Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|1829
Gene name
Location	Contig_180:15828..16828
Strand	+
Gene length (bp)	1000
Transcript length (bp)	879
Coding sequence length (bp)	879
Protein length (aa)	293

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	123	145	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|1829 MAAPTAILSTFGNKTALCFNVTCQCQPNNLERIKDKSRDCMDQCGLPVTTKEFHDKVDNGCSSALKGIHPTGILG WGEPLPHAANHVGAPNGSTVTGSTDSNLPSAESSTFSHVHDSPVNATAGIVAIVFFVLATIIIGATLFLLRHRVA NLGFFHRWRRNGDEAAAAAVVVEKRTSLSVSTSVVELSPDRDSPVRELDVVSRIPLRALPGYDAYSLQQYPNALR INPDAIAELPGSSTFAQELQSRISFSFEMPSPTRLFPDNKFPFDDESETEDVSSPEESCPPYTESAV*
Coding	>Ophun1\|1829 ATGGCTGCTCCTACGGCCATTCTGTCGACGTTCGGCAACAAAACAGCCCTCTGTTTCAACGTCACCTGCCAATGC CAGCCCAACAACCTTGAAAGGATCAAAGACAAGTCTCGGGATTGTATGGACCAGTGCGGACTGCCCGTTACTACC AAAGAGTTCCATGATAAAGTCGACAACGGCTGCTCGTCTGCCCTCAAAGGCATTCATCCAACCGGCATCCTGGGA TGGGGCGAACCTCTACCTCATGCTGCAAACCATGTAGGAGCACCAAACGGATCGACAGTTACTGGGTCAACGGAC TCGAATCTGCCTTCAGCCGAATCCTCGACGTTTAGTCATGTTCACGATTCACCAGTCAACGCGACGGCAGGCATC GTTGCTATCGTCTTCTTTGTTCTGGCAACCATCATCATAGGTGCCACTCTCTTCTTGCTGCGCCATCGAGTCGCC AATCTCGGCTTCTTCCACAGATGGCGGAGGAATGGCGACGAGGCTGCTGCTGCTGCTGTTGTCGTCGAGAAAAGG ACGTCGCTCTCCGTGTCTACCAGCGTGGTTGAACTATCCCCGGATCGTGACTCGCCCGTCAGGGAGTTGGACGTC GTGAGTCGGATCCCTCTGCGGGCTTTACCAGGGTATGATGCTTACTCGCTGCAGCAGTACCCCAATGCCCTTCGA ATCAACCCAGACGCCATAGCCGAGTTGCCCGGAAGCTCAACTTTTGCGCAAGAGTTGCAGTCACGCATCTCCTTT TCGTTCGAGATGCCCAGTCCGACCAGGTTGTTCCCAGACAACAAGTTTCCCTTTGATGATGAGTCGGAAACAGAA GACGTTTCTTCCCCAGAGGAGTCATGCCCGCCGTATACCGAATCTGCGGTCTAG
Transcript	>Ophun1\|1829 ATGGCTGCTCCTACGGCCATTCTGTCGACGTTCGGCAACAAAACAGCCCTCTGTTTCAACGTCACCTGCCAATGC CAGCCCAACAACCTTGAAAGGATCAAAGACAAGTCTCGGGATTGTATGGACCAGTGCGGACTGCCCGTTACTACC AAAGAGTTCCATGATAAAGTCGACAACGGCTGCTCGTCTGCCCTCAAAGGCATTCATCCAACCGGCATCCTGGGA TGGGGCGAACCTCTACCTCATGCTGCAAACCATGTAGGAGCACCAAACGGATCGACAGTTACTGGGTCAACGGAC TCGAATCTGCCTTCAGCCGAATCCTCGACGTTTAGTCATGTTCACGATTCACCAGTCAACGCGACGGCAGGCATC GTTGCTATCGTCTTCTTTGTTCTGGCAACCATCATCATAGGTGCCACTCTCTTCTTGCTGCGCCATCGAGTCGCC AATCTCGGCTTCTTCCACAGATGGCGGAGGAATGGCGACGAGGCTGCTGCTGCTGCTGTTGTCGTCGAGAAAAGG ACGTCGCTCTCCGTGTCTACCAGCGTGGTTGAACTATCCCCGGATCGTGACTCGCCCGTCAGGGAGTTGGACGTC GTGAGTCGGATCCCTCTGCGGGCTTTACCAGGGTATGATGCTTACTCGCTGCAGCAGTACCCCAATGCCCTTCGA ATCAACCCAGACGCCATAGCCGAGTTGCCCGGAAGCTCAACTTTTGCGCAAGAGTTGCAGTCACGCATCTCCTTT TCGTTCGAGATGCCCAGTCCGACCAGGTTGTTCCCAGACAACAAGTTTCCCTTTGATGATGAGTCGGAAACAGAA GACGTTTCTTCCCCAGAGGAGTCATGCCCGCCGTATACCGAATCTGCGGTCTAG
Gene	>Ophun1\|1829 ATGGCTGCTCCTACGGCCATTCTGTCGACGTTCGGCAACAAAACAGCCCTCTGGTCGGTTCATTGTCGACGGCAT TGCATGCACACAGCTACAGCCAAGTTTACAGAATGTACGAGTTTCAACGTCACCTGCCAATGCCAGCCCAACAAC CTTGAAAGGATCAAAGACAAGTCTCGGGATTGTATGGACCAGTGCGGACTGCCCGTTACTACCAAAGGTACATAA CATGCTCCTCCTTTCAACGCGGCCCTGTCACTCATATGCTTCGCCTGCAGAGTTCCATGATAAAGTCGACAACGG CTGCTCGTCTGCCCTCAAAGGCATTCATCCAACCGGCATCCTGGGATGGGGCGAACCTCTACCTCATGCTGCAAA CCATGTAGGAGCACCAAACGGATCGACAGTTACTGGGTCAACGGACTCGAATCTGCCTTCAGCCGAATCCTCGAC GTTTAGTCATGTTCACGATTCACCAGTCAACGCGACGGCAGGCATCGTTGCTATCGTCTTCTTTGTTCTGGCAAC CATCATCATAGGTGCCACTCTCTTCTTGCTGCGCCATCGAGTCGCCAATCTCGGCTTCTTCCACAGATGGCGGAG GAATGGCGACGAGGCTGCTGCTGCTGCTGTTGTCGTCGAGAAAAGGACGTCGCTCTCCGTGTCTACCAGCGTGGT TGAACTATCCCCGGATCGTGACTCGCCCGTCAGGGAGTTGGACGTCGTGAGTCGGATCCCTCTGCGGGCTTTACC AGGGTATGATGCTTACTCGCTGCAGCAGTACCCCAATGCCCTTCGAATCAACCCAGACGCCATAGCCGAGTTGCC CGGAAGCTCAACTTTTGCGCAAGAGTTGCAGTCACGCATCTCCTTTTCGTTCGAGATGCCCAGTCCGACCAGGTT GTTCCCAGACAACAAGTTTCCCTTTGATGATGAGTCGGAAACAGAAGACGTTTCTTCCCCAGAGGAGTCATGCCC GCCGTATACCGAATCTGCGGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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