Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1697
Gene name
LocationContig_173:20497..21692
Strand+
Gene length (bp)1195
Transcript length (bp)768
Coding sequence length (bp)768
Protein length (aa) 256

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00107 ADH_zinc_N Zinc-binding dehydrogenase 4.3E-18 93 197
PF13602 ADH_zinc_N_2 Zinc-binding dehydrogenase 3.4E-14 104 244
PF08240 ADH_N Alcohol dehydrogenase GroES-like domain 3.8E-05 29 89

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A7RK30|QORL2_NEMVE Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1 85 245 4.0E-25
sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 94 246 1.0E-17
sp|Q3UNZ8|QORL2_MOUSE Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 90 246 1.0E-17
sp|B0BNC9|QORL2_RAT Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 94 246 1.0E-17
sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1 88 248 2.0E-09
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|A7RK30|QORL2_NEMVE Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1 85 245 4.0E-25
sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 94 246 1.0E-17
sp|Q3UNZ8|QORL2_MOUSE Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 90 246 1.0E-17
sp|B0BNC9|QORL2_RAT Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 94 246 1.0E-17
sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1 88 248 2.0E-09
sp|Q8BGC4|ZADH2_MOUSE Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=1 SV=1 92 249 8.0E-09
sp|P42865|QOR_LEIAM Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1 83 246 2.0E-08
sp|Q3MIE4|VAT1_RAT Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus GN=Vat1 PE=1 SV=1 88 252 3.0E-08
sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1 95 248 5.0E-08
sp|Q3UNZ8|QORL2_MOUSE Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 21 90 8.0E-08
sp|Q62465|VAT1_MOUSE Synaptic vesicle membrane protein VAT-1 homolog OS=Mus musculus GN=Vat1 PE=1 SV=3 88 252 1.0E-07
sp|P38230|QOR_YEAST Probable quinone oxidoreductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZTA1 PE=1 SV=1 92 247 3.0E-07
sp|Q99536|VAT1_HUMAN Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2 88 252 7.0E-07
sp|B0BNC9|QORL2_RAT Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 28 98 1.0E-06
sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 24 90 2.0E-06
sp|Q8N4Q0|ZADH2_HUMAN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1 92 247 2.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1697
MRAIVINKYVEKPSDLTATTAPDPSPKPGEYTIQIHAAAANFFDILQIQGRYQTQPPFPWVAGVEFAGTVLSVPP
SPSPSSFQVGDRVFGGTQDRKLAVARSYGAHHAVSYTSPDWPSRVKQLTPNQRGVDIVFDPVGLVDASTKCTAWN
GRILVVGFAAGAIEKVPVNKVLLKNIALVGIFWGAYAVNQPEVVPQVWHGVMRLISEGKLRPTVYQDDGFAGLDS
VKDALSALASRRTWGKVVITIPPPQETSRL*
Coding >Ophun1|1697
ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCC
CCCAAGCCAGGAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGC
CGATACCAAACCCAACCCCCCTTCCCCTGGGTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCC
TCACCCTCACCGTCGAGCTTTCAAGTCGGAGATCGCGTCTTTGGCGGCACGCAGGACCGCAAACTCGCCGTGGCA
CGATCCTACGGCGCCCATCATGCCGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCG
AACCAGCGAGGCGTCGACATCGTCTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAAC
GGACGGATCCTCGTCGTCGGCTTCGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAAC
ATCGCCCTCGTTGGCATCTTTTGGGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGG
GTTATGCGCTTGATTTCTGAGGGGAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGT
GTCAAGGATGCTCTCTCTGCTCTGGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAA
GAGACGAGCCGGTTGTGA
Transcript >Ophun1|1697
ATGCGCGCAATCGTCATAAACAAATACGTCGAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCC
CCCAAGCCAGGAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGC
CGATACCAAACCCAACCCCCCTTCCCCTGGGTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCC
TCACCCTCACCGTCGAGCTTTCAAGTCGGAGATCGCGTCTTTGGCGGCACGCAGGACCGCAAACTCGCCGTGGCA
CGATCCTACGGCGCCCATCATGCCGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCG
AACCAGCGAGGCGTCGACATCGTCTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAAC
GGACGGATCCTCGTCGTCGGCTTCGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAAC
ATCGCCCTCGTTGGCATCTTTTGGGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGG
GTTATGCGCTTGATTTCTGAGGGGAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGT
GTCAAGGATGCTCTCTCTGCTCTGGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAA
GAGACGAGCCGGTTGTGA
Gene >Ophun1|1697
ATGCGCGCAATCGTCATAAACAAATACGTCGAGGTCCGTCCCCTCCTTGCAACCTCGCCAGAGACATCACACCCA
AACAGACAACCAACACCATACAGAAACCCTCGGACCTAACGGCAACAACAGCCCCAGACCCATCCCCCAAGCCAG
GAGAATACACGATCCAAATCCACGCCGCAGCCGCAAACTTCTTCGACATCTTGCAAATCCAAGGCCGATACCAAA
CCCAACCCCGTTACTCTTCCCCCTCCTCACCCCCTTCACCACAGCCAGCTAACGACATGAAAAGCCTTCCCCTGG
GTAGCAGGCGTCGAATTCGCCGGCACCGTCCTCTCCGTCCCGCCCTCACCCTCACCGTCGAGCTTTCAAGTCGGA
GATCGCGTCTTTGGCGGCACGCAGGGTGCGTTTGCGGAGAGGGTTTGCGCGAGGGGGGAGACGATTCGCGCTGTT
CCCCCGGGGTGGGACTTTGCGGATGCGGCGGGCTTGTTCGTCACTGCGCCGACGAGTTACGCTGCTCTCGTGACG
AGAGCGGGCGTCAAGAAGGGCGATGTAGTCCTCGTTCACGCCGCAGCAGGCGGAGTCGGACTCGCCGCTGTGCAA
GGTAAACCCTTCCCCCCTTTGCAAGACGAAAACCTCTTAGAACTAAAGAGAAGAAACAAAAGTGGCAAAAGCCTT
CGGAGCAACCGTCATCGCAACAGCCTCATCAGACCGCAAACTCGCCGTGGCACGATCCTACGGCGCCCATCATGC
CGTCTCCTACACCTCCCCAGACTGGCCCTCGCGCGTCAAGCAACTCACCCCGAACCAGCGAGGCGTCGACATCGT
CTTCGACCCCGTAGGCCTCGTCGACGCCTCGACCAAGTGCACAGCGTGGAACGGACGGATCCTCGTCGTCGGCTT
CGCGGCGGGCGCCATTGAGAAAGTGCCGGTCAACAAGGTGCTTCTCAAGAACATCGCCCTCGTTGGCATCTTTTG
GGGCGCGTACGCCGTCAATCAGCCAGAGGTGGTGCCGCAGGTTTGGCATGGGGTTATGCGCTTGATTTCTGAGGG
GAAGCTTAGGCCGACTGTTTATCAGGATGATGGCTTTGCGGGCTTGGATAGTGTCAAGGATGCTCTCTCTGCTCT
GGCTTCGCGTCGGACTTGGGGAAAGGTCGTCATCACCATACCACCACCGCAAGAGACGAGCCGGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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