© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1709 |
| Gene name | |
| Location | Contig_174:9103..10362 |
| Strand | - |
| Gene length (bp) | 1259 |
| Transcript length (bp) | 1146 |
| Coding sequence length (bp) | 1146 |
| Protein length (aa) | 382 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00650 | CRAL_TRIO | CRAL/TRIO domain | 2.9E-23 | 109 | 286 |
| PF03765 | CRAL_TRIO_N | CRAL/TRIO, N-terminal domain | 2.2E-08 | 35 | 75 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P33324|YKJ1_YEAST | CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 | 18 | 287 | 9.0E-25 |
| sp|P46250|SEC14_CANAL | SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 | 4 | 314 | 1.0E-24 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 4 | 295 | 8.0E-22 |
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 1 | 290 | 2.0E-21 |
| sp|F4JYJ3|SFH11_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1 | 29 | 311 | 4.0E-19 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P33324|YKJ1_YEAST | CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 | 18 | 287 | 9.0E-25 |
| sp|P46250|SEC14_CANAL | SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 | 4 | 314 | 1.0E-24 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 4 | 295 | 8.0E-22 |
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 1 | 290 | 2.0E-21 |
| sp|F4JYJ3|SFH11_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1 | 29 | 311 | 4.0E-19 |
| sp|P45816|SEC14_YARLI | SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 | 4 | 286 | 1.0E-18 |
| sp|F4JVA9|SFH2_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN=SFH2 PE=2 SV=1 | 20 | 301 | 8.0E-18 |
| sp|P53989|SEC14_CANGA | SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 | 8 | 295 | 2.0E-17 |
| sp|Q75DK1|SEC14_ASHGO | SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 | 4 | 295 | 2.0E-17 |
| sp|Q9SIW3|SFH7_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 OS=Arabidopsis thaliana GN=SFH7 PE=2 SV=2 | 30 | 290 | 6.0E-17 |
| sp|Q93ZE9|SFH3_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana GN=SFH3 PE=2 SV=1 | 20 | 290 | 8.0E-17 |
| sp|Q9SI13|SFH10_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana GN=SFH10 PE=3 SV=1 | 25 | 300 | 1.0E-16 |
| sp|F4JLE5|SFH1_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana GN=SFH1 PE=2 SV=1 | 23 | 300 | 1.0E-16 |
| sp|P58875|S14L2_BOVIN | SEC14-like protein 2 OS=Bos taurus GN=SEC14L2 PE=1 SV=2 | 18 | 288 | 2.0E-16 |
| sp|Q99MS0|S14L2_RAT | SEC14-like protein 2 OS=Rattus norvegicus GN=Sec14l2 PE=1 SV=1 | 18 | 288 | 2.0E-16 |
| sp|Q94A34|SFH12_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH12 OS=Arabidopsis thaliana GN=SFH12 PE=2 SV=1 | 25 | 300 | 2.0E-16 |
| sp|F4J7S8|SFH9_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana GN=SFH9 PE=2 SV=1 | 26 | 306 | 4.0E-16 |
| sp|Q99J08|S14L2_MOUSE | SEC14-like protein 2 OS=Mus musculus GN=Sec14l2 PE=1 SV=1 | 18 | 288 | 1.0E-15 |
| sp|F4IHJ0|SFH8_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1 | 26 | 300 | 1.0E-15 |
| sp|Q9UDX3|S14L4_HUMAN | SEC14-like protein 4 OS=Homo sapiens GN=SEC14L4 PE=1 SV=1 | 19 | 288 | 2.0E-15 |
| sp|Q92503|S14L1_HUMAN | SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 | 4 | 307 | 5.0E-15 |
| sp|Q8R0F9|S14L4_MOUSE | SEC14-like protein 4 OS=Mus musculus GN=Sec14l4 PE=1 SV=1 | 17 | 288 | 6.0E-15 |
| sp|P24859|SEC14_KLULA | SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 | 18 | 295 | 1.0E-14 |
| sp|F4JVA6|SFH6_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1 | 26 | 300 | 2.0E-14 |
| sp|Q0V9N0|S14L5_XENTR | SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1 | 11 | 302 | 2.0E-14 |
| sp|O76054|S14L2_HUMAN | SEC14-like protein 2 OS=Homo sapiens GN=SEC14L2 PE=1 SV=1 | 18 | 288 | 5.0E-14 |
| sp|F4HP88|SFH4_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH4 OS=Arabidopsis thaliana GN=SFH4 PE=2 SV=1 | 48 | 300 | 8.0E-14 |
| sp|O43304|S14L5_HUMAN | SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3 | 1 | 302 | 7.0E-13 |
| sp|Q7PWB1|RETM_ANOGA | Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 | 14 | 298 | 2.0E-12 |
| sp|Q9UDX4|S14L3_HUMAN | SEC14-like protein 3 OS=Homo sapiens GN=SEC14L3 PE=1 SV=1 | 18 | 288 | 2.0E-12 |
| sp|Q757H2|CSR1_ASHGO | Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2 | 24 | 301 | 2.0E-12 |
| sp|Q9Z1J8|S14L3_RAT | SEC14-like protein 3 OS=Rattus norvegicus GN=Sec14l3 PE=1 SV=1 | 18 | 288 | 3.0E-12 |
| sp|Q06705|CSR1_YEAST | Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1 | 54 | 324 | 1.0E-10 |
| sp|F4K6D3|SFH14_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 OS=Arabidopsis thaliana GN=SFH14 PE=2 SV=1 | 26 | 290 | 2.0E-10 |
| sp|Q8GXC6|SFH5_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH5 OS=Arabidopsis thaliana GN=SFH5 PE=2 SV=1 | 26 | 290 | 2.0E-10 |
| sp|Q29JQ0|RETM_DROPS | Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1 | 19 | 302 | 3.0E-10 |
| sp|Q9VMD6|RETM_DROME | Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2 | 20 | 302 | 9.0E-10 |
| sp|B5MCN3|S14L6_HUMAN | Putative SEC14-like protein 6 OS=Homo sapiens GN=SEC14L6 PE=5 SV=1 | 18 | 288 | 1.0E-09 |
| sp|Q501H5|SFH13_ARATH | Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 OS=Arabidopsis thaliana GN=SFH13 PE=2 SV=1 | 34 | 295 | 7.0E-08 |
| Orthofinder run ID | 4 |
| Orthogroup | 6505 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1709 MSAIASPPTGLVPEYPRGHVGHLTAEQAEALDSFKALLEERDMWQRGPPASHDDGTLLRFLRARQWVPDKAVEQF ASSLSWLTTADVNKLRSTMEVSQWQQSRASVPVWTGRRDKRGQPIYYVDCGAVDEKAWTEKGQTKAVRAFAASKA NSEVTASMLTSVLHLEMMEHVFNPMCSRTTDRLHPEVPVTMATYVADIGQLSLRRFWTVKNHVFSLLTSISVLFP ETASHIFILNAPSYVGVMWNWVRSWLDPVTASKVVILKAHEVKPALEAYIHPSNIPVRYGGTLDCDFSDGPVLDD SLRAVVEWEPSFEGLPPGPLTVEADGDLLVCYTSGVEDGKPRRQKVFTIPAQVGSSNKSIEVVDEKHAPGCVVVP TASVEA* |
| Coding | >Ophun1|1709 ATGTCCGCCATCGCCAGCCCGCCAACGGGGCTCGTGCCTGAGTATCCACGTGGCCATGTTGGACACCTGACTGCC GAGCAGGCGGAGGCTCTGGATAGCTTCAAGGCTCTGCTGGAAGAGCGGGATATGTGGCAGCGCGGTCCGCCGGCT TCGCACGACGATGGCACTCTTCTCCGCTTTCTTCGGGCTCGGCAGTGGGTGCCTGACAAGGCGGTCGAGCAGTTC GCCAGCAGTCTCTCCTGGTTAACAACCGCCGACGTCAACAAACTGCGATCCACCATGGAAGTATCGCAGTGGCAG CAATCTCGCGCCTCGGTCCCCGTCTGGACCGGCCGACGAGACAAACGCGGCCAGCCCATCTACTACGTCGACTGC GGCGCCGTCGACGAGAAAGCCTGGACGGAAAAGGGTCAGACCAAGGCGGTGCGGGCCTTTGCAGCAAGCAAGGCA AACTCGGAGGTGACGGCTTCGATGCTGACGTCGGTGCTTCATCTTGAGATGATGGAACACGTCTTCAATCCCATG TGTTCGCGCACCACCGATAGGCTTCATCCAGAGGTGCCCGTCACAATGGCCACGTACGTAGCCGACATCGGCCAG CTCTCGCTCCGCAGGTTCTGGACGGTGAAGAACCACGTCTTCTCGCTACTGACGAGCATCTCGGTCCTCTTCCCG GAGACGGCATCGCACATCTTCATCCTCAACGCGCCATCTTACGTCGGAGTCATGTGGAACTGGGTTCGCTCTTGG CTCGATCCCGTCACAGCCTCCAAGGTCGTCATCCTCAAGGCCCACGAGGTGAAGCCCGCGCTCGAGGCGTATATC CATCCGAGTAACATCCCCGTTCGCTACGGAGGTACCCTCGACTGTGATTTCTCCGACGGGCCTGTGCTTGACGAT AGCTTGCGCGCGGTTGTTGAATGGGAGCCTTCCTTTGAGGGTCTGCCTCCTGGGCCGCTCACTGTCGAGGCTGAT GGTGATTTACTCGTTTGCTACACCTCCGGAGTCGAGGATGGCAAGCCCCGGAGGCAAAAGGTATTCACCATACCG GCGCAGGTCGGCTCGTCAAACAAGTCGATCGAGGTGGTGGACGAGAAGCACGCTCCCGGATGCGTCGTCGTCCCT ACAGCCTCGGTAGAGGCGTAA |
| Transcript | >Ophun1|1709 ATGTCCGCCATCGCCAGCCCGCCAACGGGGCTCGTGCCTGAGTATCCACGTGGCCATGTTGGACACCTGACTGCC GAGCAGGCGGAGGCTCTGGATAGCTTCAAGGCTCTGCTGGAAGAGCGGGATATGTGGCAGCGCGGTCCGCCGGCT TCGCACGACGATGGCACTCTTCTCCGCTTTCTTCGGGCTCGGCAGTGGGTGCCTGACAAGGCGGTCGAGCAGTTC GCCAGCAGTCTCTCCTGGTTAACAACCGCCGACGTCAACAAACTGCGATCCACCATGGAAGTATCGCAGTGGCAG CAATCTCGCGCCTCGGTCCCCGTCTGGACCGGCCGACGAGACAAACGCGGCCAGCCCATCTACTACGTCGACTGC GGCGCCGTCGACGAGAAAGCCTGGACGGAAAAGGGTCAGACCAAGGCGGTGCGGGCCTTTGCAGCAAGCAAGGCA AACTCGGAGGTGACGGCTTCGATGCTGACGTCGGTGCTTCATCTTGAGATGATGGAACACGTCTTCAATCCCATG TGTTCGCGCACCACCGATAGGCTTCATCCAGAGGTGCCCGTCACAATGGCCACGTACGTAGCCGACATCGGCCAG CTCTCGCTCCGCAGGTTCTGGACGGTGAAGAACCACGTCTTCTCGCTACTGACGAGCATCTCGGTCCTCTTCCCG GAGACGGCATCGCACATCTTCATCCTCAACGCGCCATCTTACGTCGGAGTCATGTGGAACTGGGTTCGCTCTTGG CTCGATCCCGTCACAGCCTCCAAGGTCGTCATCCTCAAGGCCCACGAGGTGAAGCCCGCGCTCGAGGCGTATATC CATCCGAGTAACATCCCCGTTCGCTACGGAGGTACCCTCGACTGTGATTTCTCCGACGGGCCTGTGCTTGACGAT AGCTTGCGCGCGGTTGTTGAATGGGAGCCTTCCTTTGAGGGTCTGCCTCCTGGGCCGCTCACTGTCGAGGCTGAT GGTGATTTACTCGTTTGCTACACCTCCGGAGTCGAGGATGGCAAGCCCCGGAGGCAAAAGGTATTCACCATACCG GCGCAGGTCGGCTCGTCAAACAAGTCGATCGAGGTGGTGGACGAGAAGCACGCTCCCGGATGCGTCGTCGTCCCT ACAGCCTCGGTAGAGGCGTAA |
| Gene | >Ophun1|1709 ATGTCCGCCATCGCCAGCCCGCCAACGGGGCTCGTGCCTGAGTATCCACGTGGCCATGTTGGACACCTGACTGCC GAGCAGGCGGAGGCTCTGGATAGCTTCAAGGCTCTGCTGGAAGAGCGGGATATGTGGCAGCGCGGTCCGCCGGCT TCGCACGACGATGGCACTCTTCTGTAGGGATGCTTGTGTTCCTGTGTGTGTGTGTGTGTGTGTTTCTCTGGCTGA CTGTTGGCAGCCGCTTTCTTCGGGCTCGGCAGTGGGTGCCTGACAAGGCGGTCGAGCAGTTCGCCAGCAGTCTCT CCTGGTTAACAACCGCCGACGTCAACAAACTGCGATCCACCATGGAAGTATCGCAGTGGCAGCAATCTCGCGCCT CGGTTCGTCTCCCCCTCGATCGAGCTATTCGCCCCAAGCGCTCATCCGTATAGGTCCCCGTCTGGACCGGCCGAC GAGACAAACGCGGCCAGCCCATCTACTACGTCGACTGCGGCGCCGTCGACGAGAAAGCCTGGACGGAAAAGGGTC AGACCAAGGCGGTGCGGGCCTTTGCAGCAAGCAAGGCAAACTCGGAGGTGACGGCTTCGATGCTGACGTCGGTGC TTCATCTTGAGATGATGGAACACGTCTTCAATCCCATGTGTTCGCGCACCACCGATAGGCTTCATCCAGAGGTGC CCGTCACAATGGCCACGTACGTAGCCGACATCGGCCAGCTCTCGCTCCGCAGGTTCTGGACGGTGAAGAACCACG TCTTCTCGCTACTGACGAGCATCTCGGTCCTCTTCCCGGAGACGGCATCGCACATCTTCATCCTCAACGCGCCAT CTTACGTCGGAGTCATGTGGAACTGGGTTCGCTCTTGGCTCGATCCCGTCACAGCCTCCAAGGTCGTCATCCTCA AGGCCCACGAGGTGAAGCCCGCGCTCGAGGCGTATATCCATCCGAGTAACATCCCCGTTCGCTACGGAGGTACCC TCGACTGTGATTTCTCCGACGGGCCTGTGCTTGACGATAGCTTGCGCGCGGTTGTTGAATGGGAGCCTTCCTTTG AGGGTCTGCCTCCTGGGCCGCTCACTGTCGAGGCTGATGGTGATTTACTCGTTTGCTACACCTCCGGAGTCGAGG ATGGCAAGCCCCGGAGGCAAAAGGTATTCACCATACCGGCGCAGGTCGGCTCGTCAAACAAGTCGATCGAGGTGG TGGACGAGAAGCACGCTCCCGGATGCGTCGTCGTCCCTACAGCCTCGGTAGAGGCGTAA |