Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1812
Gene name
LocationContig_18:27802..28635
Strand+
Gene length (bp)833
Transcript length (bp)432
Coding sequence length (bp)432
Protein length (aa) 144

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q00371|CAP22_COLGL Protein CAP22 OS=Colletotrichum gloeosporioides GN=CAP22 PE=2 SV=1 21 119 2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1812
MELRHRKLAFALTATLLVGAQARIELDMKDVPDVCSSMCRPVVNLTSACDTKLPDATDADEKLLEAQCVCTNKSF
NVSRVAGLCAGCLTQDLAKATGEEKTKLKAPVRDINEILSACSFAAESSLRKFPTLRRVLQLKGILSA*
Coding >Ophun1|1812
ATGGAGCTACGCCACCGAAAGCTGGCTTTCGCTCTCACGGCGACGCTTCTCGTCGGCGCGCAGGCTCGCATTGAG
CTGGACATGAAGGACGTCCCCGACGTGTGCAGCAGCATGTGCAGGCCCGTCGTAAACCTGACGAGCGCGTGCGAC
ACGAAGCTACCAGACGCGACGGACGCGGACGAGAAGCTTCTCGAGGCGCAGTGCGTCTGCACGAATAAGAGCTTC
AACGTCTCGCGCGTGGCAGGACTCTGCGCCGGCTGTCTGACGCAGGATTTGGCCAAGGCGACGGGCGAGGAGAAG
ACTAAGTTGAAGGCTCCGGTTCGGGATATCAATGAGATTCTCTCGGCTTGCAGCTTTGCCGCTGAATCCTCCCTA
CGCAAGTTTCCCACTTTGCGTCGTGTTCTACAGCTCAAGGGAATTCTCAGCGCCTAA
Transcript >Ophun1|1812
ATGGAGCTACGCCACCGAAAGCTGGCTTTCGCTCTCACGGCGACGCTTCTCGTCGGCGCGCAGGCTCGCATTGAG
CTGGACATGAAGGACGTCCCCGACGTGTGCAGCAGCATGTGCAGGCCCGTCGTAAACCTGACGAGCGCGTGCGAC
ACGAAGCTACCAGACGCGACGGACGCGGACGAGAAGCTTCTCGAGGCGCAGTGCGTCTGCACGAATAAGAGCTTC
AACGTCTCGCGCGTGGCAGGACTCTGCGCCGGCTGTCTGACGCAGGATTTGGCCAAGGCGACGGGCGAGGAGAAG
ACTAAGTTGAAGGCTCCGGTTCGGGATATCAATGAGATTCTCTCGGCTTGCAGCTTTGCCGCTGAATCCTCCCTA
CGCAAGTTTCCCACTTTGCGTCGTGTTCTACAGCTCAAGGGAATTCTCAGCGCCTAA
Gene >Ophun1|1812
ATGGAGCTACGCCACCGAAAGCTGGCTTTCGCTCTCACGGCGACGCTTCTCGTCGGCGCGCAGGCTCGCATTGAG
CTGGACATGAAGGACGTCCCCGACGTGTGCAGCAGCATGTGCAGGCCCGTCGTAAACCTGACGAGCGCGTGCGAC
ACGAAGCTACCAGACGCGACGGACGCGGACGAGAAGCTTCTCGAGGCGCAGTGCGTCTGCACGAATAAGAGCTTC
AACGTCTCGCGCGTGGCAGGACTCTGCGCCGGCTGTCTGACGCAGGATTTGGCCAAGGCGACGGGCGAGGAGAAG
ACTAAGTTGAAGGCTCCGGTTCGGGGTGAGACGTCCTTTCTTTTTCTTTCCAAGTCTGTGATGGTGGGATCGACG
TGCTGATCTTTGACGGGGGGATGGGGGGACCGCAGATATCAATGAGATTCTCTCGGCTTGCAGCTTTGCCGCTGA
ATCGTACGCGTCGACGGCGACAAAGGCTGCTGAGACGGTGACGGTGGAGGCTACGGCGGCGACGGATGTTGGGCA
GTTGACGACGACGATTTCGCGGGCTATGCTGTTGCCGACGGAGGAGGTGGCGAGGAGTGGAGGGGGAGCGATTGG
GGGAGGGGGGTTGAAGGGTGTTGGGTGGGTTGTTGTGGTGGTGGTTTGGGTGGTGGTTTGGTAGAGGGGGTGCTG
ATGTTTTGGTTGTCATGTTGTGTTCTGTGTAGGTCTGTCTATACCGATCTCATCTTCTTCATTGCACTTTAGGAA
AACAGTTCTAATGCGGCAGCTCCCTACGCAAGTTTCCCACTTTGCGTCGTGTTCTACAGCTCAAGGGAATTCTCA
GCGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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