© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1924 |
| Gene name | |
| Location | Contig_187:25054..26474 |
| Strand | + |
| Gene length (bp) | 1420 |
| Transcript length (bp) | 1311 |
| Coding sequence length (bp) | 1311 |
| Protein length (aa) | 437 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10607 | CTLH | CTLH/CRA C-terminal to LisH motif domain | 2.1E-29 | 191 | 343 |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | 1.0E-07 | 381 | 420 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9H871|RMD5A_HUMAN | Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1 | 57 | 436 | 1.0E-52 |
| sp|Q80YQ8|RMD5A_MOUSE | Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2 | 57 | 436 | 1.0E-52 |
| sp|Q6GLP4|RMD5A_XENLA | Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1 | 20 | 436 | 9.0E-52 |
| sp|Q91YQ7|RMD5B_MOUSE | Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1 | 57 | 436 | 1.0E-50 |
| sp|Q96G75|RMD5B_HUMAN | Protein RMD5 homolog B OS=Homo sapiens GN=RMND5B PE=1 SV=1 | 57 | 436 | 4.0E-50 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9H871|RMD5A_HUMAN | Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1 | 57 | 436 | 1.0E-52 |
| sp|Q80YQ8|RMD5A_MOUSE | Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2 | 57 | 436 | 1.0E-52 |
| sp|Q6GLP4|RMD5A_XENLA | Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1 | 20 | 436 | 9.0E-52 |
| sp|Q91YQ7|RMD5B_MOUSE | Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1 | 57 | 436 | 1.0E-50 |
| sp|Q96G75|RMD5B_HUMAN | Protein RMD5 homolog B OS=Homo sapiens GN=RMND5B PE=1 SV=1 | 57 | 436 | 4.0E-50 |
| sp|Q640V2|RMD5A_XENTR | Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1 | 57 | 436 | 4.0E-50 |
| sp|O59668|YB83_SCHPO | LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.03c PE=3 SV=1 | 191 | 436 | 9.0E-47 |
| sp|Q12508|RMD5_YEAST | Sporulation protein RMD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD5 PE=3 SV=1 | 43 | 436 | 2.0E-28 |
| sp|Q4VC33|MAEA_MOUSE | Macrophage erythroblast attacher OS=Mus musculus GN=Maea PE=1 SV=1 | 201 | 434 | 4.0E-11 |
| sp|Q5RKJ1|MAEA_RAT | Macrophage erythroblast attacher OS=Rattus norvegicus GN=Maea PE=2 SV=2 | 201 | 434 | 4.0E-11 |
| sp|Q5R532|MAEA_PONAB | Macrophage erythroblast attacher OS=Pongo abelii GN=MAEA PE=2 SV=1 | 201 | 434 | 6.0E-11 |
| sp|Q7L5Y9|MAEA_HUMAN | Macrophage erythroblast attacher OS=Homo sapiens GN=MAEA PE=1 SV=1 | 201 | 434 | 6.0E-11 |
| sp|Q4R9A8|MAEA_MACFA | Macrophage erythroblast attacher OS=Macaca fascicularis GN=MAEA PE=2 SV=1 | 201 | 434 | 7.0E-11 |
| sp|Q7SXR3|MAEA_DANRE | Macrophage erythroblast attacher OS=Danio rerio GN=maea PE=2 SV=2 | 201 | 420 | 1.0E-09 |
| sp|Q5F398|MAEA_CHICK | Macrophage erythroblast attacher OS=Gallus gallus GN=MAEA PE=2 SV=1 | 201 | 420 | 1.0E-08 |
| sp|Q6GR10|MAEA_XENLA | Macrophage erythroblast attacher OS=Xenopus laevis GN=maea PE=2 SV=2 | 201 | 420 | 2.0E-08 |
| sp|Q3MHJ2|MAEA_BOVIN | Macrophage erythroblast attacher OS=Bos taurus GN=MAEA PE=2 SV=1 | 225 | 434 | 5.0E-08 |
| sp|Q5AS80|FYV10_EMENI | Protein fyv10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fyv10 PE=3 SV=2 | 209 | 340 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1924 MSGHDDEGSSPFAPLLAELARMRKSNLSAAIDDVDSIIDLLLKAREQVARDDDAHKIGMAMTTLQNPVKAQLEAI TNDLKEVTKAQKSFGKALDKALPLRELPMETDAMADHPALINRAIAMHLLREGQFSVASTVLREEQEQRRHSESS SADTTPSHTPDSDGDDDMMKPRETPNMDDMQSLSQDLQGRFSEMYDILAHLKRRNLAPAIEWAHVHNAPLDAKGS NLEFDLCKLQFVWLFKGPSQNGLADDANNGQSGALAYARSHFSRFQSRHAKEIQQLCCAMLYAPNLAASPYKAMF EIDSAFDDVATSFTREFCSLLGLSAESPLYMAVTAGSIALPRLIKYTTYTREKKTEWTTENELAFETPLPESMIF HPIFVCPVSKEQTTVQNPAMMLTCGHVICRDSLHRIAKGSRYKCPYCPTEGHVRDALKISF* |
| Coding | >Ophun1|1924 ATGTCCGGGCATGACGACGAGGGCTCCTCGCCCTTTGCGCCGCTGCTGGCTGAGCTGGCCCGCATGAGGAAGTCG AATCTATCAGCCGCCATAGACGACGTCGATAGCATCATTGATCTACTCTTGAAGGCGAGGGAGCAGGTCGCTCGA GATGACGACGCCCACAAGATCGGCATGGCCATGACGACGCTCCAGAACCCGGTCAAGGCACAGCTCGAAGCCATA ACAAACGATCTCAAGGAGGTGACCAAGGCGCAGAAGAGTTTCGGCAAGGCCCTCGACAAGGCTCTCCCGCTCCGC GAACTCCCAATGGAAACAGACGCAATGGCAGACCATCCCGCCCTCATCAACCGCGCCATCGCCATGCACCTCCTC CGAGAAGGCCAATTCTCCGTCGCATCAACAGTCCTCCGAGAAGAACAAGAACAGCGACGACACAGCGAATCATCA TCCGCAGACACAACCCCCTCCCACACCCCCGACTCAGACGGCGACGACGACATGATGAAACCGCGAGAAACCCCC AACATGGACGACATGCAATCCCTCTCCCAAGACCTCCAAGGCCGCTTCTCCGAAATGTACGACATCCTCGCCCAC CTCAAGCGCCGCAACCTCGCCCCAGCTATAGAATGGGCACACGTGCACAACGCCCCCCTCGACGCAAAAGGAAGC AACCTAGAATTCGACCTCTGCAAGCTCCAATTCGTCTGGCTCTTCAAAGGCCCCTCACAAAACGGCCTCGCCGAC GACGCAAACAACGGCCAAAGCGGCGCCCTAGCCTACGCGAGAAGCCACTTCTCCCGCTTCCAGTCCCGCCACGCA AAGGAGATCCAACAGCTCTGCTGCGCCATGCTCTACGCCCCCAACCTCGCCGCCTCGCCCTACAAAGCAATGTTC GAAATCGACTCGGCCTTTGACGACGTCGCCACCTCCTTCACCCGCGAGTTCTGCTCCCTCCTCGGCCTATCCGCC GAATCGCCCCTCTACATGGCCGTCACAGCCGGCTCCATCGCCCTCCCCCGCCTCATCAAGTACACCACCTACACG CGCGAGAAGAAGACGGAGTGGACGACGGAAAACGAACTCGCCTTCGAAACCCCCCTCCCCGAATCCATGATATTC CACCCCATCTTCGTCTGCCCCGTCAGCAAGGAGCAGACAACGGTCCAGAACCCGGCCATGATGCTCACCTGCGGC CACGTCATCTGCCGCGACAGCCTGCACAGGATCGCAAAGGGCTCGCGCTACAAGTGTCCCTACTGCCCGACAGAG GGACACGTGCGGGACGCCCTCAAGATTTCATTCTGA |
| Transcript | >Ophun1|1924 ATGTCCGGGCATGACGACGAGGGCTCCTCGCCCTTTGCGCCGCTGCTGGCTGAGCTGGCCCGCATGAGGAAGTCG AATCTATCAGCCGCCATAGACGACGTCGATAGCATCATTGATCTACTCTTGAAGGCGAGGGAGCAGGTCGCTCGA GATGACGACGCCCACAAGATCGGCATGGCCATGACGACGCTCCAGAACCCGGTCAAGGCACAGCTCGAAGCCATA ACAAACGATCTCAAGGAGGTGACCAAGGCGCAGAAGAGTTTCGGCAAGGCCCTCGACAAGGCTCTCCCGCTCCGC GAACTCCCAATGGAAACAGACGCAATGGCAGACCATCCCGCCCTCATCAACCGCGCCATCGCCATGCACCTCCTC CGAGAAGGCCAATTCTCCGTCGCATCAACAGTCCTCCGAGAAGAACAAGAACAGCGACGACACAGCGAATCATCA TCCGCAGACACAACCCCCTCCCACACCCCCGACTCAGACGGCGACGACGACATGATGAAACCGCGAGAAACCCCC AACATGGACGACATGCAATCCCTCTCCCAAGACCTCCAAGGCCGCTTCTCCGAAATGTACGACATCCTCGCCCAC CTCAAGCGCCGCAACCTCGCCCCAGCTATAGAATGGGCACACGTGCACAACGCCCCCCTCGACGCAAAAGGAAGC AACCTAGAATTCGACCTCTGCAAGCTCCAATTCGTCTGGCTCTTCAAAGGCCCCTCACAAAACGGCCTCGCCGAC GACGCAAACAACGGCCAAAGCGGCGCCCTAGCCTACGCGAGAAGCCACTTCTCCCGCTTCCAGTCCCGCCACGCA AAGGAGATCCAACAGCTCTGCTGCGCCATGCTCTACGCCCCCAACCTCGCCGCCTCGCCCTACAAAGCAATGTTC GAAATCGACTCGGCCTTTGACGACGTCGCCACCTCCTTCACCCGCGAGTTCTGCTCCCTCCTCGGCCTATCCGCC GAATCGCCCCTCTACATGGCCGTCACAGCCGGCTCCATCGCCCTCCCCCGCCTCATCAAGTACACCACCTACACG CGCGAGAAGAAGACGGAGTGGACGACGGAAAACGAACTCGCCTTCGAAACCCCCCTCCCCGAATCCATGATATTC CACCCCATCTTCGTCTGCCCCGTCAGCAAGGAGCAGACAACGGTCCAGAACCCGGCCATGATGCTCACCTGCGGC CACGTCATCTGCCGCGACAGCCTGCACAGGATCGCAAAGGGCTCGCGCTACAAGTGTCCCTACTGCCCGACAGAG GGACACGTGCGGGACGCCCTCAAGATTTCATTCTGA |
| Gene | >Ophun1|1924 ATGTCCGGGCATGACGACGAGGGCTCCTCGCCCTTTGCGCCGCTGCTGGCTGAGCTGGCCCGCATGAGGAAGTCG AATCTATCAGCCGCCATAGACGACGTCGATAGCATCATTGATCTACTCTTGAAGGCGAGGGAGCAGGTCGCTCGA GGTAAGCGCCTCACCTCGAGCGTGGCCATCGCGACGGCTTTCCTGACGGTTTGGCAGATGACGACGCCCACAAGA TCGGCATGGCCATGACGACGCTCCAGAACCCGGTCAAGGCACAGCTCGAAGCCATAACAAACGATCTCAAGGAGG TGACCAAGGCGCAGAAGAGTTTCGGCAAGGCCCTCGACAAGGTCCGTCACCTTCAACCCCCCGAATACCTCTCTA ACACTCCCCCCCCCCTTAGGCTCTCCCGCTCCGCGAACTCCCAATGGAAACAGACGCAATGGCAGACCATCCCGC CCTCATCAACCGCGCCATCGCCATGCACCTCCTCCGAGAAGGCCAATTCTCCGTCGCATCAACAGTCCTCCGAGA AGAACAAGAACAGCGACGACACAGCGAATCATCATCCGCAGACACAACCCCCTCCCACACCCCCGACTCAGACGG CGACGACGACATGATGAAACCGCGAGAAACCCCCAACATGGACGACATGCAATCCCTCTCCCAAGACCTCCAAGG CCGCTTCTCCGAAATGTACGACATCCTCGCCCACCTCAAGCGCCGCAACCTCGCCCCAGCTATAGAATGGGCACA CGTGCACAACGCCCCCCTCGACGCAAAAGGAAGCAACCTAGAATTCGACCTCTGCAAGCTCCAATTCGTCTGGCT CTTCAAAGGCCCCTCACAAAACGGCCTCGCCGACGACGCAAACAACGGCCAAAGCGGCGCCCTAGCCTACGCGAG AAGCCACTTCTCCCGCTTCCAGTCCCGCCACGCAAAGGAGATCCAACAGCTCTGCTGCGCCATGCTCTACGCCCC CAACCTCGCCGCCTCGCCCTACAAAGCAATGTTCGAAATCGACTCGGCCTTTGACGACGTCGCCACCTCCTTCAC CCGCGAGTTCTGCTCCCTCCTCGGCCTATCCGCCGAATCGCCCCTCTACATGGCCGTCACAGCCGGCTCCATCGC CCTCCCCCGCCTCATCAAGTACACCACCTACACGCGCGAGAAGAAGACGGAGTGGACGACGGAAAACGAACTCGC CTTCGAAACCCCCCTCCCCGAATCCATGATATTCCACCCCATCTTCGTCTGCCCCGTCAGCAAGGAGCAGACAAC GGTCCAGAACCCGGCCATGATGCTCACCTGCGGCCACGTCATCTGCCGCGACAGCCTGCACAGGATCGCAAAGGG CTCGCGCTACAAGTGTCCCTACTGCCCGACAGAGGGACACGTGCGGGACGCCCTCAAGATTTCATTCTGA |