Protein ID | Ophun1|1925 |
Gene name | |
Location | Contig_187:27257..29119 |
Strand | - |
Gene length (bp) | 1862 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1296 |
Protein length (aa) | 432 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13938|YEP4_SCHPO | UPF0658 Golgi apparatus membrane protein C23H3.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.04 PE=3 SV=3 | 91 | 401 | 1.0E-44 |
sp|Q9UUJ8|YLOA_SCHPO | UPF0658 Golgi apparatus membrane protein C1952.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.10c PE=3 SV=1 | 77 | 431 | 4.0E-27 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 96 | 118 | 22 |
2 | 142 | 161 | 19 |
3 | 168 | 190 | 22 |
4 | 222 | 244 | 22 |
5 | 270 | 292 | 22 |
6 | 302 | 321 | 19 |
7 | 328 | 346 | 18 |
8 | 366 | 388 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 1431 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1925 MARETLPPGFSLHSPFALFSSPVLATRTSSLDYNSKYSREFGQAYPQPAYSQPAYAENANLNAGFDQGYAYRQGL ASSNPARSVYRDRMSFLKSKWPAAFMAVASLQAIVCLAFESFVFACFQSSLGRWDNKPDVQSQYKTIPTFLTLII FGFLYELVVVWDALRMKNTIQVIGVCIANLALLVYTAIQVDQIQMAISTLGIAALKPGITPDQVWSQARPFLVAI PAIIALATAAMVFIAWKLYQEFAWDILKNIGADYRMKKRFLHYQIYIALLKFDFFFFLGFIIQFVVIVAQKTDPE FALTIATIPVTICILLAAAYFTRRENKLGMMAVIILYLGGLIYFIFKLVRIYQPAYRLFYLPVRKSLTAFAVITI LLILLTIANAVICMGNFDKGLKAHLLTPRRMDEKPDAHSISLHDVKPQIPSRMTID* |
Coding | >Ophun1|1925 ATGGCGCGTGAGACGCTACCGCCGGGCTTTTCGTTGCATTCTCCGTTCGCACTGTTCTCGTCGCCCGTCCTGGCT ACCAGGACGTCGTCTCTCGATTACAACTCAAAGTACTCGCGCGAATTCGGCCAGGCCTACCCGCAGCCCGCATAC TCGCAGCCCGCATACGCGGAGAATGCCAATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGGCCTG GCCTCGTCCAACCCGGCCAGGAGCGTCTACCGCGACAGGATGAGCTTCCTCAAGTCCAAATGGCCCGCCGCCTTC ATGGCCGTCGCCAGTCTCCAGGCCATCGTTTGCCTGGCATTTGAGTCATTTGTCTTTGCTTGCTTCCAGTCGAGC CTTGGCCGTTGGGACAACAAACCCGACGTTCAGTCCCAATACAAGACGATTCCCACCTTCTTGACCCTCATCATC TTTGGCTTCCTGTACGAGCTGGTCGTCGTCTGGGATGCGCTGCGGATGAAGAACACCATCCAGGTCATTGGCGTA TGCATCGCCAACCTGGCCCTGCTCGTCTACACCGCCATCCAGGTCGACCAGATTCAAATGGCCATCAGCACCCTC GGTATCGCCGCCCTAAAGCCCGGCATCACCCCGGACCAGGTCTGGTCTCAGGCCAGGCCCTTCCTCGTCGCCATC CCTGCCATCATCGCCCTCGCCACCGCCGCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGAT ATTCTCAAGAACATTGGCGCCGACTACCGCATGAAGAAGCGCTTCCTTCACTATCAGATCTATATTGCCCTCCTC AAGTTCGACTTCTTCTTCTTCCTCGGCTTCATCATCCAATTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAG TTCGCCCTTACCATCGCCACCATCCCCGTCACCATCTGCATCCTACTCGCCGCCGCCTACTTCACCCGCCGCGAG AACAAGCTCGGCATGATGGCCGTCATCATCCTCTACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGC ATCTATCAGCCCGCCTATAGGCTCTTCTACCTACCCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATC CTATTGATCCTCCTCACCATTGCAAATGCCGTCATCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTA CTCACCCCCCGCCGGATGGACGAGAAGCCCGATGCGCACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCC AGCCGGATGACCATCGACTAA |
Transcript | >Ophun1|1925 ATGGCGCGTGAGACGCTACCGCCGGGCTTTTCGTTGCATTCTCCGTTCGCACTGTTCTCGTCGCCCGTCCTGGCT ACCAGGACGTCGTCTCTCGATTACAACTCAAAGTACTCGCGCGAATTCGGCCAGGCCTACCCGCAGCCCGCATAC TCGCAGCCCGCATACGCGGAGAATGCCAATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGGCCTG GCCTCGTCCAACCCGGCCAGGAGCGTCTACCGCGACAGGATGAGCTTCCTCAAGTCCAAATGGCCCGCCGCCTTC ATGGCCGTCGCCAGTCTCCAGGCCATCGTTTGCCTGGCATTTGAGTCATTTGTCTTTGCTTGCTTCCAGTCGAGC CTTGGCCGTTGGGACAACAAACCCGACGTTCAGTCCCAATACAAGACGATTCCCACCTTCTTGACCCTCATCATC TTTGGCTTCCTGTACGAGCTGGTCGTCGTCTGGGATGCGCTGCGGATGAAGAACACCATCCAGGTCATTGGCGTA TGCATCGCCAACCTGGCCCTGCTCGTCTACACCGCCATCCAGGTCGACCAGATTCAAATGGCCATCAGCACCCTC GGTATCGCCGCCCTAAAGCCCGGCATCACCCCGGACCAGGTCTGGTCTCAGGCCAGGCCCTTCCTCGTCGCCATC CCTGCCATCATCGCCCTCGCCACCGCCGCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGAT ATTCTCAAGAACATTGGCGCCGACTACCGCATGAAGAAGCGCTTCCTTCACTATCAGATCTATATTGCCCTCCTC AAGTTCGACTTCTTCTTCTTCCTCGGCTTCATCATCCAATTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAG TTCGCCCTTACCATCGCCACCATCCCCGTCACCATCTGCATCCTACTCGCCGCCGCCTACTTCACCCGCCGCGAG AACAAGCTCGGCATGATGGCCGTCATCATCCTCTACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGC ATCTATCAGCCCGCCTATAGGCTCTTCTACCTACCCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATC CTATTGATCCTCCTCACCATTGCAAATGCCGTCATCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTA CTCACCCCCCGCCGGATGGACGAGAAGCCCGATGCGCACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCC AGCCGGATGACCATCGACTAA |
Gene | >Ophun1|1925 ATGGCGCGTGAGACGCTACCGCCGGGCTTTTCGTTGCATTCTCCGTTCGCACTGTTCTCGGTACAACATCACGCG CCCGTTTCCCGCTCCGTTCTTGCGCCACCCTCGTTCTCCTCGTTTATCCATCATCGTCACTCTCATCCACAGTCT CTCGTTCAGCCGGCACGCCTGTCATTCGTCCTTTCTTTTCAAACGAGTCCGCTCCTCTGAGAAACCTCTACTTCA CTTCCTACGGGTGTCCTCGACTTCGCCACAACATCAAGATAAAAATAACCCACCGAGAAAAAAAAGCAAAGAAAC GGAGGCCCAGAAAAAAGCGCATCTCACCACCCCTTCACCCTTCCAATCTATCCCGCTCTCGCCCGCCATCGACTA CGACGACGACGACGACGAGACGACGACAACTACAACGATTCCCCAGACGTCGAATCCCCGCTGACTCCCGGTCGG AGTCGCCCAGTCGCCCGTCCTGGCTACCAGGTCAGATTCCGCTCCCCCCTTCCGCTCTTCTCTCTCCCGCTCACG TCGCAGCAGGACGTCGTCTCTCGATTACAACTCAAAGTACTCGCGCGAATTCGGCCAGGCCTACCCGCAGCCCGC ATACTCGCAGCCCGCATACGCGGAGAATGCCAATCTGAACGCTGGCTTCGATCAGGGCTACGCCTATCGCCAGGG CCTGGCCTCGTCCAACCCGGCCAGGAGCGTCTACCGCGACAGGATGAGCTTCCTCAAGTCCAAATGGCCCGCCGC CTTCATGGCCGTCGCCAGTCTCCAGGCCATCGTTTGCCTGGCATTTGAGTCGTACGCCACCTGTCGTCACCCCCT TGGACGCCCGCTTACCCGCTTGTGACAGATTTGTCTTTGCTTGCTTCCAGTCGAGCCTTGGCCGTTGGGACAACA AACCCGACGTTCAGTCCCAATACAAGACGATTCCCACCTTCTTGACCCTCATCATCTTTGGCTTCCTGTACGAGC TGGTCGTCGTCTGGGATGCGCTGCGGATGAAGAACACCATCCAGGTCATTGGCGTATGCATCGCCAACCTGGCCC TGCTCGTCTACACCGCCATCCAGGTCGACCAGATTCAAATGGCCATCAGCACCCTCGGTATCGCCGCCCTAAAGC CCGGCATCACCCCGGACCAGGTCTGGTCTCAGGCCAGGCCCTTCCTCGTCGCCATCCCTGCCATCATCGCCCTCG CCACCGCCGCCATGGTCTTCATCGCCTGGAAGCTCTACCAGGAGTTTGCCTGGGATATTCTCAAGAACATTGGCG CCGACTACCGCATGAAGAAGCGCTTCCTTCACTATCAGGTTCGTCACCAATATCGTCTCATCGACACTGCCAACG CAAGACTCACCCCCTCTTCCCAGATCTATATTGCCCTCCTCAAGTTCGACTTCTTCTTCTTCCTCGGCTTCATCA TCCAATTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAGTTCGCCCTTACCATCGCCACCATCCCCGTCACCA TCTGCATCCTACTCGCCGCCGCCTACTTCACCCGCCGCGAGAACAAGCTCGGCATGATGGCCGTCATCATCCTCT ACCTCGGCGGCCTCATCTACTTCATCTTCAAGCTCGTCCGCATCTATCAGCCCGCCTATAGGCTCTTCTACCTAC CCGTCCGCAAGTCCCTAACCGCCTTTGCCGTCATCACCATCCTATTGATCCTCCTCACCATTGCAAATGCCGTCA TCTGCATGGGCAACTTTGACAAGGGGCTCAAGGCTCACCTACTCACCCCCCGCCGGATGGACGAGAAGCCCGATG CGCACTCCATCAGTCTGCACGACGTCAAGCCGCAGATTCCCAGCCGGATGACCATCGACTAA |