Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1933
Gene name
LocationContig_188:17398..18682
Strand+
Gene length (bp)1284
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 4.4E-49 20 327

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 13 331 3.0E-44
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 4 331 5.0E-44
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 8 297 3.0E-43
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 2 331 1.0E-39
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 12 331 3.0E-39
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Swissprot ID Swissprot Description Start End E-value
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 13 331 3.0E-44
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 4 331 5.0E-44
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 8 297 3.0E-43
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 2 331 1.0E-39
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 12 331 3.0E-39
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 7 331 2.0E-38
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 4 331 8.0E-38
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 1 331 2.0E-36
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 8 331 4.0E-36
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 3 296 2.0E-34
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 4 331 2.0E-33
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 24 331 2.0E-33
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 7 331 2.0E-33
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 28 331 2.0E-32
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 7 331 3.0E-32
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 5 331 3.0E-30
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 2 331 3.0E-29
sp|O64738|ZIP6_ARATH Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1 21 331 1.0E-27
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 29 331 1.0E-27
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 59 331 1.0E-25
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 24 331 2.0E-24
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 178 298 3.0E-20
sp|Q6L8F9|ZIP6_ORYSJ Zinc transporter 6 OS=Oryza sativa subsp. japonica GN=ZIP6 PE=2 SV=1 171 331 2.0E-19
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 178 331 5.0E-17
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 167 331 2.0E-15
sp|Q5Z653|ZIP10_ORYSJ Zinc transporter 10 OS=Oryza sativa subsp. japonica GN=ZIP10 PE=3 SV=2 178 300 6.0E-15
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 21 89 6.0E-09
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 29 113 8.0E-07
sp|Q55EA1|ZNTD_DICDI Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1 187 330 7.0E-06
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0006810 transport No
GO:0015075 ion transmembrane transporter activity No
GO:0009987 cellular process No
GO:0008324 cation transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0006811 ion transport No
GO:0006812 cation transport No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 97 119 22
4 189 211 22
5 233 255 22
6 267 289 22
7 311 330 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1933
MAGPKPQCGSEKEEQGYDLGLHVLGLFLVLIFSIVGCGFPVVAKKIKWVKIPPKIFFACKHFGTGVLVATAFVHL
LPTAFRSLGDPCLPDLFTDDYPPLPGVIMMVSMFSLFVIEMVLNAKTGGHSHGGPTGHDIAINDKASGVTASTTP
AEEDMVLNDVEACDISPAEFKKMSTNISLLEGGILFHSIFVGMTVSITVDGFVVLLIAILFHQMFEGLGLGSRIA
AVPYPKKSIRPWLLVLAFGTTAPIGQAIGLVSRNSYDEKSALGLIIVGVFNAISAGLLLYAALVDLLAEDFLSDE
ANKLMDGKKKAIAFGWVLFGAAGMSVVGIFA*
Coding >Ophun1|1933
ATGGCTGGTCCAAAGCCACAATGTGGCAGCGAGAAGGAAGAGCAAGGATACGATCTAGGGCTTCACGTACTGGGC
CTTTTCTTGGTTCTGATCTTCTCCATCGTCGGATGTGGCTTTCCAGTTGTCGCCAAGAAAATTAAATGGGTGAAG
ATCCCGCCCAAGATATTCTTCGCCTGCAAACACTTTGGGACGGGCGTCCTCGTCGCCACGGCCTTTGTCCACCTT
CTCCCAACCGCCTTCAGGAGCCTGGGAGACCCGTGTCTACCCGACCTCTTCACAGATGACTATCCGCCGTTGCCC
GGGGTCATCATGATGGTGTCAATGTTCTCCCTGTTTGTCATAGAGATGGTCCTCAACGCCAAGACGGGCGGACAC
TCGCATGGAGGACCTACCGGCCATGACATCGCCATCAACGACAAAGCCTCGGGAGTGACGGCATCAACCACTCCG
GCAGAAGAAGACATGGTATTGAATGATGTGGAAGCCTGCGACATCTCTCCGGCCGAGTTCAAGAAGATGTCGACC
AACATATCGCTTCTCGAGGGCGGTATTCTCTTTCACTCCATCTTTGTCGGCATGACCGTTTCCATCACCGTCGAC
GGTTTCGTCGTCCTCCTCATCGCCATTTTGTTCCACCAAATGTTTGAGGGACTCGGCCTTGGGTCCCGGATCGCA
GCCGTCCCGTATCCAAAGAAGAGCATCCGGCCGTGGCTGCTAGTGCTTGCCTTTGGCACGACGGCACCCATCGGC
CAAGCTATCGGCTTGGTGTCTCGAAACTCGTATGATGAGAAGAGCGCGCTCGGGCTCATCATCGTCGGGGTTTTT
AATGCCATATCGGCTGGCCTTCTCCTATATGCCGCCCTCGTCGATCTGCTGGCCGAAGACTTTTTATCCGACGAG
GCAAACAAGTTGATGGATGGCAAGAAGAAAGCAATCGCTTTTGGCTGGGTCCTCTTCGGAGCTGCCGGCATGTCC
GTCGTCGGAATCTTTGCCTGA
Transcript >Ophun1|1933
ATGGCTGGTCCAAAGCCACAATGTGGCAGCGAGAAGGAAGAGCAAGGATACGATCTAGGGCTTCACGTACTGGGC
CTTTTCTTGGTTCTGATCTTCTCCATCGTCGGATGTGGCTTTCCAGTTGTCGCCAAGAAAATTAAATGGGTGAAG
ATCCCGCCCAAGATATTCTTCGCCTGCAAACACTTTGGGACGGGCGTCCTCGTCGCCACGGCCTTTGTCCACCTT
CTCCCAACCGCCTTCAGGAGCCTGGGAGACCCGTGTCTACCCGACCTCTTCACAGATGACTATCCGCCGTTGCCC
GGGGTCATCATGATGGTGTCAATGTTCTCCCTGTTTGTCATAGAGATGGTCCTCAACGCCAAGACGGGCGGACAC
TCGCATGGAGGACCTACCGGCCATGACATCGCCATCAACGACAAAGCCTCGGGAGTGACGGCATCAACCACTCCG
GCAGAAGAAGACATGGTATTGAATGATGTGGAAGCCTGCGACATCTCTCCGGCCGAGTTCAAGAAGATGTCGACC
AACATATCGCTTCTCGAGGGCGGTATTCTCTTTCACTCCATCTTTGTCGGCATGACCGTTTCCATCACCGTCGAC
GGTTTCGTCGTCCTCCTCATCGCCATTTTGTTCCACCAAATGTTTGAGGGACTCGGCCTTGGGTCCCGGATCGCA
GCCGTCCCGTATCCAAAGAAGAGCATCCGGCCGTGGCTGCTAGTGCTTGCCTTTGGCACGACGGCACCCATCGGC
CAAGCTATCGGCTTGGTGTCTCGAAACTCGTATGATGAGAAGAGCGCGCTCGGGCTCATCATCGTCGGGGTTTTT
AATGCCATATCGGCTGGCCTTCTCCTATATGCCGCCCTCGTCGATCTGCTGGCCGAAGACTTTTTATCCGACGAG
GCAAACAAGTTGATGGATGGCAAGAAGAAAGCAATCGCTTTTGGCTGGGTCCTCTTCGGAGCTGCCGGCATGTCC
GTCGTCGGAATCTTTGCCTGA
Gene >Ophun1|1933
ATGGCTGGTCCAAAGCCACAATGTGGCAGCGAGAAGGAAGAGCAAGGATACGATCTAGGGCTTCACGTACTGGGC
CTTTGTGAGTTGCCCAAATGTCCCATTTTTGGCATGTGACGAGCTAACCGGCGGCGAAACAACAGTCTTGGTTCT
GATCTTCTCCATCGTCGGTATGCGGCAGCAACCAGCCTGTCTGTCCCCTTGGACTCTCGAGAGCTGACGCCCTGA
GCAGGATGTGGCTTTCCAGTTGTCGCCAAGAAAATTAAATGGGTGAAGATCCCGCCCAAGATATTCTTCGCCTGC
AAACACTTTGGGACGGGCGTCCTCGTCGCCACGGCCTTTGTCCACGTCAGTTTCCCTTGAGCTCCGCTGCCACAC
GTCGACTGACTCGCAACAACAGCTTCTCCCAACCGCCTTCAGGAGCCTGGGAGACCCGTGTCTACCCGACCTCTT
CACAGATGACTATCCGCCGTTGCCCGGGGTCATCATGATGGTGTCAATGTTCTCCCTGTTTGTCATAGAGATGGT
CCTCAACGCCAAGACGGGCGGACACTCGCATGGAGGACCTACCGGCCATGACATCGCCATCAACGACAAAGCCTC
GGGAGTGACGGCATCAACCACTCCGGCAGAAGAAGACATGGTATTGAATGATGTGGAAGCCTGCGACATCTCTCC
GGCCGAGTTCAAGAAGATGTCGACCAACATATCGCTTCTCGAGGGCGGTATTCTCTTTCACTCCATCTTTGTCGG
CATGACCGTTTCCATCACCGTCGACGGTTTCGTCGTCCTCCTCATCGCCATTTTGTTCCACCAAATGTTTGAGGG
ACTCGGCCTTGGGTCCCGGATCGCAGCCGTCCCGTATCCAAAGAAGAGCATCCGGCCGTGGCTGCTAGTGCTTGC
CTTTGGCACGACGGCACCCATCGGCCAAGCTATCGGCTTGGTGTCTCGAAACTCGTATGATGAGAAGAGCGCGCT
CGGGCTCATCATCGTCGGGGTTTTTAATGCCATGTAAGGACCGCTACAGTCCCGCGTCGAGAATTGACACTAACA
AGTCGTTGATGAAACAGATCGGCTGGCCTTCTCCTATATGCCGCCCTCGTCGATCTGCTGGCCGAAGACTTTTTA
TCCGACGAGGCAAACAAGTTGATGGATGGCAAGAAGAAAGCAATCGCTTTTGGCTGGGTCCTCTTCGGAGGTGAG
TTGCTCTAATTACTGGGATCAGTTCAACCGCTGACGACAAGACTTTAAGCTGCCGGCATGTCCGTCGTCGGAATC
TTTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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