Protein ID | Ophun1|1697 |
Gene name | |
Location | Contig_173:20497..21692 |
Strand | + |
Gene length (bp) | 1195 |
Transcript length (bp) | 768 |
Coding sequence length (bp) | 768 |
Protein length (aa) | 256 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 4.3E-18 | 93 | 197 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 3.4E-14 | 104 | 244 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 3.8E-05 | 29 | 89 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|A7RK30|QORL2_NEMVE | Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1 | 85 | 245 | 4.0E-25 |
sp|A6QQF5|QORL2_BOVIN | Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 | 94 | 246 | 1.0E-17 |
sp|Q3UNZ8|QORL2_MOUSE | Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 | 90 | 246 | 1.0E-17 |
sp|B0BNC9|QORL2_RAT | Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 | 94 | 246 | 1.0E-17 |
sp|Q8JFV8|VAT1_DANRE | Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1 | 88 | 248 | 2.0E-09 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|A7RK30|QORL2_NEMVE | Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1 | 85 | 245 | 4.0E-25 |
sp|A6QQF5|QORL2_BOVIN | Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 | 94 | 246 | 1.0E-17 |
sp|Q3UNZ8|QORL2_MOUSE | Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 | 90 | 246 | 1.0E-17 |
sp|B0BNC9|QORL2_RAT | Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 | 94 | 246 | 1.0E-17 |
sp|Q8JFV8|VAT1_DANRE | Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1 | 88 | 248 | 2.0E-09 |
sp|Q8BGC4|ZADH2_MOUSE | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=1 SV=1 | 92 | 249 | 8.0E-09 |
sp|P42865|QOR_LEIAM | Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1 | 83 | 246 | 2.0E-08 |
sp|Q3MIE4|VAT1_RAT | Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus GN=Vat1 PE=1 SV=1 | 88 | 252 | 3.0E-08 |
sp|Q24K16|ZADH2_BOVIN | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1 | 95 | 248 | 5.0E-08 |
sp|Q3UNZ8|QORL2_MOUSE | Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 | 21 | 90 | 8.0E-08 |
sp|Q62465|VAT1_MOUSE | Synaptic vesicle membrane protein VAT-1 homolog OS=Mus musculus GN=Vat1 PE=1 SV=3 | 88 | 252 | 1.0E-07 |
sp|P38230|QOR_YEAST | Probable quinone oxidoreductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZTA1 PE=1 SV=1 | 92 | 247 | 3.0E-07 |
sp|Q99536|VAT1_HUMAN | Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2 | 88 | 252 | 7.0E-07 |
sp|B0BNC9|QORL2_RAT | Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 | 28 | 98 | 1.0E-06 |
sp|A6QQF5|QORL2_BOVIN | Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 | 24 | 90 | 2.0E-06 |
sp|Q8N4Q0|ZADH2_HUMAN | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1 | 92 | 247 | 2.0E-06 |
Orthofinder run ID | 4 |
Orthogroup | 987 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1697 MRAIVINKYVEKPSDLTATTAPDPSPKPGEYTIQIHAAAANFFDILQIQGRYQTQPPFPWVAGVEFAGTVLSVPP SPSPSSFQVGDRVFGGTQDRKLAVARSYGAHHAVSYTSPDWPSRVKQLTPNQRGVDIVFDPVGLVDASTKCTAWN GRILVVGFAAGAIEKVPVNKVLLKNIALVGIFWGAYAVNQPEVVPQVWHGVMRLISEGKLRPTVYQDDGFAGLDS VKDALSALASRRTWGKVVITIPPPQETSRL* |
Coding | >Ophun1|1697 ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCC CCCAAGCCAGGAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGC CGATACCAAACCCAACCCCCCTTCCCCTGGGTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCC TCACCCTCACCGTCGAGCTTTCAAGTCGGAGATCGCGTCTTTGGCGGCACGCAGGACCGCAAACTCGCCGTGGCA CGATCCTACGGCGCCCATCATGCCGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCG AACCAGCGAGGCGTCGACATCGTCTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAAC GGACGGATCCTCGTCGTCGGCTTCGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAAC ATCGCCCTCGTTGGCATCTTTTGGGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGG GTTATGCGCTTGATTTCTGAGGGGAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGT GTCAAGGATGCTCTCTCTGCTCTGGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAA GAGACGAGCCGGTTGTGA |
Transcript | >Ophun1|1697 ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCC CCCAAGCCAGGAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGC CGATACCAAACCCAACCCCCCTTCCCCTGGGTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCC TCACCCTCACCGTCGAGCTTTCAAGTCGGAGATCGCGTCTTTGGCGGCACGCAGGACCGCAAACTCGCCGTGGCA CGATCCTACGGCGCCCATCATGCCGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCG AACCAGCGAGGCGTCGACATCGTCTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAAC GGACGGATCCTCGTCGTCGGCTTCGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAAC ATCGCCCTCGTTGGCATCTTTTGGGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGG GTTATGCGCTTGATTTCTGAGGGGAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGT GTCAAGGATGCTCTCTCTGCTCTGGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAA GAGACGAGCCGGTTGTGA |
Gene | >Ophun1|1697 ATGCGCGCAATCGTCATAAACAAATACGTCGAGGTCCGTCCCCTCCTTGCAACCTCGCCAGAGACATCACACCCA AACAGACAACCAACACCATACAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCCCCCAAGCCAG GAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGCCGATACCAAA CCCAACCCCGTTACTCTTCCCCCTCCTCACCCCCTTCACCACAGCCAGCTAACGACATGAAAAGCCTTCCCCTGG GTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCCTCACCCTCACCGTCGAGCTTTCAAGTCGGA GATCGCGTCTTTGGCGGCACGCAGGGTGCGTTTGCGGAGAGGGTTTGCGCGAGGGGGGAGACGATTCGCGCTGTT CCCCCGGGGTGGGACTTTGCGGATGCGGCGGGCTTGTTCGTCACTGCGCCGACGAGTTACGCTGCTCTCGTGACG AGAGCGGGCGTCAAGAAGGGCGATGTAGTCCTCGTTCACGCCGCAGCAGGCGGAGTCGGACTCGCCGCTGTGCAA GGTAAACCCTTCCCCCCTTTGCAAGACGAAAACCTCTTAGAACTAAAGAGAAGAAACAAAAGTGGCAAAAGCCTT CGGAGCAACCGTCATCGCAACAGCCTCATCAGACCGCAAACTCGCCGTGGCACGATCCTACGGCGCCCATCATGC CGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCGAACCAGCGAGGCGTCGACATCGT CTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAACGGACGGATCCTCGTCGTCGGCTT CGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAACATCGCCCTCGTTGGCATCTTTTG GGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGGGTTATGCGCTTGATTTCTGAGGG GAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGTGTCAAGGATGCTCTCTCTGCTCT GGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAAGAGACGAGCCGGTTGTGA |