Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1650
Gene name
LocationContig_170:20956..21424
Strand+
Gene length (bp)468
Transcript length (bp)414
Coding sequence length (bp)414
Protein length (aa) 138

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10639 TMEM234 Putative transmembrane family 234 1.0E-26 15 124

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q54ZG7|TM234_DICDI Transmembrane protein 234 homolog OS=Dictyostelium discoideum GN=DDB_G0277575 PE=3 SV=1 12 124 5.0E-14
sp|A0NGI1|TM234_ANOGA Transmembrane protein 234 homolog OS=Anopheles gambiae GN=AGAP012180 PE=3 SV=1 9 122 3.0E-12
sp|A7YW81|TM234_BOVIN Transmembrane protein 234 OS=Bos taurus GN=TMEM234 PE=2 SV=1 22 120 2.0E-07
sp|Q8R1E7|TM234_MOUSE Transmembrane protein 234 OS=Mus musculus GN=Tmem234 PE=1 SV=1 22 120 1.0E-06
sp|Q8WY98|TM234_HUMAN Transmembrane protein 234 OS=Homo sapiens GN=TMEM234 PE=1 SV=1 22 114 2.0E-06
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q54ZG7|TM234_DICDI Transmembrane protein 234 homolog OS=Dictyostelium discoideum GN=DDB_G0277575 PE=3 SV=1 12 124 5.0E-14
sp|A0NGI1|TM234_ANOGA Transmembrane protein 234 homolog OS=Anopheles gambiae GN=AGAP012180 PE=3 SV=1 9 122 3.0E-12
sp|A7YW81|TM234_BOVIN Transmembrane protein 234 OS=Bos taurus GN=TMEM234 PE=2 SV=1 22 120 2.0E-07
sp|Q8R1E7|TM234_MOUSE Transmembrane protein 234 OS=Mus musculus GN=Tmem234 PE=1 SV=1 22 120 1.0E-06
sp|Q8WY98|TM234_HUMAN Transmembrane protein 234 OS=Homo sapiens GN=TMEM234 PE=1 SV=1 22 114 2.0E-06
sp|Q5RBQ9|TM234_PONAB Transmembrane protein 234 OS=Pongo abelii GN=TMEM234 PE=2 SV=1 22 108 4.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19
2 68 87 19
3 91 113 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1650
MASSPPPAINYILSFILVGLAWGLTTPFIRRAALRRQPRPALPSDASRGRRLAACCLSVVDFVRDPRYALPLLLN
LSGSVWFFLLVGRAELSLTVPIVNTLAFLFTVLGEWLVEGKVVSKRQLLVLFPPLSSLFADP*
Coding >Ophun1|1650
ATGGCATCCTCCCCGCCCCCAGCCATCAACTACATCCTCTCCTTCATCCTCGTCGGACTCGCCTGGGGCCTGACG
ACGCCCTTCATCCGCCGCGCCGCCCTCCGCCGCCAGCCGCGCCCAGCCCTTCCCTCGGATGCCTCGCGGGGGCGC
CGCCTGGCCGCCTGCTGCCTGAGCGTCGTCGACTTTGTCCGCGATCCGCGGTATGCGCTGCCGCTGCTGTTGAAT
CTCTCCGGCAGTGTGTGGTTCTTTCTGCTGGTTGGTCGTGCTGAGCTGAGCTTGACGGTTCCCATCGTCAATACC
CTCGCTTTTCTCTTCACTGTCTTGGGCGAGTGGCTCGTCGAGGGCAAGGTTGTTAGCAAACGTCAGCTCTTGGTG
CTCTTTCCGCCCCTTTCGTCTCTCTTTGCTGACCCTTGA
Transcript >Ophun1|1650
ATGGCATCCTCCCCGCCCCCAGCCATCAACTACATCCTCTCCTTCATCCTCGTCGGACTCGCCTGGGGCCTGACG
ACGCCCTTCATCCGCCGCGCCGCCCTCCGCCGCCAGCCGCGCCCAGCCCTTCCCTCGGATGCCTCGCGGGGGCGC
CGCCTGGCCGCCTGCTGCCTGAGCGTCGTCGACTTTGTCCGCGATCCGCGGTATGCGCTGCCGCTGCTGTTGAAT
CTCTCCGGCAGTGTGTGGTTCTTTCTGCTGGTTGGTCGTGCTGAGCTGAGCTTGACGGTTCCCATCGTCAATACC
CTCGCTTTTCTCTTCACTGTCTTGGGCGAGTGGCTCGTCGAGGGCAAGGTTGTTAGCAAACGTCAGCTCTTGGTG
CTCTTTCCGCCCCTTTCGTCTCTCTTTGCTGACCCTTGA
Gene >Ophun1|1650
ATGGCATCCTCCCCGCCCCCAGCCATCAACTACATCCTCTCCTTCATCCTCGTCGGACTCGCCTGGGGCCTGACG
ACGCCCTTCATCCGCCGCGCCGCCCTCCGCCGCCAGCCGCGCCCAGCCCTTCCCTCGGATGCCTCGCGGGGGCGC
CGCCTGGCCGCCTGCTGCCTGAGCGTCGTCGACTTTGTCCGCGATCCGCGGTATGCGCTGCCGCTGCTGTTGAAT
CTCTCCGGCAGTGTGTGGTTCTTTCTGCTGGTTGGTCGTGCTGGTGCGTTGTTCGTCACCAGGGACGTCGACGTC
TGCTGATTCCTCGTTGCTGTAGAGCTGAGCTTGACGGTTCCCATCGTCAATACCCTCGCTTTTCTCTTCACTGTC
TTGGGCGAGTGGCTCGTCGAGGGCAAGGTTGTTAGCAAACGTCAGCTCTTGGTGCTCTTTCCGCCCCTTTCGTCT
CTCTTTGCTGACCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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