© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1832 |
| Gene name | |
| Location | Contig_180:20784..21535 |
| Strand | - |
| Gene length (bp) | 751 |
| Transcript length (bp) | 573 |
| Coding sequence length (bp) | 573 |
| Protein length (aa) | 191 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08432 | Vfa1 | AAA-ATPase Vps4-associated protein 1 | 1.7E-55 | 7 | 185 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C0V9|YNH1_SCHPO | UPF0589 protein C32H8.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC32H8.01c PE=3 SV=1 | 1 | 69 | 1.0E-14 |
| sp|P40080|VFA1_YEAST | VPS4-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VFA1 PE=1 SV=1 | 7 | 184 | 1.0E-09 |
| Orthofinder run ID | 4 |
| Orthogroup | 3679 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1832 MSAPFPNLYSHRKVAESSAKACDICYKPTTSVLITPGNKDFFYVCPAHLKDKYFCTPKVDEDAIKAKREKAVAEE MERLKKEYEEQQRKKKEKESKDKEKNKDKEKGKGQEEQDKEKGEAKEDKNQDKDKKQETEATDTLGEEPRIFELK SAFYQQRLQKKRQAEMAKRDRERASQPNYFPSVPTDLPGK* |
| Coding | >Ophun1|1832 ATGTCAGCGCCTTTCCCGAACCTGTACTCGCATCGTAAGGTTGCTGAGTCGTCAGCCAAGGCGTGCGACATCTGC TACAAGCCCACCACTTCCGTGCTCATCACGCCAGGGAACAAGGACTTCTTCTATGTCTGCCCAGCCCACCTGAAG GACAAGTACTTTTGCACGCCCAAGGTCGACGAGGATGCCATCAAGGCCAAGAGGGAAAAGGCGGTGGCGGAGGAG ATGGAGCGGCTGAAGAAGGAATACGAGGAGCAGCAGCGGAAGAAGAAGGAAAAGGAGTCTAAGGATAAGGAAAAG AACAAGGACAAGGAAAAGGGAAAGGGACAAGAAGAACAGGATAAGGAAAAGGGAGAGGCAAAAGAAGACAAGAAT CAAGACAAGGACAAGAAGCAGGAAACAGAGGCTACAGACACGCTGGGGGAGGAGCCCCGGATCTTCGAGCTCAAG AGTGCCTTCTACCAGCAGCGGCTACAGAAGAAGCGACAGGCCGAGATGGCGAAGCGAGATCGCGAGCGGGCGTCT CAGCCCAACTACTTTCCTTCCGTTCCCACCGATCTGCCCGGGAAGTGA |
| Transcript | >Ophun1|1832 ATGTCAGCGCCTTTCCCGAACCTGTACTCGCATCGTAAGGTTGCTGAGTCGTCAGCCAAGGCGTGCGACATCTGC TACAAGCCCACCACTTCCGTGCTCATCACGCCAGGGAACAAGGACTTCTTCTATGTCTGCCCAGCCCACCTGAAG GACAAGTACTTTTGCACGCCCAAGGTCGACGAGGATGCCATCAAGGCCAAGAGGGAAAAGGCGGTGGCGGAGGAG ATGGAGCGGCTGAAGAAGGAATACGAGGAGCAGCAGCGGAAGAAGAAGGAAAAGGAGTCTAAGGATAAGGAAAAG AACAAGGACAAGGAAAAGGGAAAGGGACAAGAAGAACAGGATAAGGAAAAGGGAGAGGCAAAAGAAGACAAGAAT CAAGACAAGGACAAGAAGCAGGAAACAGAGGCTACAGACACGCTGGGGGAGGAGCCCCGGATCTTCGAGCTCAAG AGTGCCTTCTACCAGCAGCGGCTACAGAAGAAGCGACAGGCCGAGATGGCGAAGCGAGATCGCGAGCGGGCGTCT CAGCCCAACTACTTTCCTTCCGTTCCCACCGATCTGCCCGGGAAGTGA |
| Gene | >Ophun1|1832 ATGTCAGCGCCTTTCCCGAACCTGTACTCGCATCGTAAGGTTGCTGAGTCGTCAGCCAAGGCGTGCGACATCTGC TACAAGCCCACCACTTCCGTGCTCATCACGCCAGGGAACAAGGTGAGCGAAGCTGGGAAGGGAACCTGGGCTTCA GCCTTGAGGCACTGACTGACACGCTATATAGGACTTCTTCTATGTCTGCCCAGCCCACCTGAAGGACAAGTACTT TTGCACGCCCAAGGTCGACGAGGATGCCATCAAGGCCAAGAGGGAAAAGGCGGTGGCGGAGGAGATGGAGCGGCT GAAGAAGGAATACGAGGAGCAGCAGCGGAAGAAGAAGGAAAAGGAGTCTAAGGATAAGGAAAAGAACAAGGACAA GGAAAAGGGAAAGGGACAAGAAGAACAGGATAAGGAAAAGGGAGAGGCAAAAGAAGACAAGAATCAAGACAAGGA CAAGAAGCAGGAAACAGAGGTAGCACAGATCCCTCGACGTCCCCTCGGAAACCAACACTGAGGCACAACGCAGGC TACAGACACGCTGGGGGAGGAGCCCCGGATCTTCGAGCTCAAGAGGTAACCACAAAACACCAAGGCTCCTCTCGC CATCCTCGGCTGACGAGTGATGGCAAGCAGTGCCTTCTACCAGCAGCGGCTACAGAAGAAGCGACAGGCCGAGAT GGCGAAGCGAGATCGCGAGCGGGCGTCTCAGCCCAACTACTTTCCTTCCGTTCCCACCGATCTGCCCGGGAAGTG A |