | 2.2E-17 | 31 | 98 |
PF11754 | Velvet | Velvet factor | 1.7E-32 | 105 | 222 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 45 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|2048 MATPASIPTNCSRDSVQRIQRITRENRSLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIIEGASVD EGKDITFDYNANFFLYASLEPARVMATARATTPTAANPPILTGVPASGMAYLDRPAEAGYFIFPDLSVRHEGYFR LSFSLFETTKEERDFDLHPSDGDLPPGVDWRMEIKTQPFSVFSAKKFPGLMESTQLSKTVADQGCRVRIRRDVRM RKRDGKSSGYDRREEGYDRRRNVTPAREGIRPRSLSSSSDHRAPYAAAGPIPAAAVPDAGPRRPSAVDAYAPPPP PPPPPPPVYDSVPGRGHLSFGDAPRHYPAAAHHQPPPASPGGPYPSTTQSPYGYHHGRPLVSSACPSPALSAKQE PYDRASAGYATPSPSEGHSRRDSHASLSATPLLAAPPQRAGKSRPSLASLKIASLVSPLPPLEAQTEPLPALSVV STGGKRKHEIVFQQSAQPLHNGRRQQDPHYGDRPGAMHDPGQGMYLRADGKQGVVTFSQWQ* |
Coding | >Ophun1|2048 ATGGCGACGCCGGCATCCATCCCTACCAACTGCTCCCGCGACTCGGTTCAGCGCATCCAACGCATCACCCGCGAG AACCGCAGTCTGTGGTACCAGTTGACCGTCCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGCTCTGGCATGAAG GCAAACAGCGATCGCCGCCCGGTGGATCCCCCGCCCGTCGTCGAGCTCCGCATCATCGAGGGAGCGTCGGTGGAC GAGGGAAAGGACATCACCTTTGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTCGAGCCGGCCCGCGTCATG GCCACGGCCCGAGCCACGACTCCCACCGCCGCTAACCCGCCCATCCTGACGGGCGTACCGGCTTCGGGCATGGCC TATCTCGACCGCCCAGCCGAGGCCGGCTACTTCATCTTTCCCGATCTGTCCGTCCGCCACGAGGGCTACTTTCGC CTCTCCTTTAGCCTCTTCGAGACCACCAAGGAGGAACGCGACTTTGACCTTCACCCCTCCGACGGCGACCTGCCC CCGGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAGCGTCTTTAGCGCCAAGAAGTTCCCCGGCCTC ATGGAGAGCACTCAGCTCAGCAAGACGGTGGCCGATCAGGGATGCCGCGTCCGCATTCGCCGCGATGTCCGCATG AGGAAGCGTGACGGCAAGTCGAGCGGCTACGACCGTCGTGAAGAGGGCTATGATCGCCGCCGCAACGTCACTCCG GCCCGTGAAGGCATTCGACCTCGATCCCTCAGCAGCTCCAGCGACCACCGAGCTCCCTACGCAGCCGCCGGTCCC ATCCCCGCCGCCGCCGTCCCCGATGCCGGTCCCCGTCGCCCCTCGGCCGTCGACGCATATGCGCCACCGCCTCCG CCGCCTCCGCCGCCTCCGCCGGTATATGATTCGGTCCCCGGCCGCGGCCACTTGTCGTTCGGCGACGCGCCCCGT CACTACCCAGCTGCCGCTCACCACCAGCCGCCGCCCGCCTCGCCCGGCGGCCCCTATCCGTCGACGACGCAGTCG CCCTACGGATATCATCACGGTCGGCCGCTGGTCTCTTCCGCCTGTCCCTCGCCCGCCCTGTCGGCCAAGCAGGAG CCGTACGACCGTGCCTCGGCCGGCTACGCTACGCCCTCTCCGTCCGAGGGCCACTCGCGCCGAGATTCGCACGCC TCCCTATCGGCCACGCCCCTACTGGCGGCCCCCCCGCAGAGGGCGGGCAAGTCGCGCCCGTCGCTGGCCTCGCTC AAGATTGCGTCCCTCGTCTCGCCTCTGCCGCCATTGGAAGCCCAGACGGAGCCGCTACCGGCGCTGTCGGTGGTG TCGACGGGCGGCAAGCGAAAGCACGAAATCGTCTTCCAGCAGAGCGCCCAGCCGCTGCACAATGGCCGTCGCCAG CAGGACCCCCATTACGGCGATCGGCCGGGCGCCATGCACGATCCGGGTCAGGGCATGTATCTGCGCGCCGACGGC AAGCAGGGCGTCGTCACGTTTAGCCAATGGCAATAG |
Transcript | >Ophun1|2048 ATGGCGACGCCGGCATCCATCCCTACCAACTGCTCCCGCGACTCGGTTCAGCGCATCCAACGCATCACCCGCGAG AACCGCAGTCTGTGGTACCAGTTGACCGTCCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGCTCTGGCATGAAG GCAAACAGCGATCGCCGCCCGGTGGATCCCCCGCCCGTCGTCGAGCTCCGCATCATCGAGGGAGCGTCGGTGGAC GAGGGAAAGGACATCACCTTTGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTCGAGCCGGCCCGCGTCATG GCCACGGCCCGAGCCACGACTCCCACCGCCGCTAACCCGCCCATCCTGACGGGCGTACCGGCTTCGGGCATGGCC TATCTCGACCGCCCAGCCGAGGCCGGCTACTTCATCTTTCCCGATCTGTCCGTCCGCCACGAGGGCTACTTTCGC CTCTCCTTTAGCCTCTTCGAGACCACCAAGGAGGAACGCGACTTTGACCTTCACCCCTCCGACGGCGACCTGCCC CCGGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAGCGTCTTTAGCGCCAAGAAGTTCCCCGGCCTC ATGGAGAGCACTCAGCTCAGCAAGACGGTGGCCGATCAGGGATGCCGCGTCCGCATTCGCCGCGATGTCCGCATG AGGAAGCGTGACGGCAAGTCGAGCGGCTACGACCGTCGTGAAGAGGGCTATGATCGCCGCCGCAACGTCACTCCG GCCCGTGAAGGCATTCGACCTCGATCCCTCAGCAGCTCCAGCGACCACCGAGCTCCCTACGCAGCCGCCGGTCCC ATCCCCGCCGCCGCCGTCCCCGATGCCGGTCCCCGTCGCCCCTCGGCCGTCGACGCATATGCGCCACCGCCTCCG CCGCCTCCGCCGCCTCCGCCGGTATATGATTCGGTCCCCGGCCGCGGCCACTTGTCGTTCGGCGACGCGCCCCGT CACTACCCAGCTGCCGCTCACCACCAGCCGCCGCCCGCCTCGCCCGGCGGCCCCTATCCGTCGACGACGCAGTCG CCCTACGGATATCATCACGGTCGGCCGCTGGTCTCTTCCGCCTGTCCCTCGCCCGCCCTGTCGGCCAAGCAGGAG CCGTACGACCGTGCCTCGGCCGGCTACGCTACGCCCTCTCCGTCCGAGGGCCACTCGCGCCGAGATTCGCACGCC TCCCTATCGGCCACGCCCCTACTGGCGGCCCCCCCGCAGAGGGCGGGCAAGTCGCGCCCGTCGCTGGCCTCGCTC AAGATTGCGTCCCTCGTCTCGCCTCTGCCGCCATTGGAAGCCCAGACGGAGCCGCTACCGGCGCTGTCGGTGGTG TCGACGGGCGGCAAGCGAAAGCACGAAATCGTCTTCCAGCAGAGCGCCCAGCCGCTGCACAATGGCCGTCGCCAG CAGGACCCCCATTACGGCGATCGGCCGGGCGCCATGCACGATCCGGGTCAGGGCATGTATCTGCGCGCCGACGGC AAGCAGGGCGTCGTCACGTTTAGCCAATGGCAATAG |
Gene | >Ophun1|2048 ATGGCGACGCCGGCATCCATCCCTACCAACTGCTCCCGCGACTCGGTTCAGCGCATCCAACGCATCACCCGCGAG AACCGCAGTCTGTGGTACCAGTTGACCGTCCTCCAGCAGCCCGAGCGTGCCCGAGCATGCGGCTCTGGCATGAAG GGTTTGTCTCTCTCTCCCTCTCTCCCCCTCTCTCCCCCTCCTCCCTCTCTCTCTTCTTGGCCCTCGAAATGGCTC GGCTACTGACTCGACGCAGCAAACAGCGATCGCCGCCCGGTGGATCCCCCGCCCGTCGTCGAGCTCCGCATCATC GAGGGAGCGTCGGTGGACGAGGGAAAGGACATCACCTTTGACTACAATGCCAACTTCTTCCTCTACGCCAGCCTC GAGCCGGCCCGCGTCATGGCCACGGCCCGAGCCACGACTCCCACCGCCGCTAACCCGCCCATCCTGACGGGCGTA CCGGCTTCGGGCATGGCCTATCTCGACCGCCCAGCCGAGGCCGGCTACTTCATCTTTCCCGATCTGTCCGTCCGC CACGAGGGCTACTTTCGCCTCTCCTTTAGCCTCTTCGAGACCACCAAGGAGGAACGCGACTTTGACCTTCACCCC TCCGACGGCGACCTGCCCCCGGGCGTCGACTGGCGCATGGAGATCAAGACGCAGCCCTTCAGCGTCTTTAGCGCC AAGAAGTTCCCCGGCCTCATGGAGAGCACTCAGCTCAGCAAGACGGTGGCCGATCAGGGATGCCGCGTCCGCATT CGCCGCGATGTCCGCATGAGGAAGCGTGACGGCAAGTCGAGCGGCTACGACCGTCGTGAAGAGGGCTATGATCGC CGCCGCAACGTCACTCCGGCCCGTGAAGGCATTCGACCTCGATCCCTCAGCAGCTCCAGCGACCACCGAGCTCCC TACGCAGCCGCCGGTCCCATCCCCGCCGCCGCCGTCCCCGATGCCGGTCCCCGTCGCCCCTCGGCCGTCGACGCA TATGCGCCACCGCCTCCGCCGCCTCCGCCGCCTCCGCCGGTATATGATTCGGTCCCCGGCCGCGGCCACTTGTCG TTCGGCGACGCGCCCCGTCACTACCCAGCTGCCGCTCACCACCAGCCGCCGCCCGCCTCGCCCGGCGGCCCCTAT CCGTCGACGACGCAGTCGCCCTACGGATATCATCACGGTCGGCCGCTGGTCTCTTCCGCCTGTCCCTCGCCCGCC CTGTCGGCCAAGCAGGAGCCGTACGACCGTGCCTCGGCCGGCTACGCTACGCCCTCTCCGTCCGAGGGCCACTCG CGCCGAGATTCGCACGCCTCCCTATCGGCCACGCCCCTACTGGCGGCCCCCCCGCAGAGGGCGGGCAAGTCGCGC CCGTCGCTGGCCTCGCTCAAGATTGCGTCCCTCGTCTCGCCTCTGCCGCCATTGGAAGCCCAGACGGAGCCGCTA CCGGCGCTGTCGGTGGTGTCGACGGGCGGCAAGCGAAAGCACGAAATCGTCTTCCAGCAGAGCGCCCAGCCGCTG CACAATGGCCGTCGCCAGCAGGACCCCCATTACGGCGATCGGCCGGGCGCCATGCACGATCCGGGTCAGGGCATG TATCTGCGCGCCGACGGCAAGCAGGGCGTCGTCACGTTTAGCCAATGGCAATAG |