Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1712
Gene name
LocationContig_174:18521..20295
Strand+
Gene length (bp)1774
Transcript length (bp)1527
Coding sequence length (bp)1527
Protein length (aa) 509

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 1.5E-13 8 163

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 1 294 5.0E-63
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 1 234 7.0E-52
sp|O93956|PALI_EMENI pH-response regulator protein palI/RIM9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palI PE=1 SV=2 1 304 8.0E-42
sp|Q7Z8R5|PALI_YARLI pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 2 244 1.0E-36
sp|Q759Y2|PALI_ASHGO pH-response regulator protein palI/RIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM9 PE=3 SV=1 23 196 2.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 1 294 5.0E-63
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 1 234 7.0E-52
sp|O93956|PALI_EMENI pH-response regulator protein palI/RIM9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palI PE=1 SV=2 1 304 8.0E-42
sp|Q7Z8R5|PALI_YARLI pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 2 244 1.0E-36
sp|Q759Y2|PALI_ASHGO pH-response regulator protein palI/RIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM9 PE=3 SV=1 23 196 2.0E-18
sp|O74472|MUG33_SCHPO Meiotically up-regulated gene 33 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug33 PE=1 SV=1 3 215 4.0E-18
sp|Q6CUG3|PALI2_KLULA pH-response regulator palI/RIM9 homolog 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0C05060g PE=3 SV=1 22 193 5.0E-16
sp|Q6CXZ7|PALI1_KLULA pH-response regulator palI/RIM9 homolog 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0A04389g PE=3 SV=1 15 191 4.0E-15
sp|Q04734|PALI_YEAST pH-response regulator protein palI/RIM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM9 PE=1 SV=1 12 203 1.0E-13
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 421 505 4.0E-11
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 411 494 2.0E-07
sp|Q10268|MAC1_SCHPO Membrane-anchored protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mac1 PE=1 SV=1 18 230 4.0E-06
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GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0110165 cellular anatomical entity No
GO:0016020 membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 82 104 22
3 117 139 22
4 149 171 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1712
MFRPSTPLSVLLLAAFVLLLATTLSVPILKTIPLASFNDVNFGALGFCKGDQCTLTLGLDTAALLDNEKQAFAVP
TSTRNAISFALVLHPIAAALALAISIMAIASHLRPLSHSTRYLLILFVLIFLTFLASLAAFLVDILLFLPHLQFG
AFLTLTATIVLGISGIASCTMRRAVLSRLAHRRRVEDNAEMSGENYHLDSISKPSFTSSTEPTLPVVGTVMSAVD
SKPQFAAFEYSSKANMAGDMSPSSPGPPQYLASSNMYGDRPPVRAGAMGPLRGGGGMPTRGRGGFGSPLGRGGYP
VATRGFGSPPPSRGGFGSPPPGRGGYSSPGRGGAVGLPERVSPHEGGPGPPRAAIGARGGRGGAQGFGNAARQYD
ASPVTFAPARTGWNNDAASQDGDDFDVYSLYENGPYDDGEPMPRPRSPAESDRSGFTSISQRGVNPRWRGKAPPP
RRPSNASLVPRGLAPQKPLRRPDVLLDNPDFSLGGGGGGARRGGMGLTPGSAYPTTAF*
Coding >Ophun1|1712
ATGTTTCGTCCGTCGACGCCCCTGTCGGTGCTGCTGCTCGCCGCCTTCGTCCTGCTGCTCGCGACCACCCTTTCC
GTCCCCATCCTCAAGACTATCCCTCTGGCCTCGTTCAACGACGTCAACTTTGGCGCCTTGGGTTTCTGCAAAGGG
GACCAATGTACCCTGACCCTCGGCTTGGACACCGCCGCACTTCTCGATAATGAGAAGCAGGCCTTTGCCGTGCCC
ACCAGCACGCGCAATGCCATCTCCTTCGCCCTCGTCCTGCATCCCATCGCCGCCGCCCTCGCTCTCGCCATATCC
ATCATGGCCATCGCCTCTCACCTTCGCCCCCTATCTCACTCGACTCGATACTTACTCATCCTCTTCGTCCTCATC
TTTCTCACCTTTCTCGCCTCCTTGGCCGCCTTTTTGGTCGATATCCTCCTCTTCTTGCCACATCTGCAATTCGGA
GCTTTCCTGACTTTGACCGCAACCATTGTGCTCGGAATAAGCGGCATCGCCTCGTGTACCATGCGACGTGCTGTC
CTCAGCCGCTTGGCTCACAGGCGGCGTGTCGAAGACAATGCCGAAATGAGCGGCGAAAACTACCACCTTGACTCC
ATATCGAAACCGTCCTTTACGTCCTCAACGGAACCCACGCTCCCCGTGGTTGGCACCGTCATGTCGGCTGTCGAC
AGCAAGCCCCAATTTGCCGCCTTCGAGTACAGCAGCAAGGCCAACATGGCCGGCGACATGTCGCCCTCCTCGCCT
GGTCCGCCCCAGTATCTCGCCTCCAGCAACATGTACGGAGACCGCCCGCCGGTCAGGGCCGGAGCAATGGGGCCT
CTTCGAGGCGGCGGCGGAATGCCGACTCGCGGTAGGGGAGGGTTTGGCTCGCCGCTTGGCCGGGGCGGGTACCCC
GTTGCCACCCGAGGCTTCGGCTCCCCCCCCCCCTCTCGGGGAGGCTTCGGCTCACCTCCGCCCGGTAGGGGAGGC
TACAGTTCGCCCGGTAGGGGAGGGGCCGTGGGCTTGCCTGAAAGGGTGAGTCCTCATGAAGGAGGCCCGGGCCCG
CCTCGCGCCGCCATCGGGGCACGTGGAGGTCGGGGCGGCGCCCAGGGCTTCGGCAACGCTGCCAGGCAATACGAC
GCTAGTCCTGTTACTTTCGCGCCCGCGCGAACGGGGTGGAACAACGATGCAGCATCTCAAGATGGCGATGATTTT
GACGTGTATTCACTTTATGAGAATGGGCCGTACGACGACGGCGAACCGATGCCGAGACCGCGCAGCCCCGCCGAG
TCGGATCGGTCCGGATTCACGTCGATATCGCAGAGAGGCGTCAACCCGCGGTGGAGAGGCAAGGCGCCGCCGCCC
CGACGACCGTCCAACGCGAGCCTGGTGCCCCGTGGGCTGGCGCCGCAGAAGCCTCTGAGGCGGCCGGACGTGCTG
CTGGACAATCCGGACTTTTCGCTGGGGGGCGGCGGAGGAGGCGCGCGGCGAGGAGGCATGGGCTTGACGCCTGGA
AGCGCGTATCCGACGACAGCCTTCTAA
Transcript >Ophun1|1712
ATGTTTCGTCCGTCGACGCCCCTGTCGGTGCTGCTGCTCGCCGCCTTCGTCCTGCTGCTCGCGACCACCCTTTCC
GTCCCCATCCTCAAGACTATCCCTCTGGCCTCGTTCAACGACGTCAACTTTGGCGCCTTGGGTTTCTGCAAAGGG
GACCAATGTACCCTGACCCTCGGCTTGGACACCGCCGCACTTCTCGATAATGAGAAGCAGGCCTTTGCCGTGCCC
ACCAGCACGCGCAATGCCATCTCCTTCGCCCTCGTCCTGCATCCCATCGCCGCCGCCCTCGCTCTCGCCATATCC
ATCATGGCCATCGCCTCTCACCTTCGCCCCCTATCTCACTCGACTCGATACTTACTCATCCTCTTCGTCCTCATC
TTTCTCACCTTTCTCGCCTCCTTGGCCGCCTTTTTGGTCGATATCCTCCTCTTCTTGCCACATCTGCAATTCGGA
GCTTTCCTGACTTTGACCGCAACCATTGTGCTCGGAATAAGCGGCATCGCCTCGTGTACCATGCGACGTGCTGTC
CTCAGCCGCTTGGCTCACAGGCGGCGTGTCGAAGACAATGCCGAAATGAGCGGCGAAAACTACCACCTTGACTCC
ATATCGAAACCGTCCTTTACGTCCTCAACGGAACCCACGCTCCCCGTGGTTGGCACCGTCATGTCGGCTGTCGAC
AGCAAGCCCCAATTTGCCGCCTTCGAGTACAGCAGCAAGGCCAACATGGCCGGCGACATGTCGCCCTCCTCGCCT
GGTCCGCCCCAGTATCTCGCCTCCAGCAACATGTACGGAGACCGCCCGCCGGTCAGGGCCGGAGCAATGGGGCCT
CTTCGAGGCGGCGGCGGAATGCCGACTCGCGGTAGGGGAGGGTTTGGCTCGCCGCTTGGCCGGGGCGGGTACCCC
GTTGCCACCCGAGGCTTCGGCTCCCCCCCCCCCTCTCGGGGAGGCTTCGGCTCACCTCCGCCCGGTAGGGGAGGC
TACAGTTCGCCCGGTAGGGGAGGGGCCGTGGGCTTGCCTGAAAGGGTGAGTCCTCATGAAGGAGGCCCGGGCCCG
CCTCGCGCCGCCATCGGGGCACGTGGAGGTCGGGGCGGCGCCCAGGGCTTCGGCAACGCTGCCAGGCAATACGAC
GCTAGTCCTGTTACTTTCGCGCCCGCGCGAACGGGGTGGAACAACGATGCAGCATCTCAAGATGGCGATGATTTT
GACGTGTATTCACTTTATGAGAATGGGCCGTACGACGACGGCGAACCGATGCCGAGACCGCGCAGCCCCGCCGAG
TCGGATCGGTCCGGATTCACGTCGATATCGCAGAGAGGCGTCAACCCGCGGTGGAGAGGCAAGGCGCCGCCGCCC
CGACGACCGTCCAACGCGAGCCTGGTGCCCCGTGGGCTGGCGCCGCAGAAGCCTCTGAGGCGGCCGGACGTGCTG
CTGGACAATCCGGACTTTTCGCTGGGGGGCGGCGGAGGAGGCGCGCGGCGAGGAGGCATGGGCTTGACGCCTGGA
AGCGCGTATCCGACGACAGCCTTCTAA
Gene >Ophun1|1712
ATGTTTCGTCCGTCGACGCCCCTGTCGGTGCTGCTGCTCGCCGCCTTCGTCCTGCTGCTCGCGACCACCCTTTCC
GTCCCCATCCTCAAGACTATCCCTCTGGCCTCGTTCAACGACGTCAACTTTGGCGCCTTGGGTTTCTGCAAAGGG
GACCAATGTACCCTGACCCTCGGCTTGGACACCGGTATGATTTCTCTCGTCCGCTCTCTCTCGTTCTCGTCTGAC
CCGTCGTGCTGCAGCCGCACTTCTCGATAATGAGAAGCAGGCCTTTGCCGTGCCCACCAGCACGCGCAATGCCAT
CTCCTTCGCCCTCGTCCTGCATCCCATCGCCGCCGCCCTCGCTCTCGCCATATCCATCATGGCCATCGCCTCTCA
CCTTCGCCCCCTATCTCACTCGACTCGATACTTACTCATCCTCTTCGTCCTCATCTTTCTCACCTTTCTCGCCTC
CTTGGCCGCCTTTTTGGTCGATATCCTCCTCTTCTTGCCACATCTGCAATTCGGAGCTTTCCTGACTTTGACCGC
AACCATTGTGCTCGGAATAAGCGGCATCGCCTCGTGTACCATGCGACGTGCTGTCCTCAGCCGCTTGGCTCACAG
GCGGCGTGTCGAAGACAATGCCGAAATGAGCGGCGAAAACTACCACCTTGACTCCATATCGAAACCGTCCTTTAC
GTCCTCAACGGAACCCACGCTCCCCGTGGTTGGCACCGTCATGTCGGCTGTCGACAGCAAGCCCCAATTTGCCGC
CTTCGAGTACAGCAGCAAGGCCAACATGGCCGGCGACATGTCGCCCTCCTCGCCTGGTCCGCCCCAGTATCTCGC
CTCCAGCAACATGTACGGAGACCGCCCGCCGGTCAGGGCCGGAGCAATGGGGCCTCTTCGAGGCGGCGGCGGAAT
GCCGACTCGCGGTAGGGGAGGGTTTGGCTCGCCGCTTGGCCGGGGCGGGTACCCCGTTGCCACCCGAGGCTTCGG
CTCCCCCCCCCCCTCTCGGGGAGGCTTCGGCTCACCTCCGCCCGGTAGGGGAGGCTACAGTTCGCCCGGTAGGGG
AGGGGCCGTGGGCTTGCCTGAAAGGGTGAGTCCTCATGAAGGAGGCCCGGGCCCGCCTCGCGCCGCCATCGGGGC
ACGTGGAGGTCGGGGCGGCGCCCAGGGCTTCGGCAACGCTGCCAGGCAATACGACGCTAGTCCTGTGTACGGACA
AGGGCACATGAGATCGAGAAGCAACAGCCCGGAGCGAATGGCATACGGGAGCCCCCCCCGGGCGGATTCGCCGCC
GTTACGGGGAAGGGTGGCGTCGATGGAGAGCACATATAGCCAAGACGAGTAAGCGCACCATGGTCTTCACCTCGA
GGGTAGCAGCTACTGACGTGACATTGTTCATAGTACTTTCGCGCCCGCGCGAACGGGGTGGAACAACGATGCAGC
ATCTCAAGATGGCGATGATTTTGACGTGTATTCACTTTATGAGAATGGGCCGTACGACGACGGCGAACCGATGCC
GAGACCGCGCAGCCCCGCCGAGTCGGATCGGTCCGGATTCACGTCGATATCGCAGAGAGGCGTCAACCCGCGGTG
GAGAGGCAAGGCGCCGCCGCCCCGACGACCGTCCAACGCGAGCCTGGTGCCCCGTGGGCTGGCGCCGCAGAAGCC
TCTGAGGCGGCCGGACGTGCTGCTGGACAATCCGGACTTTTCGCTGGGGGGCGGCGGAGGAGGCGCGCGGCGAGG
AGGCATGGGCTTGACGCCTGGAAGCGCGTATCCGACGACAGCCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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