Protein ID | Ophun1|1674 |
Gene name | |
Location | Contig_1717:787..1411 |
Strand | - |
Gene length (bp) | 624 |
Transcript length (bp) | 411 |
Coding sequence length (bp) | 411 |
Protein length (aa) | 137 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07264 | EI24 | Etoposide-induced protein 2.4 (EI24) | 2.6E-11 | 17 | 98 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q08219|RRT8_YEAST | Outer spore wall protein RRT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRT8 PE=1 SV=2 | 29 | 113 | 1.0E-08 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 78 | 100 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 2870 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1674 MQRLGKTLSSPFERFSLTALIRYLIYLPLNFIPLVGTAVFLFLQGRNRGRLVHGRYFQLKMWSASQRSHWLEEHI GPYTAFGLVATLLEMIPLASIFFTFSNTVGAALWAADMEALDVSMTDETSPTLRKRAAKAE* |
Coding | >Ophun1|1674 ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG TTGGTCCATGGCAGGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATC GGCCCTTATACCGCTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT AGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCC CCAACACTGAGGAAGAGAGCAGCCAAGGCCGAGTGA |
Transcript | >Ophun1|1674 ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG TTGGTCCATGGCAGGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATC GGCCCTTATACCGCTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT AGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCC CCAACACTGAGGAAGAGAGCAGCCAAGGCCGAGTGA |
Gene | >Ophun1|1674 ATGCAGCGGCTCGGCAAGACTCTCAGCAGCCCCTTTGAGCGCTTCAGCCTGACTGCTCTGATCCGCTACCTCATT TACCTGCCACTCAACTTCATCCCCCTCGTCGGCACTGCCGTCTTTCTCTTCCTGCAGGGCCGCAATCGTGGCCGG TTGGTCCATGGCAGGGTGAGTTGAACGCCGATATGCCCTCGTTTGATAGGACCGACACTTACATCCATGCTTCCT GCAGTACTTCCAACTCAAGATGTGGTCGGCCTCGCAGCGGTCGCATTGGCTAGAGGAGCACATCGGCCCTTATAC CGCGTAGGTTCCAACCTCCCGGTAACGGAGATTCTGCAGACACCCGGTGGAGGAGCATGGACGGCTCGCTAACGT GCATGACGTCTCAGTTTCGGCCTGGTGGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTCACCTTT AGCAACACCGGTAAGCTGCCGTCATCGTTTGGGCTGTTTGATCTGAGTCCAGCTTGGCTGACCATGGTACAAGTG GGCGCCGCGCTCTGGGCCGCTGACATGGAAGCTCTCGACGTGTCCATGACGGACGAGACATCCCCAACACTGAGG AAGAGAGCAGCCAAGGCCGAGTGA |