© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|163 |
| Gene name | |
| Location | Contig_102:28909..29575 |
| Strand | + |
| Gene length (bp) | 666 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04892 | VanZ | VanZ like family | 5.6E-07 | 34 | 110 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13689|YDYA_SCHPO | Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2 | 3 | 129 | 9.0E-25 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 36 | 53 | 17 |
| 3 | 60 | 79 | 19 |
| 4 | 94 | 111 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 4082 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|163 MRIRLPFAGGFVLLLLAAAYAGLSTLQLGHIVNDKILHTVTFFLLTVVFYWIVDTNRRRTLNMTLIVCTLILGVG SEFVQSFLPNDRDFDLYDIVANVVGSLTGLGLCSWYHRRMLERRRKRKSYTAVPDEEGVELSPDYEAGLTDGPAQ PRTLEEEVDNWNENAADDWDGDIVAEASPPIAKAKEPDGHDPAEAKKRTD* |
| Coding | >Ophun1|163 ATGCGCATACGCTTGCCCTTTGCTGGCGGCTTCGTACTGTTGCTGCTGGCTGCCGCCTACGCCGGTCTCTCTACT CTTCAGCTCGGCCACATCGTCAACGACAAGATCTTGCATACCGTTACCTTCTTCCTCCTCACCGTCGTCTTCTAC TGGATCGTCGATACAAACCGCCGGCGCACGCTCAACATGACGCTCATCGTCTGTACTCTGATTCTCGGAGTCGGC TCCGAGTTCGTTCAAAGCTTCCTCCCCAACGACCGCGACTTCGACCTCTACGATATCGTCGCCAACGTGGTGGGC AGTCTTACTGGTCTCGGTCTCTGCTCGTGGTATCATAGACGCATGCTTGAGCGGCGCAGGAAGCGCAAATCATAC ACGGCCGTTCCCGACGAGGAGGGCGTCGAACTGTCTCCGGACTACGAGGCGGGCTTGACCGACGGTCCGGCCCAG CCAAGGACACTGGAGGAAGAGGTTGATAATTGGAACGAAAACGCCGCCGACGACTGGGACGGTGACATTGTCGCC GAGGCCTCCCCGCCCATCGCCAAGGCCAAGGAACCCGATGGTCACGATCCGGCTGAAGCCAAGAAGCGGACGGAC TGA |
| Transcript | >Ophun1|163 ATGCGCATACGCTTGCCCTTTGCTGGCGGCTTCGTACTGTTGCTGCTGGCTGCCGCCTACGCCGGTCTCTCTACT CTTCAGCTCGGCCACATCGTCAACGACAAGATCTTGCATACCGTTACCTTCTTCCTCCTCACCGTCGTCTTCTAC TGGATCGTCGATACAAACCGCCGGCGCACGCTCAACATGACGCTCATCGTCTGTACTCTGATTCTCGGAGTCGGC TCCGAGTTCGTTCAAAGCTTCCTCCCCAACGACCGCGACTTCGACCTCTACGATATCGTCGCCAACGTGGTGGGC AGTCTTACTGGTCTCGGTCTCTGCTCGTGGTATCATAGACGCATGCTTGAGCGGCGCAGGAAGCGCAAATCATAC ACGGCCGTTCCCGACGAGGAGGGCGTCGAACTGTCTCCGGACTACGAGGCGGGCTTGACCGACGGTCCGGCCCAG CCAAGGACACTGGAGGAAGAGGTTGATAATTGGAACGAAAACGCCGCCGACGACTGGGACGGTGACATTGTCGCC GAGGCCTCCCCGCCCATCGCCAAGGCCAAGGAACCCGATGGTCACGATCCGGCTGAAGCCAAGAAGCGGACGGAC TGA |
| Gene | >Ophun1|163 ATGCGCATACGCTTGCCCTTTGCTGGTCAGTCCTGAGTGTCGCTTTTTCGAGAGCTTCAGCCTTACTGATGGCGG CGTCTCCGCTCAGGCGGCTTCGTACTGTTGCTGCTGGCTGCCGCCTACGCCGGTCTCTCTACTCTTCAGCTCGGC CACATCGTCAACGACAAGATCTTGCATACCGTTACCTTCTTCCTCCTCACCGTCGTCTTCTACTGGATCGTCGAT ACAAACCGCCGGCGCACGCTCAACATGACGCTCATCGTCTGTACTCTGATTCTCGGAGTCGGCTCCGAGTTCGTT CAAAGCTTCCTCCCCAACGACCGCGACTTCGACCTCTACGATATCGTCGCCAACGTGGTGGGCAGTCTTACTGGT CTCGGTCTCTGCTCGTGGTATCATAGACGCATGCTTGAGCGGCGCAGGAAGCGCAAATCATACACGGCCGTTCCC GACGAGGAGGGCGTCGAACTGTCTCCGGACTACGAGGCGGGCTTGACCGACGGTCCGGCCCAGCCAAGGACACTG GAGGAAGAGGTTGATAATTGGAACGAAAACGCCGCCGACGACTGGGACGGTGACATTGTCGCCGAGGCCTCCCCG CCCATCGCCAAGGCCAAGGAACCCGATGGTCACGATCCGGCTGAAGCCAAGAAGCGGACGGACTGA |