Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1834
Gene name
LocationContig_180:23447..24614
Strand-
Gene length (bp)1167
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01040 UbiA UbiA prenyltransferase family 5.2E-17 85 236

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Yes
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1834
MNRKHILQARYHAYSIWLFTRSDIKDIILPSLLYSLVTLPSLSPIFGIITPPLSLVQRLPLALFWTWINLLPITI
DNQRQPDSITEDAINKPWRTLPSQRMTPRNATTLMICLYPLALLSSLFTGGFQQSLSLTVLSFWYNNLRGAQDNL
ITRQVLNAAGFNCFATGALTVLVGRAGPLTTGPFLTWQLMLIAVVATTVQTQDMYDQKGDAERGRHTVPLDLGDG
FARWTVAVAMSTPTYVYMNT*
Coding >Ophun1|1834
ATGAATCGAAAACACATCCTTCAAGCCCGCTATCACGCCTACTCCATCTGGCTCTTCACCCGCAGTGACATCAAG
GACATCATCCTCCCCAGCCTCCTCTACTCCCTCGTCACCCTACCCTCCCTCTCCCCCATCTTCGGCATCATAACA
CCTCCCCTATCCCTGGTCCAAAGACTCCCCCTCGCCCTCTTCTGGACATGGATCAACCTCCTACCCATCACCATC
GACAACCAACGCCAGCCCGACTCCATAACTGAAGACGCCATCAACAAGCCATGGCGTACGCTCCCCTCACAACGC
ATGACTCCTCGCAATGCCACCACCCTCATGATCTGCCTCTATCCCCTCGCCCTTCTCTCCAGCCTCTTCACCGGC
GGCTTCCAACAAAGCCTCTCCCTCACTGTCCTCAGCTTCTGGTACAACAACCTCCGAGGTGCCCAGGACAACTTG
ATAACGCGTCAGGTCCTCAACGCCGCGGGCTTCAACTGCTTCGCCACCGGCGCCCTCACCGTCCTCGTCGGCAGA
GCAGGCCCGCTGACAACCGGGCCCTTTCTCACCTGGCAGTTGATGCTGATAGCCGTGGTAGCGACAACAGTGCAG
ACGCAGGACATGTACGATCAGAAGGGGGACGCTGAGCGCGGCCGCCACACGGTTCCCTTGGATCTGGGCGATGGC
TTCGCTCGCTGGACTGTTGCTGTGGCCATGTCAACGCCAACGTACGTATACATGAACACATGA
Transcript >Ophun1|1834
ATGAATCGAAAACACATCCTTCAAGCCCGCTATCACGCCTACTCCATCTGGCTCTTCACCCGCAGTGACATCAAG
GACATCATCCTCCCCAGCCTCCTCTACTCCCTCGTCACCCTACCCTCCCTCTCCCCCATCTTCGGCATCATAACA
CCTCCCCTATCCCTGGTCCAAAGACTCCCCCTCGCCCTCTTCTGGACATGGATCAACCTCCTACCCATCACCATC
GACAACCAACGCCAGCCCGACTCCATAACTGAAGACGCCATCAACAAGCCATGGCGTACGCTCCCCTCACAACGC
ATGACTCCTCGCAATGCCACCACCCTCATGATCTGCCTCTATCCCCTCGCCCTTCTCTCCAGCCTCTTCACCGGC
GGCTTCCAACAAAGCCTCTCCCTCACTGTCCTCAGCTTCTGGTACAACAACCTCCGAGGTGCCCAGGACAACTTG
ATAACGCGTCAGGTCCTCAACGCCGCGGGCTTCAACTGCTTCGCCACCGGCGCCCTCACCGTCCTCGTCGGCAGA
GCAGGCCCGCTGACAACCGGGCCCTTTCTCACCTGGCAGTTGATGCTGATAGCCGTGGTAGCGACAACAGTGCAG
ACGCAGGACATGTACGATCAGAAGGGGGACGCTGAGCGCGGCCGCCACACGGTTCCCTTGGATCTGGGCGATGGC
TTCGCTCGCTGGACTGTTGCTGTGGCCATGTCAACGCCAACGTACGTATACATGAACACATGA
Gene >Ophun1|1834
ATGAATCGAAAACACATCCTTCAAGCCCGCTATCACGCCTACTCCATCTGGCTCTTCACCCGCAGTGACATCAAG
GACATCATCCTCCCCAGCCTCCTCTACTCCCTCGTCACCCTACCCTCCCTCTCCCCCATCTTCGGCATCATAACA
CCTCCCCTATCCCTGGTCCAAAGACTCCCCCTCGCCCTCTTCTGGACATGGATCAACCTCCTACCCATCACCATC
GACAACCAACGCCAGCCCGACTCCATAACTGAAGACGCCATCAACAAGCCATGGCGTACGCTCCCCTCACAACGC
ATGACTCCTCGCAATGCCACCACCCTCATGATCTGCCTCTATCCCCTCGCCCTTCTCTCCAGCCTCTTCACCGGC
GGCTTCCAACAAAGCCTCTCCCTCACTGTCCTCAGCTTCTGGTACAACAACCTCCGAGGTGCCCAGGACAACTTG
ATAACGCGTCAGGTCCTCAACGCCGCGGGCTTCAACTGCTTCGCCACCGGCGCCCTCACCGTCCTCGTCGGCAGA
GCAGGCCCGCTGACAACCGGGCCCTTTCTCACCTGGCAGTTGATGCTGATAGCCGTGGTAGCGACAACAGTGCAG
ACGCAGGACATGTACGATCAGAAGGGGGACGCTGAGCGCGGCCGCCACACGGTTCCCTTGGATCTGGGCGATGGC
TTCGCTCGCTGGACTGTTGCTGTGGGTGTTGTCTTTTGGTCTGTGCTTTGTCCCGTCTTTGTTGGGGGGCATGTG
CTGGGCTTCGTCTTGACGGACTGCTTGGGCTTTGTTGTTGCCTTTCGCTGCCTTTTGTTGAGGAGTGTGGCGGCT
GATAAGAGGAGCTATATTGTTTGGAACGTGTGGTTGGTTTCTGTGTATTCGCTGCCTCTGCTTGCGGCCGTCTCA
GAGGGAAGTATATGAGTCTTGGATATGTTCCGTTATGACATGGAGGGAGTGCGATTTTGTTGATGGTATAGAACA
GAGGAGAGTTCTGCAAGGAACAGCTGTTACAACGCCTGTATTAGTTCATGTCGTGTTGGTTGTGTAGTGATTGAT
CATGAATTCCATTGGCTTTCAATAAGACGAAGCTTGGTGTTATTATCATCATCTCAGCGGCTGAATCTAACACAG
TCAGCCATGTCAACGCCAACGTACGTATACATGAACACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail