Protein ID | Ophun1|1657 |
Gene name | |
Location | Contig_1703:86..1544 |
Strand | - |
Gene length (bp) | 1458 |
Transcript length (bp) | 1338 |
Coding sequence length (bp) | 1338 |
Protein length (aa) | 446 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00788 | RA | Ras association (RalGDS/AF-6) domain | 1.3E-04 | 37 | 107 |
GO Term | Description | Terminal node |
---|---|---|
GO:0007165 | signal transduction | Yes |
GO:0050789 | regulation of biological process | No |
GO:0065007 | biological regulation | No |
GO:0009987 | cellular process | No |
GO:0050794 | regulation of cellular process | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1657 MGFIEQGGRGIVPRTDAPASAINGGQRRVVVRCHSSTLTLSVTADTTAVDVVRLAAEKTNHPAVSASSYAVVECY FMLGIERRLRRYERVRDILNSWDDDEQNSLLLLPREGGLDLGPVSRSQDAPPGFCFHLYHSARPGKWSKRWVTLQ DGGQMFASKRAEAGPGDKDSVALCHLSDFDVYMPKESEMRRNLKPPKKFCYAIKSQQKTFVFPNGENFVHFFCTD DDGLAARFHDLVRAWRSWYLVNKVLDLGRDEKPSPPPIYNLLSTGGVGAAAKNSNGSDSVPARTPPPPLIDLSGL SKAADHKSLPSRKSSLVPPTPDADREGSFSASGLLGDAYDKRKLDETQDRNEVKAEKPFTEGPSLLNGGVVVVSD KNKAVVVSASDTAKPEPKSWFPSAAEHSARARKENPAPAPVSSLRRPVTADAVGSANRWIPGAASVSPSS* |
Coding | >Ophun1|1657 ATGGGCTTCATCGAGCAGGGCGGGAGGGGCATCGTGCCGCGGACCGATGCCCCGGCCTCGGCCATCAACGGTGGA CAGCGGCGCGTCGTCGTCCGCTGCCACTCGTCCACGCTGACCCTCTCCGTCACCGCCGACACAACCGCCGTCGAC GTCGTCCGTCTGGCCGCCGAAAAGACCAATCACCCTGCCGTCTCGGCCTCGAGCTACGCAGTCGTCGAATGCTAC TTCATGCTCGGCATCGAACGTCGCCTCCGCCGTTACGAACGCGTCCGCGATATCCTCAACTCCTGGGACGACGAC GAGCAGAACTCGCTTCTCCTCCTCCCCCGCGAAGGAGGCCTCGACCTCGGTCCCGTATCGCGATCCCAGGACGCG CCTCCGGGCTTCTGCTTCCATCTCTACCACTCAGCCCGACCCGGCAAGTGGAGCAAGCGCTGGGTAACGCTCCAG GATGGCGGCCAGATGTTCGCCTCCAAGAGGGCCGAGGCCGGGCCGGGAGACAAGGATAGCGTGGCGCTGTGCCAC CTCTCCGACTTTGACGTCTACATGCCCAAGGAGAGCGAGATGCGGCGCAACCTGAAGCCGCCCAAGAAGTTTTGC TACGCCATCAAGAGTCAGCAGAAGACGTTTGTCTTTCCCAACGGCGAGAACTTTGTCCACTTCTTCTGCACTGAC GATGATGGTCTTGCCGCTCGCTTCCATGATCTCGTCCGCGCTTGGAGGAGCTGGTACCTCGTCAACAAGGTGCTC GATCTCGGCCGCGACGAGAAGCCCTCTCCACCGCCCATCTACAACCTCCTATCGACCGGAGGCGTCGGCGCAGCA GCAAAGAACAGCAACGGATCCGACTCGGTCCCGGCCCGCACCCCTCCGCCTCCGCTGATCGACCTCTCAGGCCTC AGCAAAGCAGCGGACCACAAGTCTCTCCCAAGCCGCAAGTCTTCGCTCGTCCCGCCGACGCCAGACGCCGACAGG GAAGGCAGCTTCTCGGCCTCGGGTCTTCTGGGAGACGCCTACGACAAGCGCAAGCTGGACGAGACGCAGGACCGC AACGAGGTCAAGGCAGAGAAGCCCTTCACCGAGGGCCCATCTCTGCTCAACGGCGGCGTCGTCGTCGTATCGGAT AAGAACAAGGCCGTCGTCGTCTCCGCTTCCGACACTGCCAAGCCCGAGCCCAAGTCTTGGTTCCCGTCCGCGGCG GAGCACTCGGCCCGGGCCCGGAAGGAGAATCCGGCTCCGGCTCCGGTGTCGTCGCTTCGACGGCCCGTTACGGCT GATGCTGTCGGCTCGGCGAATCGATGGATTCCCGGAGCCGCCTCGGTTTCGCCATCATCATAA |
Transcript | >Ophun1|1657 ATGGGCTTCATCGAGCAGGGCGGGAGGGGCATCGTGCCGCGGACCGATGCCCCGGCCTCGGCCATCAACGGTGGA CAGCGGCGCGTCGTCGTCCGCTGCCACTCGTCCACGCTGACCCTCTCCGTCACCGCCGACACAACCGCCGTCGAC GTCGTCCGTCTGGCCGCCGAAAAGACCAATCACCCTGCCGTCTCGGCCTCGAGCTACGCAGTCGTCGAATGCTAC TTCATGCTCGGCATCGAACGTCGCCTCCGCCGTTACGAACGCGTCCGCGATATCCTCAACTCCTGGGACGACGAC GAGCAGAACTCGCTTCTCCTCCTCCCCCGCGAAGGAGGCCTCGACCTCGGTCCCGTATCGCGATCCCAGGACGCG CCTCCGGGCTTCTGCTTCCATCTCTACCACTCAGCCCGACCCGGCAAGTGGAGCAAGCGCTGGGTAACGCTCCAG GATGGCGGCCAGATGTTCGCCTCCAAGAGGGCCGAGGCCGGGCCGGGAGACAAGGATAGCGTGGCGCTGTGCCAC CTCTCCGACTTTGACGTCTACATGCCCAAGGAGAGCGAGATGCGGCGCAACCTGAAGCCGCCCAAGAAGTTTTGC TACGCCATCAAGAGTCAGCAGAAGACGTTTGTCTTTCCCAACGGCGAGAACTTTGTCCACTTCTTCTGCACTGAC GATGATGGTCTTGCCGCTCGCTTCCATGATCTCGTCCGCGCTTGGAGGAGCTGGTACCTCGTCAACAAGGTGCTC GATCTCGGCCGCGACGAGAAGCCCTCTCCACCGCCCATCTACAACCTCCTATCGACCGGAGGCGTCGGCGCAGCA GCAAAGAACAGCAACGGATCCGACTCGGTCCCGGCCCGCACCCCTCCGCCTCCGCTGATCGACCTCTCAGGCCTC AGCAAAGCAGCGGACCACAAGTCTCTCCCAAGCCGCAAGTCTTCGCTCGTCCCGCCGACGCCAGACGCCGACAGG GAAGGCAGCTTCTCGGCCTCGGGTCTTCTGGGAGACGCCTACGACAAGCGCAAGCTGGACGAGACGCAGGACCGC AACGAGGTCAAGGCAGAGAAGCCCTTCACCGAGGGCCCATCTCTGCTCAACGGCGGCGTCGTCGTCGTATCGGAT AAGAACAAGGCCGTCGTCGTCTCCGCTTCCGACACTGCCAAGCCCGAGCCCAAGTCTTGGTTCCCGTCCGCGGCG GAGCACTCGGCCCGGGCCCGGAAGGAGAATCCGGCTCCGGCTCCGGTGTCGTCGCTTCGACGGCCCGTTACGGCT GATGCTGTCGGCTCGGCGAATCGATGGATTCCCGGAGCCGCCTCGGTTTCGCCATCATCATAA |
Gene | >Ophun1|1657 ATGGGCTTCATCGAGCAGGGCGGGAGGGGCATCGTGCCGCGGACCGATGCCCCGGCCTCGGCCATCAACGGTGGA CAGCGGGTGAGTATCGCTATTGATTCATCTCAGCTGCAATCTGGCTCACTGTTTCCTTCAGCGCGTCGTCGTCCG CTGCCACTCGTCCACGCTGACCCTCTCCGTCACCGCCGACACAACCGCCGTCGACGTCGTCCGTCTGGCCGCCGA AAAGACCAATCACCCTGCCGTCTCGGCCTCGAGCTACGCAGTCGTCGAATGCTACTTCATGCTCGGCATCGAACG TCGCCTCCGCCGTTACGAACGCGTCCGCGATATCCTCAACTCCTGGGACGACGACGAGCAGAACTCGCTTCTCCT CCTCCCCCGCGAAGGAGGCCTCGACCTCGGTCCCGTATCGCGATCCCAGGACGCGCCTCCGGGCTTCTGCTTCCA TCTCTACCACTCAGCCCGACCCGGCAAGTGGAGCAAGCGCTGGGTAACGCTCCAGGATGGCGGCCAGATGTTCGC CTCCAAGAGGGCCGAGGCCGGGCCGGGAGACAAGGATAGCGTGGCGCTGTGCCACCTCTCCGACTTTGACGTCTA CATGCCCAAGGAGAGCGAGATGCGGCGCAACCTGAAGCCGCCCAAGAAGTTTTGCTACGCCATCAAGAGTCAGCA GAAGACGTTTGTCTTTCCCAACGGCGAGAACTTTGTCCACTTCTTCTGCACTGACGATGATGGTCTTGCCGCTCG CTTCCATGATCTCGTCCGCGCTTGGAGGAGCTGGTACCTCGTCAACAAGGTGCTCGATCTCGGCCGCGACGAGAA GCCCTCTCCACCGCCCATCTACAACCTCCTATCGACCGGAGGCGTCGGCGCAGCAGCAAAGAACAGCAACGGATC CGACTCGGTCCCGGCCCGCACCCCTCCGCCTCCGCTGATCGACCTCTCAGGCCTCAGCAAAGCAGCGGACCACAA GTCTCTCCCAAGCCGCAAGTCTTCGCTCGTCCCGCCGACGCCAGACGCCGACAGGGAAGGCAGCTTCTCGGCCTC GGGTCTTCTGGGAGACGCCTACGACAAGCGCAAGCTGGACGAGACGCAGGACCGCAACGAGGTCAAGGCAGAGAA GCCCTTCACCGAGGGCCCATCTCTGCTCAACGGCGGCGTCGTCGTCGTATCGGATAAGAACAAGGCCGTCGTCGT CTCCGCTTCCGACACTGCCAAGCCCGAGCCCAAGTCTTGGTTCCCGTCCGCGGCGGAGCACTCGGCCCGGGCCCG GAAGGAGAATCCGGCTCCGGCTCCGGTGTCGTCGCTTCGACGGCCCGTTACGGCTGATGCTGTCGGCTCGGCGAA TCGTGGCGGGGATCATAAGCATGCTCCGCCGCCGCCGCCGCCGCCGCCGCTGCTTAGCTTTGCCAAGGATGGATT CCCGGAGCCGCCTCGGTTTCGCCATCATCATAA |