Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1838
Gene name
LocationContig_1806:1089..1391
Strand-
Gene length (bp)302
Transcript length (bp)264
Coding sequence length (bp)264
Protein length (aa) 88

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup854
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6674
Ophiocordyceps australis map64 (Brazil) OphauB2|4345
Ophiocordyceps camponoti-floridani Ophcf2|00309
Ophiocordyceps camponoti-rufipedis Ophun1|1838 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2514
Ophiocordyceps kimflemingae Ophio5|1373
Ophiocordyceps subramaniannii Hirsu2|4665

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1838
MPAQRPRRPPPMPPPAAPLRRPRSPRAPAAQPAPPPRPSDRHLPSRTASSSRTAQSTTTRVPGTSGVGRNAVPWI
LSGVMAVVALIN*
Coding >Ophun1|1838
ATGCCAGCTCAACGGCCACGACGGCCTCCCCCGATGCCACCACCAGCGGCTCCTCTTCGTCGACCACGCTCACCT
CGGGCACCCGCGGCGCAACCCGCACCACCACCTCGTCCATCTGACAGACATCTCCCCTCCCGTACAGCCTCGTCC
AGCCGCACCGCCCAGTCGACCACCACTCGCGTCCCCGGCACCTCGGGCGTCGGCCGCAACGCCGTCCCCTGGATC
CTTTCGGGCGTCATGGCCGTCGTGGCTCTCATCAACTAG
Transcript >Ophun1|1838
ATGCCAGCTCAACGGCCACGACGGCCTCCCCCGATGCCACCACCAGCGGCTCCTCTTCGTCGACCACGCTCACCT
CGGGCACCCGCGGCGCAACCCGCACCACCACCTCGTCCATCTGACAGACATCTCCCCTCCCGTACAGCCTCGTCC
AGCCGCACCGCCCAGTCGACCACCACTCGCGTCCCCGGCACCTCGGGCGTCGGCCGCAACGCCGTCCCCTGGATC
CTTTCGGGCGTCATGGCCGTCGTGGCTCTCATCAACTAG
Gene >Ophun1|1838
ATGCCAGCTCAACGGCCACGACGGCCTCCCCCGATGCCACCACCAGCGGCTCCTCTTCGTCGACCACGCTCACCT
CGGGCACCCGCGGCGCAACCCGCACCACCACCTCGTGTAAGTCACTGCATCCAACCCGCCTCTCTCGTCTACAGC
CATCTGACAGACATCTCCCCTCCCGTACAGCCTCGTCCAGCCGCACCGCCCAGTCGACCACCACTCGCGTCCCCG
GCACCTCGGGCGTCGGCCGCAACGCCGTCCCCTGGATCCTTTCGGGCGTCATGGCCGTCGTGGCTCTCATCAACT
AG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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