Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1674
Gene name
LocationContig_1717:787..1411
Strand-
Gene length (bp)624
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07264 EI24 Etoposide-induced protein 2.4 (EI24) 2.6E-11 17 98

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q08219|RRT8_YEAST Outer spore wall protein RRT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRT8 PE=1 SV=2 29 113 1.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 78 100 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1674
MQRLGKTLSSPFERFSLTALIRYLIYLPLNFIPLVGTAVFLFLQGRNRGRLVHGRYFQLKMWSASQRSHWLEEHI
GPYTAFGLVATLLEMIPLASIFFTFSNTVGAALWAADMEALDVSMTDETSPTLRKRAAKAE*
Coding >Ophun1|1674
ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT
TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG
TTGGTCCATGGCAGGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATC
GGCCCTTATACCGCTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT
AGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCC
CCAACACTGAGGAAGAGAGCAGCCAAGGCCGAGTGA
Transcript >Ophun1|1674
ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT
TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG
TTGGTCCATGGCAGGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATC
GGCCCTTATACCGCTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT
AGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCC
CCAACACTGAGGAAGAGAGCAGCCAAGGCCGAGTGA
Gene >Ophun1|1674
ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT
TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG
TTGGTCCATGGCAGGGTGAGTTGAACGCCGATATGCCCTCGTTTGATAGGACCGACACTTACATCCATGCTTCCT
GCAGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATCGGCCCTTATAC
CGCGTAGGTTCCAACCTCCCGGTAACGGAGATTCTGCAGACACCCGGTGGAGGAGCATGGACGGCTCGCTAACGT
GCATGACGTCTCAGTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT
AGCAACACCGGTAAGCTGCCGTCATCGTTTGGGCTGTTTGATCTGAGTCCAGCTTGGCTGACCATGGTACAAGTG
GGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCCCCAACACTGAGG
AAGAGAGCAGCCAAGGCCGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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