Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1754
Gene name
LocationContig_177:10705..12547
Strand+
Gene length (bp)1842
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03547 Mem_trans Membrane transport protein 4.9E-54 47 551

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 39 210 2.0E-50
sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 47 286 7.0E-48
sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 388 564 2.0E-36
sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 330 562 3.0E-35

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0006810 transport No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 43 65 22
2 78 97 19
3 107 129 22
4 382 404 22
5 424 446 22
6 467 489 22
7 502 524 22
8 537 559 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1754
MDSANSFAGPVSYRLAHVVQNAYEYPMAVLQGQPSDHPSLPHLCLLVFEAVLEVVCVSLPGYIIARLGHFDADKQ
KFLANLNVMLFTPCLIFTKLASQLNAEKLTELAIIPAIFVLQTLISWIVSTLLSKAFRFNRRASNFVTAMGVFGN
SNSLPISLVLSLSQTIKGLHWDRIAGDNDDEVAARGILYLLIFQQLGQLVRWSWGYHVLLAPKDKYPEYQQQIAE
EGSARYEAHNEQETRGLIDGLDDPETEDDERQSVDSRTYVPDGQTPLAGTSRTSAESSDDEFAPKKPQRPDSTPR
NDVVPGSAPETLAFPRVGGSAFRSQPPRPDGVWASFKASAAERSRSLQGRTSRYLNDVCERIPEPVRVPMSVLVK
ASKKMAYLVWEFMNPPLWAMLIAITVASIPALQKLFFEEGTFINNSVTSAVKSSGGVAVPLILVVLGANLARNTM
ARDDNHDAEEEQLGTKLLVASLLSRMVLPTVIMAPILALMAKYLPVSILDDPIFIVVCFLLTGAPSALQLAQICQ
INGVYEKTMGRVLFQSYVIWILPSTLLLTVMALEVVKLAAV*
Coding >Ophun1|1754
ATGGACTCTGCCAACTCGTTCGCCGGGCCCGTCTCCTACCGTCTGGCCCATGTCGTCCAAAATGCCTACGAGTAC
CCCATGGCCGTCCTCCAAGGACAGCCGTCAGACCACCCTTCGCTCCCTCATCTGTGTCTCCTCGTCTTTGAGGCC
GTCCTCGAGGTCGTCTGCGTCAGTCTTCCGGGCTACATCATCGCCCGCCTCGGCCACTTTGATGCCGACAAGCAA
AAATTCCTGGCAAACCTCAACGTCATGCTGTTTACCCCATGCCTGATCTTTACGAAGCTGGCCTCGCAGCTCAAC
GCCGAAAAGCTGACCGAACTCGCCATCATCCCCGCCATCTTTGTCCTGCAAACATTGATATCGTGGATCGTCTCC
ACTCTCCTTTCCAAGGCGTTCCGATTCAATCGACGAGCCTCCAACTTTGTCACCGCCATGGGTGTCTTTGGCAAC
TCCAACTCGCTGCCCATTTCTCTCGTCCTCTCCCTTTCGCAGACCATCAAGGGCCTGCACTGGGACCGCATCGCT
GGGGACAACGACGACGAGGTCGCCGCCCGAGGCATCCTCTATCTTCTCATATTTCAACAACTCGGCCAACTGGTC
AGATGGAGCTGGGGATATCACGTGCTGCTCGCCCCCAAGGACAAGTATCCCGAATACCAGCAGCAGATTGCCGAG
GAGGGCTCTGCCCGCTACGAGGCTCACAACGAGCAAGAGACCCGGGGGCTCATTGACGGCCTCGACGACCCAGAG
ACGGAAGACGACGAGCGCCAAAGCGTCGACTCTCGCACCTACGTGCCCGACGGCCAGACTCCGCTCGCCGGCACC
TCGAGGACCTCTGCCGAATCGAGCGACGACGAGTTTGCGCCAAAGAAGCCGCAGCGTCCCGACTCGACCCCGCGC
AACGACGTCGTTCCCGGGAGTGCACCCGAAACCCTGGCGTTTCCGCGAGTCGGTGGCAGCGCTTTCCGCAGTCAA
CCCCCCAGGCCCGATGGAGTCTGGGCTTCGTTCAAGGCATCGGCCGCCGAGAGGTCTCGATCTCTACAGGGCAGG
ACGAGCCGCTACCTAAACGACGTGTGCGAGAGAATACCGGAACCGGTGCGCGTCCCCATGTCCGTCTTGGTCAAG
GCCTCGAAGAAGATGGCGTACCTCGTTTGGGAGTTTATGAACCCGCCGCTGTGGGCGATGCTCATTGCCATAACC
GTGGCATCGATCCCCGCCCTTCAAAAGCTCTTTTTCGAAGAGGGGACCTTTATCAATAACAGTGTAACGAGCGCC
GTCAAGTCGAGCGGTGGCGTTGCCGTCCCTTTGATCCTGGTCGTCTTGGGCGCAAACCTGGCTAGAAACACAATG
GCACGCGACGACAACCACGATGCCGAGGAGGAGCAGCTCGGCACCAAGCTGCTGGTGGCGTCTTTGCTGAGCCGC
ATGGTCTTGCCGACTGTCATTATGGCCCCGATTTTGGCTCTGATGGCAAAGTATCTGCCCGTCAGCATTCTCGAC
GATCCCATCTTCATTGTCGTCTGCTTCCTACTCACCGGTGCCCCGAGCGCGCTGCAACTGGCACAGATATGCCAG
ATTAATGGGGTGTACGAGAAGACGATGGGCCGTGTGCTCTTTCAGAGCTACGTAATATGGATTCTCCCGTCTACG
CTATTACTCACAGTCATGGCACTGGAGGTTGTCAAGTTGGCAGCTGTGTGA
Transcript >Ophun1|1754
ATGGACTCTGCCAACTCGTTCGCCGGGCCCGTCTCCTACCGTCTGGCCCATGTCGTCCAAAATGCCTACGAGTAC
CCCATGGCCGTCCTCCAAGGACAGCCGTCAGACCACCCTTCGCTCCCTCATCTGTGTCTCCTCGTCTTTGAGGCC
GTCCTCGAGGTCGTCTGCGTCAGTCTTCCGGGCTACATCATCGCCCGCCTCGGCCACTTTGATGCCGACAAGCAA
AAATTCCTGGCAAACCTCAACGTCATGCTGTTTACCCCATGCCTGATCTTTACGAAGCTGGCCTCGCAGCTCAAC
GCCGAAAAGCTGACCGAACTCGCCATCATCCCCGCCATCTTTGTCCTGCAAACATTGATATCGTGGATCGTCTCC
ACTCTCCTTTCCAAGGCGTTCCGATTCAATCGACGAGCCTCCAACTTTGTCACCGCCATGGGTGTCTTTGGCAAC
TCCAACTCGCTGCCCATTTCTCTCGTCCTCTCCCTTTCGCAGACCATCAAGGGCCTGCACTGGGACCGCATCGCT
GGGGACAACGACGACGAGGTCGCCGCCCGAGGCATCCTCTATCTTCTCATATTTCAACAACTCGGCCAACTGGTC
AGATGGAGCTGGGGATATCACGTGCTGCTCGCCCCCAAGGACAAGTATCCCGAATACCAGCAGCAGATTGCCGAG
GAGGGCTCTGCCCGCTACGAGGCTCACAACGAGCAAGAGACCCGGGGGCTCATTGACGGCCTCGACGACCCAGAG
ACGGAAGACGACGAGCGCCAAAGCGTCGACTCTCGCACCTACGTGCCCGACGGCCAGACTCCGCTCGCCGGCACC
TCGAGGACCTCTGCCGAATCGAGCGACGACGAGTTTGCGCCAAAGAAGCCGCAGCGTCCCGACTCGACCCCGCGC
AACGACGTCGTTCCCGGGAGTGCACCCGAAACCCTGGCGTTTCCGCGAGTCGGTGGCAGCGCTTTCCGCAGTCAA
CCCCCCAGGCCCGATGGAGTCTGGGCTTCGTTCAAGGCATCGGCCGCCGAGAGGTCTCGATCTCTACAGGGCAGG
ACGAGCCGCTACCTAAACGACGTGTGCGAGAGAATACCGGAACCGGTGCGCGTCCCCATGTCCGTCTTGGTCAAG
GCCTCGAAGAAGATGGCGTACCTCGTTTGGGAGTTTATGAACCCGCCGCTGTGGGCGATGCTCATTGCCATAACC
GTGGCATCGATCCCCGCCCTTCAAAAGCTCTTTTTCGAAGAGGGGACCTTTATCAATAACAGTGTAACGAGCGCC
GTCAAGTCGAGCGGTGGCGTTGCCGTCCCTTTGATCCTGGTCGTCTTGGGCGCAAACCTGGCTAGAAACACAATG
GCACGCGACGACAACCACGATGCCGAGGAGGAGCAGCTCGGCACCAAGCTGCTGGTGGCGTCTTTGCTGAGCCGC
ATGGTCTTGCCGACTGTCATTATGGCCCCGATTTTGGCTCTGATGGCAAAGTATCTGCCCGTCAGCATTCTCGAC
GATCCCATCTTCATTGTCGTCTGCTTCCTACTCACCGGTGCCCCGAGCGCGCTGCAACTGGCACAGATATGCCAG
ATTAATGGGGTGTACGAGAAGACGATGGGCCGTGTGCTCTTTCAGAGCTACGTAATATGGATTCTCCCGTCTACG
CTATTACTCACAGTCATGGCACTGGAGGTTGTCAAGTTGGCAGCTGTGTGA
Gene >Ophun1|1754
ATGGACTCTGCCAACTCGTTCGCCGGGCCCGTCTCCTACCGTCTGGCCCATGTCGTCCAAAATGCCTACGAGTAC
CCCATGGCCGTCCTCCAAGGACAGCCGTCAGACCACCCTTCGCTCCCTCATCTGTGTCTCCTCGTCTTTGAGGCC
GTCCTCGAGGTCGTCTGCGTCAGTCTTCCGGGCTACATCATCGCCCGCCTCGGCCACTTTGATGCCGACAAGCAA
AAATTCCTGGCAAACCTCAACGTCATGCTGTTTACCCCATGCCTGAGTAAGTCTCGGAAACTGGCGAGACTGACG
AAACGCTGACAAACTTGACAGTCTTTACGAAGCTGGCCTCGCAGCTCAACGCCGAAAAGCTGACCGAACTCGCCA
TCATCCCCGCCATCTTTGTCCTGCAAACATTGATATCGTGGATCGTCTCCACTCTCCTTTCCAAGGCGTTCCGAT
TCAATCGACGAGCCTCCAACTTTGTCACCGCCATGGGTGTCTTTGGCAACTCCAACTCGCTGCCCATTTCTCTCG
TCCTCTCCCTTTCGCAGACCATCAAGGGCCTGCACTGGGACCGCATCGCTGGGGACAACGACGACGAGGTCGCCG
CCCGAGGCATCCTCTATCTTCTCATATTTCAACAACTCGGCCAACTGGTCAGATGGAGCTGGGGATATCACGTGC
TGCTCGCCCCCAAGGACAAGTATCCCGAATACCAGCAGCAGATTGCCGAGGAGGGCTCTGCCCGCTACGAGGCTC
ACAACGAGCAAGAGACCCGGGGGCTCATTGACGGCCTCGACGACCCAGAGACGGAAGACGACGAGCGCCAAAGCG
TCGACTCTCGCACCTACGTGCCCGACGGCCAGACTCCGCTCGCCGGCACCTCGAGGACCTCTGCCGAATCGAGCG
ACGACGAGTTTGCGCCAAAGAAGCCGCAGCGTCCCGACTCGACCCCGCGCAACGACGTCGTTCCCGGGAGTGCAC
CCGAAACCCTGGCGTTTCCGCGAGTCGGTGGCAGCGCTTTCCGCAGTCAACCCCCCAGGCCCGATGGAGTCTGGG
CTTCGTTCAAGGCATCGGCCGCCGAGAGGTCTCGATCTCTACAGGGCAGGACGAGCCGCTACCTAAACGACGTGT
GCGAGAGAATACCGGAACCGGTGCGCGTCCCCATGTCCGTCTTGGTCAAGGCCTCGAAGAAGATGGCGTACCTCG
TTTGGGAGTTTATGAACCCGCCGCTGTGGGCGATGCTCATTGCCATAACCGTGGCATCGATCCCCGCCCTTCAAA
AGCTCTTTTTCGAAGAGGGGACCTTTATCAATAACAGTGTAACGAGCGCCGTCAAGTCGAGCGGTGGCGTTGCCG
TCCCTTTGATCCTGGTCGTCTTGGGCGCAAACCTGGCTAGAAACACAATGGCACGCGACGACAACCACGATGCCG
AGGAGGAGCAGCTCGGCACCAAGCTGCTGGTGGCGTCTTTGCTGAGCCGCATGGTCTTGCCGACTGTCATTATGG
CCCCGATTTTGGCTCTGATGGCAAAGTATCTGCCCGTCAGCATTCTCGACGATCCCATCTTCATTGTCGTCTGCT
TCCTACTCACCGGTGCCCCGAGCGCGCTGCAACTGGCACAGATATGCCAGATTAATGGGGTGTACGAGAAGACGA
TGGGCCGTGTGCTCTTTCAGAGCTACGTAATATGGTGCGTCACCGTTACTGCTTTATGACCGTTATGACTGCTTC
AACTGCTTATGACGCGTTGTGATGACCGCGACGATGCTGACCTACTTTAGGATTCTCCCGTCTACGCTATTACTC
ACAGTCATGGCACTGGAGGTTGTCAAGTTGGCAGCTGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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