Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|1911
Gene name
Location	Contig_186:24822..27639
Strand	+
Gene length (bp)	2817
Transcript length (bp)	2445
Coding sequence length (bp)	2445
Protein length (aa)	815

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01585	G-patch	G-patch domain	4.3E-09	733	776

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P87143\|YDMD_SCHPO	Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=3 SV=1	150	780	2.0E-20
sp\|A4IGK4\|RBM5_XENTR	RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1	630	814	3.0E-12
sp\|A0JMV4\|RBM5A_XENLA	RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1	634	814	1.0E-10
sp\|Q6DDU9\|RBM5B_XENLA	RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1	654	814	1.0E-10
sp\|B2GV05\|RBM5_RAT	RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=1 SV=1	630	814	5.0E-10

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P87143\|YDMD_SCHPO	Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=3 SV=1	150	780	2.0E-20
sp\|A4IGK4\|RBM5_XENTR	RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1	630	814	3.0E-12
sp\|A0JMV4\|RBM5A_XENLA	RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1	634	814	1.0E-10
sp\|Q6DDU9\|RBM5B_XENLA	RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1	654	814	1.0E-10
sp\|B2GV05\|RBM5_RAT	RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=1 SV=1	630	814	5.0E-10
sp\|Q91YE7\|RBM5_MOUSE	RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1	630	814	5.0E-10
sp\|Q1RMU5\|RBM5_BOVIN	RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1	630	781	5.0E-10
sp\|P52756\|RBM5_HUMAN	RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2	630	781	6.0E-10
sp\|P70501\|RBM10_RAT	RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=1 SV=1	630	781	6.0E-10
sp\|Q99KG3\|RBM10_MOUSE	RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1	630	781	6.0E-10
sp\|P98175\|RBM10_HUMAN	RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3	630	781	6.0E-10
sp\|A4IGK4\|RBM5_XENTR	RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1	129	344	2.0E-08
sp\|Q6DDU9\|RBM5B_XENLA	RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1	101	362	8.0E-06

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GO

GO Term	Description	Terminal node
GO:0003676	nucleic acid binding	Yes
GO:0097159	organic cyclic compound binding	No
GO:0003674	molecular_function	No
GO:1901363	heterocyclic compound binding	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|1911 MHDDYPSRSPSRGRDRDLGLFRERDDEAGQRDDADFRDDRYRLRQDPHGDQQERSLRYPRGGGDRLTGYYDDRRD DRYRARDDGYSHASRRDVDSRRSQFDDRVGRDYRGYRGDERDYRSERDYRDERDYRDERDHRAGRDYQAHRDYHD MYDDGPRRDHDRRRDRPRESRDQDEPRHEDNGRSRHHHDDHGLGHRQRSPSRNRIRDAGRPTDTVVLEGVPRSIN ALILREGLLASSVAIKFPTIEVRVAKPQEGSSRAFVQFKNVDDATTFVKEHFPHLVVFLMQSTDDIPDGKFQVFL HFSRNPGAEGEASQGPAGSRWRCATCGKYNSRRTKCERCNAAQVSGGPTGRTGPAQLARDVDTKVQILCVWPLPS HIDEDQLAVEMKRLELVKEEKPQEETHKLKSTAPSVDGAGYGARPGSLHRVFMVREVATNIKMTFGFAEFWTLND AYAALRKHQMTRSFQIAGTPVTAGLIHIGVFVQEDRPITPTIDFMSFVPLFNPSLRVRYRDLDLYASPKLVTSEA PQSEEETAKTKAKKRKADEPLSESTTKKLPVTAAPVMAAQMALWQRRHEEIAQGPAAGHLPPGASVKFSMPFSGQ AAKPQRVKTEPAAPAPAPAAVTPAEETPSEVSYVDRSLMICFLCTKRYKSVEELDKHQGSQYHRRQMGNKDKVAA ALPMVAARDKAQKAEPAQYRDRAKERREAHNQPDKPDPKPQPGQTQEAPRDDSKKAGESKGAGMLAKMGWSAGSG LGAQGAGLTEALTASAYKGGVGLGAEGGKLGDAAEIAEGRTTDSYASYLTAAQQKARERYSQME*
Coding	>Ophun1\|1911 ATGCACGACGACTATCCTTCACGATCGCCCAGCCGAGGGCGGGACCGTGATCTGGGCTTGTTCCGCGAAAGAGAC GACGAAGCAGGCCAGAGAGACGACGCCGACTTCAGAGACGACCGCTACCGATTGCGGCAGGACCCGCACGGCGAC CAGCAGGAAAGGTCTCTGCGCTATCCTCGCGGCGGAGGGGACCGCCTCACGGGCTACTATGATGACCGCCGTGAT GATCGCTACCGTGCTCGAGATGATGGATATTCCCACGCCTCTCGCCGCGATGTGGACTCACGCCGCTCGCAGTTT GATGATCGGGTTGGACGGGACTATCGAGGCTATCGAGGAGACGAGCGAGACTATCGATCCGAACGGGATTATCGC GACGAGCGGGACTATCGCGACGAGCGGGACCATCGTGCCGGGCGAGACTACCAGGCTCACCGGGACTACCACGAC ATGTACGATGATGGCCCTCGACGCGATCACGACCGTCGACGCGATAGGCCTCGCGAATCTCGTGACCAGGATGAG CCTCGGCATGAAGACAACGGCAGAAGCCGCCACCATCATGATGACCACGGACTGGGCCACCGTCAGAGGAGCCCG TCTCGCAACCGAATTCGCGATGCCGGAAGACCGACGGATACTGTCGTGTTGGAAGGTGTTCCTCGGAGCATCAAT GCATTGATTCTGCGAGAAGGTCTCCTCGCCTCGTCCGTCGCCATCAAATTCCCAACAATCGAGGTGCGAGTTGCC AAGCCACAAGAGGGCAGCTCAAGGGCCTTTGTACAGTTCAAAAATGTCGACGATGCGACCACTTTCGTCAAAGAG CATTTCCCGCATCTTGTCGTCTTTCTGATGCAATCCACTGATGACATACCAGATGGCAAGTTTCAAGTCTTCCTT CACTTCTCTCGCAACCCCGGGGCCGAGGGAGAAGCCTCGCAGGGTCCTGCTGGCTCCAGGTGGCGATGCGCGACG TGCGGAAAATACAACTCAAGGCGTACTAAATGCGAAAGATGCAATGCTGCGCAAGTTAGCGGAGGACCGACCGGG CGCACTGGGCCTGCTCAACTTGCCAGAGATGTCGATACCAAGGTGCAGATCCTATGCGTCTGGCCGTTGCCATCC CATATCGACGAGGACCAGCTGGCCGTGGAGATGAAGCGACTGGAACTCGTCAAAGAAGAGAAGCCCCAGGAAGAG ACGCACAAGCTCAAGTCGACGGCGCCTTCTGTGGACGGAGCCGGCTACGGGGCGCGGCCCGGGTCGCTGCATCGC GTTTTCATGGTGCGAGAGGTTGCAACCAACATCAAGATGACCTTTGGCTTTGCCGAGTTCTGGACGCTCAACGAC GCGTACGCGGCCTTGCGAAAACACCAGATGACGCGCTCCTTTCAGATTGCGGGCACACCGGTCACGGCTGGACTT ATTCACATCGGCGTCTTCGTCCAGGAGGATCGACCCATCACGCCGACCATTGATTTCATGTCATTTGTGCCCCTC TTCAATCCGTCACTGCGGGTGAGATATCGAGACCTGGACTTGTACGCCAGTCCCAAGCTCGTCACCTCAGAGGCC CCCCAATCTGAAGAGGAGACGGCCAAGACGAAGGCGAAGAAGCGCAAAGCGGACGAGCCCCTGTCCGAGTCGACG ACCAAAAAGCTCCCAGTCACGGCGGCCCCGGTCATGGCGGCGCAGATGGCCCTCTGGCAGCGCAGGCACGAGGAG ATTGCACAGGGTCCCGCGGCAGGCCATTTGCCTCCCGGGGCATCGGTCAAGTTCTCGATGCCTTTCTCGGGCCAG GCGGCCAAGCCGCAGCGTGTCAAGACGGAGCCTGCAGCTCCAGCCCCGGCCCCGGCGGCAGTGACCCCGGCGGAA GAGACACCCAGCGAGGTGTCGTACGTCGATCGCAGCCTGATGATTTGTTTTCTCTGTACAAAGAGATACAAATCG GTCGAGGAGCTCGACAAACATCAAGGGTCCCAGTACCATCGACGGCAGATGGGAAACAAGGACAAGGTGGCGGCG GCGCTGCCGATGGTGGCGGCCCGAGACAAGGCCCAAAAGGCCGAGCCGGCGCAGTACCGCGACCGGGCCAAGGAG CGACGGGAGGCTCACAACCAGCCCGACAAGCCGGACCCGAAGCCTCAGCCGGGACAGACCCAGGAAGCGCCCCGG GACGACAGCAAGAAGGCGGGCGAGTCAAAGGGCGCCGGCATGCTGGCCAAGATGGGGTGGTCGGCCGGGAGCGGA CTCGGCGCTCAGGGAGCGGGCCTGACGGAGGCCCTGACGGCGAGCGCCTACAAGGGCGGCGTGGGACTAGGTGCC GAGGGCGGCAAGCTGGGGGACGCGGCTGAGATTGCCGAGGGGAGGACGACTGATAGCTACGCCAGCTACCTGACG GCGGCACAGCAAAAGGCCCGGGAGCGCTACAGCCAGATGGAATAG
Transcript	>Ophun1\|1911 ATGCACGACGACTATCCTTCACGATCGCCCAGCCGAGGGCGGGACCGTGATCTGGGCTTGTTCCGCGAAAGAGAC GACGAAGCAGGCCAGAGAGACGACGCCGACTTCAGAGACGACCGCTACCGATTGCGGCAGGACCCGCACGGCGAC CAGCAGGAAAGGTCTCTGCGCTATCCTCGCGGCGGAGGGGACCGCCTCACGGGCTACTATGATGACCGCCGTGAT GATCGCTACCGTGCTCGAGATGATGGATATTCCCACGCCTCTCGCCGCGATGTGGACTCACGCCGCTCGCAGTTT GATGATCGGGTTGGACGGGACTATCGAGGCTATCGAGGAGACGAGCGAGACTATCGATCCGAACGGGATTATCGC GACGAGCGGGACTATCGCGACGAGCGGGACCATCGTGCCGGGCGAGACTACCAGGCTCACCGGGACTACCACGAC ATGTACGATGATGGCCCTCGACGCGATCACGACCGTCGACGCGATAGGCCTCGCGAATCTCGTGACCAGGATGAG CCTCGGCATGAAGACAACGGCAGAAGCCGCCACCATCATGATGACCACGGACTGGGCCACCGTCAGAGGAGCCCG TCTCGCAACCGAATTCGCGATGCCGGAAGACCGACGGATACTGTCGTGTTGGAAGGTGTTCCTCGGAGCATCAAT GCATTGATTCTGCGAGAAGGTCTCCTCGCCTCGTCCGTCGCCATCAAATTCCCAACAATCGAGGTGCGAGTTGCC AAGCCACAAGAGGGCAGCTCAAGGGCCTTTGTACAGTTCAAAAATGTCGACGATGCGACCACTTTCGTCAAAGAG CATTTCCCGCATCTTGTCGTCTTTCTGATGCAATCCACTGATGACATACCAGATGGCAAGTTTCAAGTCTTCCTT CACTTCTCTCGCAACCCCGGGGCCGAGGGAGAAGCCTCGCAGGGTCCTGCTGGCTCCAGGTGGCGATGCGCGACG TGCGGAAAATACAACTCAAGGCGTACTAAATGCGAAAGATGCAATGCTGCGCAAGTTAGCGGAGGACCGACCGGG CGCACTGGGCCTGCTCAACTTGCCAGAGATGTCGATACCAAGGTGCAGATCCTATGCGTCTGGCCGTTGCCATCC CATATCGACGAGGACCAGCTGGCCGTGGAGATGAAGCGACTGGAACTCGTCAAAGAAGAGAAGCCCCAGGAAGAG ACGCACAAGCTCAAGTCGACGGCGCCTTCTGTGGACGGAGCCGGCTACGGGGCGCGGCCCGGGTCGCTGCATCGC GTTTTCATGGTGCGAGAGGTTGCAACCAACATCAAGATGACCTTTGGCTTTGCCGAGTTCTGGACGCTCAACGAC GCGTACGCGGCCTTGCGAAAACACCAGATGACGCGCTCCTTTCAGATTGCGGGCACACCGGTCACGGCTGGACTT ATTCACATCGGCGTCTTCGTCCAGGAGGATCGACCCATCACGCCGACCATTGATTTCATGTCATTTGTGCCCCTC TTCAATCCGTCACTGCGGGTGAGATATCGAGACCTGGACTTGTACGCCAGTCCCAAGCTCGTCACCTCAGAGGCC CCCCAATCTGAAGAGGAGACGGCCAAGACGAAGGCGAAGAAGCGCAAAGCGGACGAGCCCCTGTCCGAGTCGACG ACCAAAAAGCTCCCAGTCACGGCGGCCCCGGTCATGGCGGCGCAGATGGCCCTCTGGCAGCGCAGGCACGAGGAG ATTGCACAGGGTCCCGCGGCAGGCCATTTGCCTCCCGGGGCATCGGTCAAGTTCTCGATGCCTTTCTCGGGCCAG GCGGCCAAGCCGCAGCGTGTCAAGACGGAGCCTGCAGCTCCAGCCCCGGCCCCGGCGGCAGTGACCCCGGCGGAA GAGACACCCAGCGAGGTGTCGTACGTCGATCGCAGCCTGATGATTTGTTTTCTCTGTACAAAGAGATACAAATCG GTCGAGGAGCTCGACAAACATCAAGGGTCCCAGTACCATCGACGGCAGATGGGAAACAAGGACAAGGTGGCGGCG GCGCTGCCGATGGTGGCGGCCCGAGACAAGGCCCAAAAGGCCGAGCCGGCGCAGTACCGCGACCGGGCCAAGGAG CGACGGGAGGCTCACAACCAGCCCGACAAGCCGGACCCGAAGCCTCAGCCGGGACAGACCCAGGAAGCGCCCCGG GACGACAGCAAGAAGGCGGGCGAGTCAAAGGGCGCCGGCATGCTGGCCAAGATGGGGTGGTCGGCCGGGAGCGGA CTCGGCGCTCAGGGAGCGGGCCTGACGGAGGCCCTGACGGCGAGCGCCTACAAGGGCGGCGTGGGACTAGGTGCC GAGGGCGGCAAGCTGGGGGACGCGGCTGAGATTGCCGAGGGGAGGACGACTGATAGCTACGCCAGCTACCTGACG GCGGCACAGCAAAAGGCCCGGGAGCGCTACAGCCAGATGGAATAG
Gene	>Ophun1\|1911 ATGCACGACGACTATCCTTCACGATCGCCCAGCCGAGGGCGGGACCGTGATCTGGGCTTGTTCCGCGAAAGAGAC GACGAAGCAGGCCAGAGAGACGACGCCGACTTCAGAGACGACCGCTACCGATTGCGGCAGGGTAAAGACAGAGCC TGCGCCTTGAGTTGGGATTGACAGCACCTGAGGAGCCCGTTCCCGCCGAGCCTTGTCCTGAGCCATGAGAGCTGA CTTCCCAACGGGGCGACGGGACTACTCCCGGTCTCCGAGGCAAGACCCGCACGGCGACCAGCAGGAAAGGTCTCT GCGCTATCCTCGCGGCGGAGGGGACCGCCTCACGGGCTACTATGATGACCGCCGTGATGATCGCTACCGTGCTCG AGATGATGGATATTCCCACGCCTCTCGCCGCGATGTGGACTCACGCCGCTCGCAGTTTGATGATCGGGTTGGACG GGACTATCGAGGCTATCGAGGAGACGAGCGAGACTATCGATCCGAACGGGATTATCGCGACGAGCGGGACTATCG CGACGAGCGGGACCATCGTGCCGGGCGAGACTACCAGGCTCACCGGGACTACCACGACATGTACGATGATGGCCC TCGACGCGATCACGACCGTCGACGCGATAGGCCTCGCGAATCTCGTGACCAGGATGAGCCTCGGCATGAAGACAA CGGCAGAAGCCGCCACCATCATGATGACCACGGACTGGGCCACCGTCAGAGGAGCCCGTCTCGCAACCGAATTCG CGATGCCGGAAGACCGACGGATACTGTCGTGTTGGAAGGTGTTCCTCGGAGCATCAATGCATTGATTGTACGTCT TCTCCAAATACACAGCTTGGTCCGAAGCTCAGAGCTAACTGGTCGAATCTCTAGCTGCGAGAAGGTCTCCTCGCC TCGTCCGTCGCCATCAAATTCCCAACAATCGAGGTGCGAGTTGCCAAGCCACAAGGTGAGCATTACTCTTACCGC CCCCCCTCTCTTACTTGGCTGACTCGTCTCCAGAGGGCAGCTCAAGGGCCTTTGTACAGTTCAAAAATGTCGACG ATGCGACCACTTTCGTCAAAGAGCATTTCCCGCATCTTGTCGTCTTTCTGATGCAATCCACTGATGACATACCAG ATGGCAAGTTTCAAGTCTTCCTTCACTTCTCTCGCAACCCCGGGGCCGAGGGAGAAGCCTCGCAGGGTCCTGCTG GCTCCAGGTGGCGATGCGCGACGGTTCGTCTCAATCCAGCCCCCAACACATTGTTTGATGACTGACTGACCTTTG TCGCAGTGCGGAAAATACAACTCAAGGCGTACTAAATGCGAAAGATGCAATGCTGCGCAAGGTATATCGTCCACG GCTTCCAAGAGAGAGTTGAAGCAGACTAATGGTTTCCTCGTGCCCTACTCAGTTAGCGGAGGACCGACCGGGCGC ACTGGGCCTGCTCAACTTGCCAGAGATGTCGATACCAAGGTGCAGATCCTATGCGTCTGGCCGTTGCCATCCCAT ATCGACGAGGACCAGCTGGCCGTGGAGATGAAGCGACTGGAACTCGTCAAAGAAGAGAAGCCCCAGGAAGAGACG CACAAGCTCAAGTCGACGGCGCCTTCTGTGGACGGAGCCGGCTACGGGGCGCGGCCCGGGTCGCTGCATCGCGTT TTCATGGTGCGAGAGGTTGCAACCAACATCAAGATGACCTTTGGCTTTGCCGAGTTCTGGACGCTCAACGACGCG TACGCGGCCTTGCGAAAACACCAGATGACGCGCTCCTTTCAGATTGCGGGCACACCGGTCACGGCTGGACTTATT CACATCGGCGTCTTCGTCCAGGAGGATCGACCCATCACGCCGACCATTGATTTCATGTCATTTGTGCCCCTCTTC AATCCGTCACTGCGGGTGAGATATCGAGACCTGGACTTGTACGCCAGTCCCAAGCTCGTCACCTCAGAGGCCCCC CAATCTGAAGAGGAGACGGCCAAGACGAAGGCGAAGAAGCGCAAAGCGGACGAGCCCCTGTCCGAGTCGACGACC AAAAAGCTCCCAGTCACGGCGGCCCCGGTCATGGCGGCGCAGATGGCCCTCTGGCAGCGCAGGCACGAGGAGATT GCACAGGGTCCCGCGGCAGGCCATTTGCCTCCCGGGGCATCGGTCAAGTTCTCGATGCCTTTCTCGGGCCAGGCG GCCAAGCCGCAGCGTGTCAAGACGGAGCCTGCAGCTCCAGCCCCGGCCCCGGCGGCAGTGACCCCGGCGGAAGAG ACACCCAGCGAGGTGTCGTACGTCGATCGCAGCCTGATGATTTGTTTTCTCTGTACAAAGAGATACAAATCGGTC GAGGAGCTCGACAAACATCAAGGGTCCCAGTACCATCGACGGCAGATGGGAAACAAGGACAAGGTGGCGGCGGCG CTGCCGATGGTGGCGGCCCGAGACAAGGCCCAAAAGGCCGAGCCGGCGCAGTACCGCGACCGGGCCAAGGAGCGA CGGGAGGCTCACAACCAGCCCGACAAGCCGGACCCGAAGCCTCAGCCGGGACAGACCCAGGAAGCGCCCCGGGAC GACAGCAAGAAGGCGGGCGAGTCAAAGGGCGCCGGCATGCTGGCCAAGATGGGGTGGTCGGCCGGGAGCGGACTC GGCGCTCAGGGAGCGGGCCTGACGGAGGCCCTGACGGCGAGCGCCTACAAGGGCGGCGTGGGACTAGGTGCCGAG GGCGGCAAGCTGGGGGACGCGGCTGAGATTGCCGAGGGGAGGACGACTGATAGCTACGCCAGCTACCTGACGGCG GCACAGCAAAAGGCCCGGGAGCGCTACAGCCAGATGGAATAG

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