Protein ID | Ophun1|1652 |
Gene name | |
Location | Contig_170:23445..25701 |
Strand | - |
Gene length (bp) | 2256 |
Transcript length (bp) | 1989 |
Coding sequence length (bp) | 1989 |
Protein length (aa) | 663 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 3.2E-12 | 42 | 117 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 29 | 124 | 1.0E-07 |
sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 29 | 124 | 1.0E-07 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 29 | 138 | 3.0E-07 |
sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 29 | 138 | 4.0E-07 |
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 37 | 120 | 2.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1652 MPSNHADQVRVDLTPTSRASEASASNLARHVVLTRDSPSLQIGRMSQRNPDLRASSANAWFESAVMSRHHAKLHF DADQTTLSIEDTQSLHGTFHNGTRLESGMQSQLHSGDELCFGIQVDRHTDTFPPCAMTVTFEFDEANSQPRQNPV VYKVPDDTDVEDTSDDDKDEEDEDEDAEDSSICSSIHVLRENRLHPAEAFLIRDTVAIDLTSDANTPENQASDCE VLEPNYQAQDAPEDHHVIPETVQHGGLEPAEDVWQPVSPVSHSVDNHQGAGAHVGPRPRADGIPGAGSDEWEHGS TTEQCRVASARPCTLPASWETQGSSDGLESDAGVAFCLNPVSSNPPPRSTIPAPKRFDLANLLSPSNQASSSFCD PTRTIVSQDMARPECGSPLPSLATARPTLWGSDSPLGFKKQSAQAAAEALGQKAGKPEYFTARLANKRFVEQLCE VAQQLEQTEADSPESSAEEAHNEDVAMENTSDEDQGGHEKDDQGSVSLFALSGENPLIALEDASKNKLLASGERF LLSPPQEPVASRPPVESPELNDLSAHEFELSKMNAEAKSRAQRNDGLDVPGRVEEARQLSETKRSCLKRKAADML ESNPKVGPKASSSSSETRLAARNSMDESRTVKRLRTAAEVLGYAALGGVAVVSALIATAPSL* |
Coding | >Ophun1|1652 ATGCCGTCGAATCACGCGGATCAAGTCCGCGTCGATCTGACCCCAACATCGCGGGCTTCCGAGGCCTCAGCCTCC AACCTCGCCCGTCATGTCGTCTTGACCAGAGATTCCCCCAGCCTGCAAATCGGCCGCATGAGCCAGAGGAACCCC GACCTTAGGGCCTCGTCGGCAAACGCCTGGTTCGAGTCGGCCGTCATGTCTCGTCATCATGCCAAGCTGCACTTT GATGCAGACCAGACGACGCTCTCCATCGAAGATACTCAATCTCTGCACGGCACCTTCCATAATGGCACTCGCCTT GAGTCGGGCATGCAGTCCCAGCTACACTCTGGGGATGAACTCTGCTTCGGAATTCAAGTCGACAGACATACGGAT ACCTTTCCGCCCTGTGCCATGACGGTCACTTTTGAATTTGACGAAGCCAACAGCCAACCTCGGCAAAACCCCGTC GTCTACAAGGTTCCCGATGACACTGACGTCGAGGACACAAGCGATGACGATAAAGACGAAGAGGACGAGGACGAG GACGCAGAGGACTCGAGCATATGCAGCAGCATCCATGTCCTTCGCGAGAACCGCCTTCACCCAGCTGAAGCATTT CTGATACGCGATACTGTGGCCATCGATCTGACGTCCGACGCCAACACGCCTGAAAATCAGGCATCCGACTGCGAG GTCCTGGAACCCAACTACCAAGCCCAAGATGCTCCCGAAGACCACCATGTGATTCCCGAGACGGTGCAGCATGGT GGCCTGGAGCCGGCCGAAGACGTGTGGCAGCCAGTGTCGCCCGTCTCCCACTCGGTCGACAACCATCAGGGTGCT GGTGCTCACGTCGGCCCTCGTCCGCGCGCCGACGGTATTCCTGGCGCCGGATCGGATGAATGGGAACATGGCAGT ACCACTGAGCAGTGCCGCGTTGCATCCGCGCGCCCTTGTACCTTGCCCGCCTCGTGGGAGACGCAGGGATCCTCG GACGGGCTTGAATCAGACGCTGGCGTGGCCTTTTGCCTAAATCCAGTTTCATCGAATCCGCCTCCCAGGTCAACC ATCCCCGCTCCCAAAAGGTTCGATTTGGCAAATCTGTTGTCACCGTCGAACCAAGCGTCATCCAGCTTCTGCGAT CCCACCCGTACAATCGTCTCTCAAGATATGGCACGGCCGGAGTGCGGAAGCCCGCTGCCCTCGTTGGCTACCGCT CGGCCGACTCTTTGGGGAAGCGACTCTCCCCTCGGTTTCAAAAAACAGAGCGCCCAAGCAGCAGCTGAGGCTCTA GGCCAGAAGGCTGGCAAGCCGGAGTATTTCACCGCCCGCCTCGCCAACAAGCGCTTCGTCGAACAATTGTGCGAA GTCGCCCAGCAGCTTGAACAGACGGAGGCTGATTCGCCTGAAAGCTCTGCCGAGGAAGCTCACAACGAGGATGTC GCCATGGAAAATACTAGCGACGAAGATCAAGGCGGCCACGAGAAAGACGACCAGGGTTCCGTTTCGCTATTTGCA CTATCGGGCGAGAACCCTCTCATCGCGTTGGAAGACGCATCCAAGAACAAGCTGCTGGCCTCTGGCGAAAGGTTT CTGCTGTCGCCTCCTCAGGAGCCCGTGGCATCCCGGCCGCCGGTCGAATCGCCCGAGTTGAACGACTTGTCGGCC CACGAGTTTGAACTGAGCAAGATGAACGCGGAAGCCAAGAGCCGGGCCCAACGCAACGATGGCCTTGACGTTCCC GGTCGGGTCGAAGAAGCGCGGCAACTGTCGGAGACCAAGCGATCCTGCCTCAAGCGGAAAGCAGCCGATATGTTG GAGTCGAACCCGAAGGTCGGCCCCAAGGCATCATCGAGCAGCTCAGAGACGAGGCTCGCCGCTCGCAACTCTATG GACGAGTCCCGGACCGTGAAGCGGCTCCGAACAGCAGCCGAGGTGCTGGGATACGCGGCACTGGGCGGTGTGGCG GTGGTGTCGGCTCTGATTGCCACGGCGCCGTCGCTTTAA |
Transcript | >Ophun1|1652 ATGCCGTCGAATCACGCGGATCAAGTCCGCGTCGATCTGACCCCAACATCGCGGGCTTCCGAGGCCTCAGCCTCC AACCTCGCCCGTCATGTCGTCTTGACCAGAGATTCCCCCAGCCTGCAAATCGGCCGCATGAGCCAGAGGAACCCC GACCTTAGGGCCTCGTCGGCAAACGCCTGGTTCGAGTCGGCCGTCATGTCTCGTCATCATGCCAAGCTGCACTTT GATGCAGACCAGACGACGCTCTCCATCGAAGATACTCAATCTCTGCACGGCACCTTCCATAATGGCACTCGCCTT GAGTCGGGCATGCAGTCCCAGCTACACTCTGGGGATGAACTCTGCTTCGGAATTCAAGTCGACAGACATACGGAT ACCTTTCCGCCCTGTGCCATGACGGTCACTTTTGAATTTGACGAAGCCAACAGCCAACCTCGGCAAAACCCCGTC GTCTACAAGGTTCCCGATGACACTGACGTCGAGGACACAAGCGATGACGATAAAGACGAAGAGGACGAGGACGAG GACGCAGAGGACTCGAGCATATGCAGCAGCATCCATGTCCTTCGCGAGAACCGCCTTCACCCAGCTGAAGCATTT CTGATACGCGATACTGTGGCCATCGATCTGACGTCCGACGCCAACACGCCTGAAAATCAGGCATCCGACTGCGAG GTCCTGGAACCCAACTACCAAGCCCAAGATGCTCCCGAAGACCACCATGTGATTCCCGAGACGGTGCAGCATGGT GGCCTGGAGCCGGCCGAAGACGTGTGGCAGCCAGTGTCGCCCGTCTCCCACTCGGTCGACAACCATCAGGGTGCT GGTGCTCACGTCGGCCCTCGTCCGCGCGCCGACGGTATTCCTGGCGCCGGATCGGATGAATGGGAACATGGCAGT ACCACTGAGCAGTGCCGCGTTGCATCCGCGCGCCCTTGTACCTTGCCCGCCTCGTGGGAGACGCAGGGATCCTCG GACGGGCTTGAATCAGACGCTGGCGTGGCCTTTTGCCTAAATCCAGTTTCATCGAATCCGCCTCCCAGGTCAACC ATCCCCGCTCCCAAAAGGTTCGATTTGGCAAATCTGTTGTCACCGTCGAACCAAGCGTCATCCAGCTTCTGCGAT CCCACCCGTACAATCGTCTCTCAAGATATGGCACGGCCGGAGTGCGGAAGCCCGCTGCCCTCGTTGGCTACCGCT CGGCCGACTCTTTGGGGAAGCGACTCTCCCCTCGGTTTCAAAAAACAGAGCGCCCAAGCAGCAGCTGAGGCTCTA GGCCAGAAGGCTGGCAAGCCGGAGTATTTCACCGCCCGCCTCGCCAACAAGCGCTTCGTCGAACAATTGTGCGAA GTCGCCCAGCAGCTTGAACAGACGGAGGCTGATTCGCCTGAAAGCTCTGCCGAGGAAGCTCACAACGAGGATGTC GCCATGGAAAATACTAGCGACGAAGATCAAGGCGGCCACGAGAAAGACGACCAGGGTTCCGTTTCGCTATTTGCA CTATCGGGCGAGAACCCTCTCATCGCGTTGGAAGACGCATCCAAGAACAAGCTGCTGGCCTCTGGCGAAAGGTTT CTGCTGTCGCCTCCTCAGGAGCCCGTGGCATCCCGGCCGCCGGTCGAATCGCCCGAGTTGAACGACTTGTCGGCC CACGAGTTTGAACTGAGCAAGATGAACGCGGAAGCCAAGAGCCGGGCCCAACGCAACGATGGCCTTGACGTTCCC GGTCGGGTCGAAGAAGCGCGGCAACTGTCGGAGACCAAGCGATCCTGCCTCAAGCGGAAAGCAGCCGATATGTTG GAGTCGAACCCGAAGGTCGGCCCCAAGGCATCATCGAGCAGCTCAGAGACGAGGCTCGCCGCTCGCAACTCTATG GACGAGTCCCGGACCGTGAAGCGGCTCCGAACAGCAGCCGAGGTGCTGGGATACGCGGCACTGGGCGGTGTGGCG GTGGTGTCGGCTCTGATTGCCACGGCGCCGTCGCTTTAA |
Gene | >Ophun1|1652 ATGCCGTCGAATCACGCGGATCAAGGTGAGCTTCATCCCGCCACTCTCCCTTCTCCCCTCTCCCCTCTACCCTTC GCTTCCGGCTAATGACGTCGTCCAGTCCGCGTCGATCTGACCCCAACATCGCGGGCTTCCGAGGCCTCAGCCTCC AACCTCGCCCGTCATGTCGTCTTGACCAGAGATTCCCCCAGCCTGCAAATCGGCCGCATGAGCCAGAGGAACCCC GACCTTAGGGCCTCGTCGGCAAACGCCTGGTTCGAGTCGGCCGTCATGTCTCGTCATCATGCCAAGCTGCACTTT GATGCAGACCAGACGGTAGCGATCCCCCTCCCATACCAGAGGCATTTTCTTGGAAATATTTACTGACTCTTACTT GCCTCTTCAGACGCTCTCCATCGAAGATACTCAATCTCTGCACGGCACCTTCCATAATGGCACTCGCCTTGAGTC GGGCATGCAGTCCCAGCTACACTCTGGGGATGAACTCTGCTTCGGAATTCAAGTCGACAGACATACGGATACCTT TCCGCCCTGTGCCATGACGGTCACTTTTGAATTTGACGAAGCCAACAGGTGTGTCCTTCCCTCGTCATCGCCCTT CCATCCCGACTTTACTAATGTCTCGTCTTTCAGCCAACCTCGGCAAAACCCCGTCGTCTACAAGGTTCCCGATGA CACTGACGTCGAGGACACAAGCGATGACGATAAAGACGAAGAGGACGAGGACGAGGACGCAGAGGACTCGAGCAT ATGCAGCAGCATCCATGTCCTTCGCGAGAACCGCCTTCACCCAGCTGAAGCATTTCTGATACGCGATACTGTGGC CATCGATCTGACGTCCGACGCCAACACGCCTGAAAATCAGGCATCCGACTGCGAGGTCCTGGAACCCAACTACCA AGCCCAAGATGCTCCCGAAGACCACCATGTGATTCCCGAGACGGTGCAGCATGGTGGCCTGGAGCCGGCCGAAGA CGTGTGGCAGCCAGTGTCGCCCGTCTCCCACTCGGTCGACAACCATCAGGGTGCTGGTGCTCACGTCGGCCCTCG TCCGCGCGCCGACGGTATTCCTGGCGCCGGATCGGATGAATGGGAACATGGCAGTACCACTGAGCAGTGCCGCGT TGCATCCGCGCGCCCTTGTACCTTGCCCGCCTCGTGGGAGACGCAGGGATCCTCGGACGGGCTTGAATCAGACGC TGGCGTGGCCTTTTGCCTAAATCCAGGTAAGCAGCATAATGTTCCCGACATGGACAAACACATTTTGGCTGACAG TCCGCTGCAATAGTTTCATCGAATCCGCCTCCCAGGTCAACCATCCCCGCTCCCAAAAGGTTCGATTTGGCAAAT CTGTTGTCACCGTCGAACCAAGCGTCATCCAGCTTCTGCGATCCCACCCGTACAATCGTCTCTCAAGATATGGCA CGGCCGGAGTGCGGAAGCCCGCTGCCCTCGTTGGCTACCGCTCGGCCGACTCTTTGGGGAAGCGACTCTCCCCTC GGTTTCAAAAAACAGAGCGCCCAAGCAGCAGCTGAGGCTCTAGGCCAGAAGGCTGGCAAGCCGGAGTATTTCACC GCCCGCCTCGCCAACAAGCGCTTCGTCGAACAATTGTGCGAAGTCGCCCAGCAGCTTGAACAGACGGAGGCTGAT TCGCCTGAAAGCTCTGCCGAGGAAGCTCACAACGAGGATGTCGCCATGGAAAATACTAGCGACGAAGATCAAGGC GGCCACGAGAAAGACGACCAGGGTTCCGTTTCGCTATTTGCACTATCGGGCGAGAACCCTCTCATCGCGTTGGAA GACGCATCCAAGAACAAGCTGCTGGCCTCTGGCGAAAGGTTTCTGCTGTCGCCTCCTCAGGAGCCCGTGGCATCC CGGCCGCCGGTCGAATCGCCCGAGTTGAACGACTTGTCGGCCCACGAGTTTGAACTGAGCAAGATGAACGCGGAA GCCAAGAGCCGGGCCCAACGCAACGATGGCCTTGACGTTCCCGGTCGGGTCGAAGAAGCGCGGCAACTGTCGGAG ACCAAGCGATCCTGCCTCAAGCGGAAAGCAGCCGATATGTTGGAGTCGAACCCGAAGGTCGGCCCCAAGGCATCA TCGAGCAGCTCAGAGACGAGGCTCGCCGCTCGCAACTCTATGGACGAGTCCCGGACCGTGAAGCGGCTCCGAACA GCAGCCGAGGTGCTGGGATACGCGGCACTGGGCGGTGTGGCGGTGGTGTCGGCTCTGATTGCCACGGCGCCGTCG CTTTAA |