Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1962
Gene name
LocationContig_19:12238..13252
Strand+
Gene length (bp)1014
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12351 Fig1 Ca2+ regulator and membrane fusion protein Fig1 1.1E-51 75 256

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 140 162 22
3 182 204 22
4 235 257 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1962
MPKFEVGWYRFIPFLGYHHVLMILIAVAIILLSLLLAGCSSSSPLIPDIFLLSLYYQHYEAVPDTAQVDYNVHTA
IENIAGSASLQARVGYFGICVNPDGGSWLCSNNATALAKEVSVDQDPLNLIWLAAQFKDMIVFPYLIIIAIIFAF
ICVILLATFPGWHEEEDSQGSDRIIRNFPSRFTSQIALAIVFVASIFVLVSVLWQHTASVAASIIAQDFANGSVR
SGVGTSAMVMGWFAFTLLIIVTIGLVIMILSIRVINEYFPDN*
Coding >Ophun1|1962
ATGCCCAAGTTCGAGGTTGGCTGGTATCGGTTTATACCGTTCCTTGGCTACCATCATGTCTTGATGATCCTCATC
GCCGTCGCCATAATCCTCCTCTCCCTCCTCCTGGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTTC
CTCCTCTCCCTCTACTACCAGCACTACGAAGCCGTCCCCGACACCGCCCAGGTCGACTACAACGTCCACACCGCC
ATCGAGAACATCGCCGGCAGCGCCAGCCTACAGGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCAGATGGC
GGCTCCTGGCTCTGCAGCAATAATGCCACGGCCCTCGCAAAAGAGGTATCCGTCGATCAGGATCCGCTGAATCTC
ATCTGGCTGGCTGCTCAGTTCAAGGACATGATTGTCTTTCCCTACCTCATCATCATCGCCATCATCTTCGCCTTC
ATCTGCGTCATCCTCCTCGCCACCTTCCCCGGCTGGCACGAAGAAGAAGATTCCCAAGGCTCAGACCGCATCATC
AGGAACTTCCCCTCACGCTTCACCTCCCAGATCGCCCTGGCCATCGTCTTCGTCGCCTCCATCTTCGTCCTCGTC
TCCGTCCTCTGGCAGCACACCGCCTCCGTCGCCGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGC
AGCGGCGTCGGCACCAGCGCCATGGTCATGGGCTGGTTCGCCTTTACCCTGCTCATCATCGTCACAATCGGCCTC
GTCATCATGATCCTCAGCATCAGGGTTATAAACGAGTACTTTCCCGATAACTAG
Transcript >Ophun1|1962
ATGCCCAAGTTCGAGGTTGGCTGGTATCGGTTTATACCGTTCCTTGGCTACCATCATGTCTTGATGATCCTCATC
GCCGTCGCCATAATCCTCCTCTCCCTCCTCCTGGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTTC
CTCCTCTCCCTCTACTACCAGCACTACGAAGCCGTCCCCGACACCGCCCAGGTCGACTACAACGTCCACACCGCC
ATCGAGAACATCGCCGGCAGCGCCAGCCTACAGGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCAGATGGC
GGCTCCTGGCTCTGCAGCAATAATGCCACGGCCCTCGCAAAAGAGGTATCCGTCGATCAGGATCCGCTGAATCTC
ATCTGGCTGGCTGCTCAGTTCAAGGACATGATTGTCTTTCCCTACCTCATCATCATCGCCATCATCTTCGCCTTC
ATCTGCGTCATCCTCCTCGCCACCTTCCCCGGCTGGCACGAAGAAGAAGATTCCCAAGGCTCAGACCGCATCATC
AGGAACTTCCCCTCACGCTTCACCTCCCAGATCGCCCTGGCCATCGTCTTCGTCGCCTCCATCTTCGTCCTCGTC
TCCGTCCTCTGGCAGCACACCGCCTCCGTCGCCGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGC
AGCGGCGTCGGCACCAGCGCCATGGTCATGGGCTGGTTCGCCTTTACCCTGCTCATCATCGTCACAATCGGCCTC
GTCATCATGATCCTCAGCATCAGGGTTATAAACGAGTACTTTCCCGATAACTAG
Gene >Ophun1|1962
ATGCCCAAGTTCGAGGTTGGCTGGTATCGTACGTTCTGACTCTTTCCTCTTGATGGTTTGAAGAGAGAGAGAGAG
AGAGGGAGACTGGAATGTGCAACGACGAGACTAACTGTGGAACTTGCAGGGTTTATACCGTTCCTTGGCTACCAT
CATGTCTTGATGATCCTCATCGCCGTCGCCATAATCCTCCTCTGTATGATATCCCCCACCTCTCCCCCAACATCA
CAACCATCACTAACAACCCCCAGCCCTCCTCCTGGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTT
CCTCCTCTCCCTCTACTACCAGCACTACGAAGCCGTCCCCGACACCGCCCAGGTCGACTACAACGTCCACACCGC
CATCGAGAACATCGCCGGCAGCGCCAGCCTACAGGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCAGATGG
CGGCTCCTGGCTCTGCAGCAATAATGCCACGGCCCTCGCAAAAGAGGTATCCGTCGATCAGGATCCGCTGAATCT
CATCTGGCTGGCTGCTCAGTTCAAGGACATGATTGTCTTTCCCTACCTCATGTCAGTAACCCTCTTCCTCTTCAT
CCCCCTTCTCATCTTCACGGACTAACACATCCCAGCATCATCGCCATCATCTTCGCCTTCATCTGCGTCATCCTC
CTCGCCACCTTCCCCGGCTGGCACGAAGAAGAAGATTCCCAAGGCTCAGACCGCATCATCAGGAACTTCCCCTCA
CGCTTCACCTCCCAGATCGCCCTGGCCATCGTCTTCGTCGCCTCCATCTTCGTCCTCGTCTCCGTCCTCTGGCAG
CACACCGCCTCCGTCGCCGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGCAGCGGCGTCGGCACC
AGCGCCATGGTCATGGGCTGGTTCGCCTTTACCCTGCTCATCATCGTCACAATCGGCCTCGTCATCATGATCCTC
AGCATCAGGGTTATAAACGAGTACTTTCCCGATAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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