Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|1979
Gene name
Location	Contig_19:65950..67151
Strand	+
Gene length (bp)	1201
Transcript length (bp)	1023
Coding sequence length (bp)	1023
Protein length (aa)	341

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13532	2OG-FeII_Oxy_2	2OG-Fe(II) oxygenase superfamily	4.1E-34	102	327

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5XIC8\|ALKB3_RAT	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1	217	327	1.0E-11
sp\|Q8K1E6\|ALKB3_MOUSE	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus GN=Alkbh3 PE=1 SV=1	217	327	7.0E-11
sp\|Q32L00\|ALKB3_BOVIN	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus GN=ALKBH3 PE=2 SV=1	219	327	8.0E-11
sp\|Q96Q83\|ALKB3_HUMAN	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1	217	327	1.0E-10
sp\|Q9SIE0\|ALKB2_ARATH	DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2	219	327	2.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|1979 MMEGGKRKADDEGETTEVKIAMLASMHPDVGPEKLLDMLVAHQGSIASTTAALRRPKPSAKQQSSLRRYAPITSS SGRKIKAVKGRTLHVFDPVDVAEHTPCTVVHDFLPAGVAEGLLRELLAEAETFERSSFKLFENVVESPHSAAFFV EGGEERVLREEYFYNGSRLTDVRTITPFLAKVKPRVQEAVNREIQHRIATHYPNGRKLRHQPPGPWTANSAFVNC YGGGNESVGWHSDQLTYLGPRAVIGSLSLGVTREFRVRRVAVGGDDVGDEASQGVISIHLPHNSLLVMHAEMQEE WKHCVAPAAAIDAHPVSGNRRINVTYRDYRAVGMLHVLLG*
Coding	>Ophun1\|1979 ATGATGGAGGGTGGGAAGAGAAAGGCCGATGATGAGGGAGAGACGACGGAGGTGAAGATTGCGATGCTTGCTTCG ATGCATCCGGATGTTGGGCCGGAGAAACTGCTGGATATGCTCGTGGCGCATCAGGGATCCATCGCCAGCACGACA GCAGCCCTTCGACGACCGAAGCCGAGCGCAAAGCAGCAATCCTCGCTCCGACGGTACGCGCCCATCACGTCCAGC AGCGGCAGGAAGATCAAGGCGGTCAAGGGGAGGACGCTTCACGTGTTTGACCCCGTGGACGTGGCAGAGCATACG CCTTGCACGGTGGTGCATGATTTCTTGCCGGCGGGAGTGGCGGAGGGGTTGCTGAGGGAGTTGCTGGCCGAGGCG GAGACGTTTGAGAGGTCGAGCTTCAAGTTGTTTGAGAATGTTGTCGAGAGTCCGCACTCGGCTGCTTTTTTTGTG GAGGGGGGGGAGGAGAGGGTTTTGAGGGAGGAGTATTTCTACAACGGATCGAGGTTGACGGACGTGCGAACGATA ACGCCTTTCCTGGCAAAGGTCAAGCCACGCGTTCAAGAAGCCGTCAACCGGGAAATCCAGCACCGCATCGCAACG CACTACCCCAACGGCCGCAAGCTCCGACACCAACCTCCCGGACCATGGACGGCCAACTCGGCCTTTGTCAACTGC TACGGCGGCGGGAACGAGAGCGTCGGCTGGCATAGCGACCAGCTCACCTACCTCGGACCGCGAGCCGTCATCGGA TCCCTCTCTTTAGGGGTGACGCGCGAGTTCCGGGTGCGGAGGGTGGCGGTGGGTGGTGATGATGTGGGGGACGAG GCTTCGCAGGGGGTGATTTCGATTCACCTTCCGCATAACTCGCTGCTGGTGATGCACGCGGAGATGCAGGAGGAG TGGAAGCATTGCGTTGCGCCGGCTGCGGCCATTGATGCGCATCCCGTGTCGGGGAATCGGCGGATCAACGTCACG TATCGGGATTATCGGGCGGTCGGGATGCTCCATGTTTTGCTGGGCTGA
Transcript	>Ophun1\|1979 ATGATGGAGGGTGGGAAGAGAAAGGCCGATGATGAGGGAGAGACGACGGAGGTGAAGATTGCGATGCTTGCTTCG ATGCATCCGGATGTTGGGCCGGAGAAACTGCTGGATATGCTCGTGGCGCATCAGGGATCCATCGCCAGCACGACA GCAGCCCTTCGACGACCGAAGCCGAGCGCAAAGCAGCAATCCTCGCTCCGACGGTACGCGCCCATCACGTCCAGC AGCGGCAGGAAGATCAAGGCGGTCAAGGGGAGGACGCTTCACGTGTTTGACCCCGTGGACGTGGCAGAGCATACG CCTTGCACGGTGGTGCATGATTTCTTGCCGGCGGGAGTGGCGGAGGGGTTGCTGAGGGAGTTGCTGGCCGAGGCG GAGACGTTTGAGAGGTCGAGCTTCAAGTTGTTTGAGAATGTTGTCGAGAGTCCGCACTCGGCTGCTTTTTTTGTG GAGGGGGGGGAGGAGAGGGTTTTGAGGGAGGAGTATTTCTACAACGGATCGAGGTTGACGGACGTGCGAACGATA ACGCCTTTCCTGGCAAAGGTCAAGCCACGCGTTCAAGAAGCCGTCAACCGGGAAATCCAGCACCGCATCGCAACG CACTACCCCAACGGCCGCAAGCTCCGACACCAACCTCCCGGACCATGGACGGCCAACTCGGCCTTTGTCAACTGC TACGGCGGCGGGAACGAGAGCGTCGGCTGGCATAGCGACCAGCTCACCTACCTCGGACCGCGAGCCGTCATCGGA TCCCTCTCTTTAGGGGTGACGCGCGAGTTCCGGGTGCGGAGGGTGGCGGTGGGTGGTGATGATGTGGGGGACGAG GCTTCGCAGGGGGTGATTTCGATTCACCTTCCGCATAACTCGCTGCTGGTGATGCACGCGGAGATGCAGGAGGAG TGGAAGCATTGCGTTGCGCCGGCTGCGGCCATTGATGCGCATCCCGTGTCGGGGAATCGGCGGATCAACGTCACG TATCGGGATTATCGGGCGGTCGGGATGCTCCATGTTTTGCTGGGCTGA
Gene	>Ophun1\|1979 ATGATGGAGGGTGGGAAGAGAAAGGCCGATGATGAGGGAGAGACGACGGAGGTGAAGATTGCGATGCTTGCTTCG ATGCATCCGGATGTTGGGCCGGAGAAACTGCTGGATATGCTCGTGGCGCATCAGGGATCCATCGCCAGCACGACA GCAGCCCTTCGACGACCGAAGCCGAGCGCAAAGCAGCAATCCTCGCTCCGACGGTACGCGCCCATCACGTCCAGC AGCGGCAGGAAGATCAAGGCGGTCAAGGGGAGGACGCTTCACGTGTTTGACCCCGTGGACGTGGCAGAGCATACG CCTTGCACGGTGGTGCATGATTTCTTGCCGGCGGGAGTGGCGGAGGGGTTGCTGAGGGAGTTGCTGGCCGAGGCG GAGACGTTTGAGAGGTCGAGCTTCAAGTTGTTTGAGAATGTTGTCGAGAGTCCGCACTCGGCTGCTTTTTTTGTG GAGGGGGGGGAGGAGAGGGTTTTGAGGGAGGAGTATTTCTACAACGGATCGAGGTTGACGGTATGTCTGTTTTCT ACGAGGTCGTGGGATGGAACTGACGAGCGAGATAGGACGTGCGAACGATAACGCCTTTCCTGGCAAAGGTCAAGC CACGCGTTCAAGAAGCCGTCAACCGGGAAATCCAGCACCGCATCGCAACGCACTACCCCAACGGCCGCAAGCTCC GACACCAACCTCCCGGACCATGGACGGCCAACTCGGCCTTTGTCAACTGCTACGGCGGCGGGAACGAGAGCGTCG GCTGGCATAGCGACCAGCTCACCTACCTCGGACCGCGAGCCGTCATCGGATCCCTCTCTTTAGGGGTGACGCGCG AGTTCCGGGTGCGGAGGGTGGCGGTGGGTGGTGATGATGTGGGGGACGAGGCTTCGCAGGGGGTGATTTCGATTC ACCTTCCGCATAACTCGCTGCTGGTGATGCACGCGGAGATGCAGGAGGAGTGGAAGCATTGCGTTGCGCCGGCTG CGGCCATTGATGCGCATCCCGTGTCGGGGAATCGGCGGATCAACGTCACGTATCGGGATTATCGGGCGGTGATGC ATCCGCGGAGGACGCCGCGTTGCGGGTGTGGGGTTCCGTGTGTGTTGAGGGTTGTGCAGAGGAAGAGGGAGACGG TTGGGAGGTATTTCTGGATGTGTCATGCTGGGAATGTGCCTGGGAGGTCGGGATGCTCCATGTTTTGCTGGGCTG A

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