Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1681
Gene name
LocationContig_172:18178..18972
Strand+
Gene length (bp)794
Transcript length (bp)684
Coding sequence length (bp)684
Protein length (aa) 228

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05008 V-SNARE Vesicle transport v-SNARE protein N-terminus 4.6E-21 22 98
PF12352 V-SNARE_C Snare region anchored in the vesicle membrane C-terminus 1.0E-18 135 200

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P78768|VTI1_SCHPO Vesicle transport v-SNARE protein vti1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vti1 PE=2 SV=2 16 227 3.0E-47
sp|O89116|VTI1A_MOUSE Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus GN=Vti1a PE=1 SV=1 14 222 3.0E-32
sp|Q9JI51|VTI1A_RAT Vesicle transport through interaction with t-SNAREs homolog 1A OS=Rattus norvegicus GN=Vti1a PE=1 SV=1 14 222 3.0E-31
sp|Q96AJ9|VTI1A_HUMAN Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens GN=VTI1A PE=1 SV=2 14 227 5.0E-31
sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1 11 226 4.0E-28
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P78768|VTI1_SCHPO Vesicle transport v-SNARE protein vti1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vti1 PE=2 SV=2 16 227 3.0E-47
sp|O89116|VTI1A_MOUSE Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus GN=Vti1a PE=1 SV=1 14 222 3.0E-32
sp|Q9JI51|VTI1A_RAT Vesicle transport through interaction with t-SNAREs homolog 1A OS=Rattus norvegicus GN=Vti1a PE=1 SV=1 14 222 3.0E-31
sp|Q96AJ9|VTI1A_HUMAN Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens GN=VTI1A PE=1 SV=2 14 227 5.0E-31
sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1 11 226 4.0E-28
sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3 11 226 5.0E-26
sp|Q04338|VTI1_YEAST t-SNARE VTI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTI1 PE=1 SV=3 11 227 5.0E-24
sp|Q9SEL6|VTI11_ARATH Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2 11 205 5.0E-21
sp|Q54CK6|VTI1A_DICDI Vesicle transport through interaction with t-SNAREs homolog 1A OS=Dictyostelium discoideum GN=vti1A PE=1 SV=1 12 205 2.0E-17
sp|P58200|VTI1B_RAT Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus GN=Vti1b PE=1 SV=2 28 226 9.0E-17
sp|O88384|VTI1B_MOUSE Vesicle transport through interaction with t-SNAREs homolog 1B OS=Mus musculus GN=Vti1b PE=1 SV=1 28 226 2.0E-16
sp|Q2KIU0|VTI1B_BOVIN Vesicle transport through interaction with t-SNAREs homolog 1B OS=Bos taurus GN=VTI1B PE=2 SV=1 28 226 4.0E-16
sp|Q9UEU0|VTI1B_HUMAN Vesicle transport through interaction with t-SNAREs homolog 1B OS=Homo sapiens GN=VTI1B PE=1 SV=3 28 204 2.0E-13
[Show less]

GO

GO Term Description Terminal node
GO:0006886 intracellular protein transport Yes
GO:0016020 membrane Yes
GO:0006810 transport No
GO:0071702 organic substance transport No
GO:0009987 cellular process No
GO:0008104 protein localization No
GO:0046907 intracellular transport No
GO:0051234 establishment of localization No
GO:0051649 establishment of localization in cell No
GO:0071705 nitrogen compound transport No
GO:0033036 macromolecule localization No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0070727 cellular macromolecule localization No
GO:0005575 cellular_component No
GO:0015031 protein transport No
GO:0045184 establishment of protein localization No
GO:0008150 biological_process No
GO:0051641 cellular localization No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 201 223 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5503
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4357
Ophiocordyceps australis map64 (Brazil) OphauB2|6114
Ophiocordyceps camponoti-floridani Ophcf2|05829
Ophiocordyceps camponoti-rufipedis Ophun1|1681 (this protein)
Ophiocordyceps kimflemingae Ophio5|4921
Ophiocordyceps subramaniannii Hirsu2|6666

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1681
MANPLDTDVGSELFGSYEAELKLVQADLSQKLDQIPELSGEPRKSFISQAERALEEADELLGQMRLEKQNIPTAS
RAKANQRFRNYESDVDASRRKLTSLSSDRSALFGSRYRDEPAGASDAHHEQRQQLLSGSDRLDRSTQRLKASQAL
ANETEAIGADTLANLHGQREMIQHTHDRLLSSEGYVDRSVKTLRGMARRMATNRLITIAIITVLVILILAVIISK
FR*
Coding >Ophun1|1681
ATGGCCAACCCTCTCGATACCGACGTCGGCTCCGAGCTGTTTGGCTCTTACGAAGCCGAACTCAAGCTCGTCCAG
GCCGATCTGTCGCAGAAGCTGGACCAAATCCCTGAACTGTCGGGCGAGCCTCGCAAGTCCTTCATCAGCCAGGCC
GAGAGGGCTCTTGAGGAGGCGGACGAACTGTTGGGCCAGATGCGTCTCGAGAAGCAGAATATACCCACAGCCTCT
CGCGCCAAGGCAAACCAGCGCTTCCGCAACTACGAATCCGACGTCGACGCCAGCAGACGCAAGCTAACATCCCTC
TCTTCCGACCGCTCCGCCCTCTTCGGGTCGCGCTACCGGGACGAGCCAGCCGGCGCATCAGATGCCCATCATGAA
CAGCGTCAGCAGCTCTTGTCCGGTTCAGACCGGCTCGATCGGAGCACGCAGCGGTTAAAGGCCAGCCAGGCGCTC
GCCAACGAAACCGAAGCCATCGGCGCCGATACTCTTGCAAACCTGCACGGTCAGCGCGAGATGATCCAGCATACC
CACGACCGGCTCCTGAGCAGCGAGGGCTACGTCGACAGGAGTGTCAAGACGTTGCGTGGCATGGCACGGAGGATG
GCCACGAACCGCCTGATTACCATTGCCATCATCACTGTTCTCGTCATCCTCATCTTGGCCGTCATAATCAGCAAA
TTCAGGTGA
Transcript >Ophun1|1681
ATGGCCAACCCTCTCGATACCGACGTCGGCTCCGAGCTGTTTGGCTCTTACGAAGCCGAACTCAAGCTCGTCCAG
GCCGATCTGTCGCAGAAGCTGGACCAAATCCCTGAACTGTCGGGCGAGCCTCGCAAGTCCTTCATCAGCCAGGCC
GAGAGGGCTCTTGAGGAGGCGGACGAACTGTTGGGCCAGATGCGTCTCGAGAAGCAGAATATACCCACAGCCTCT
CGCGCCAAGGCAAACCAGCGCTTCCGCAACTACGAATCCGACGTCGACGCCAGCAGACGCAAGCTAACATCCCTC
TCTTCCGACCGCTCCGCCCTCTTCGGGTCGCGCTACCGGGACGAGCCAGCCGGCGCATCAGATGCCCATCATGAA
CAGCGTCAGCAGCTCTTGTCCGGTTCAGACCGGCTCGATCGGAGCACGCAGCGGTTAAAGGCCAGCCAGGCGCTC
GCCAACGAAACCGAAGCCATCGGCGCCGATACTCTTGCAAACCTGCACGGTCAGCGCGAGATGATCCAGCATACC
CACGACCGGCTCCTGAGCAGCGAGGGCTACGTCGACAGGAGTGTCAAGACGTTGCGTGGCATGGCACGGAGGATG
GCCACGAACCGCCTGATTACCATTGCCATCATCACTGTTCTCGTCATCCTCATCTTGGCCGTCATAATCAGCAAA
TTCAGGTGA
Gene >Ophun1|1681
ATGGCCAACCCTCTCGATACCGACGTCGGCTCCGAGCTGTTTGGCTCTTACGAAGCCGAACTCAAGCTCGTCCAG
GCCGATCTGTCGCAGAAGCTGGACCAAATCCCTGAACTGTCGGGCGAGCCTCGCAAGTCCTTCATCAGCCAGGCC
GAGAGGGCTCTTGAGGAGGCGGACGAACTGGTATGCCGACGGCCGTCTTTACATTTCGCGCAATACTCGCTAACT
CCCCTTTGCAGTTGGGCCAGATGCGTCTCGAGAAGCAGAATATACCCACAGCCTCTCGCGCCAAGGCAAACCAGC
GCTTCCGCAACTACGAATCCGACGTCGACGCCAGCAGACGCAAGCTAACATCCCTCTCTTCCGACCGCTCCGCCC
TCTTCGGGTCGCGCTACCGGGACGAGCCAGCCGGCGCATCAGATGCCCATCATGAACAGCGTCAGCAGCTCTTGT
CCGGTTCAGACCGGCTCGATCGGAGCACGCAGCGGTTAAAGGCCAGCCAGGCGCTCGCCAACGAAACCGAAGCCA
TCGGCGCCGATACTCTTGCAAACCTGCACGGTCAGCGCGAGATGATCCAGCATACCCACGACCGGCTCCTGAGCA
GCGAGGGCTACGTCGACAGGAGTGTCAAGACGTTGCGTGGCATGGCACGGAGGTAAGAGGTGCGCCGAGCAGCAG
TCTGGACATCACTGCTGACACGAAGGCGAAGGATGGCCACGAACCGCCTGATTACCATTGCCATCATCACTGTTC
TCGTCATCCTCATCTTGGCCGTCATAATCAGCAAATTCAGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail