© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1599 |
| Gene name | |
| Location | Contig_169:12631..13197 |
| Strand | + |
| Gene length (bp) | 566 |
| Transcript length (bp) | 345 |
| Coding sequence length (bp) | 345 |
| Protein length (aa) | 115 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10247 | Romo1 | Reactive mitochondrial oxygen species modulator 1 | 3.4E-28 | 16 | 81 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02889|MGR2_YEAST | Protein MGR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGR2 PE=1 SV=1 | 1 | 98 | 9.0E-23 |
| sp|P79082|MGR2_SCHPO | Protein mgr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mgr2 PE=2 SV=1 | 15 | 85 | 2.0E-18 |
| sp|Q6NYD1|ROMO1_DANRE | Reactive oxygen species modulator 1 OS=Danio rerio GN=romo1 PE=3 SV=1 | 3 | 81 | 6.0E-11 |
| sp|A4QNF3|ROMO1_XENTR | Reactive oxygen species modulator 1 OS=Xenopus tropicalis GN=romo1 PE=3 SV=1 | 11 | 81 | 2.0E-10 |
| sp|Q4V7T9|ROMO1_XENLA | Reactive oxygen species modulator 1 OS=Xenopus laevis GN=romo1 PE=3 SV=1 | 11 | 81 | 7.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02889|MGR2_YEAST | Protein MGR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGR2 PE=1 SV=1 | 1 | 98 | 9.0E-23 |
| sp|P79082|MGR2_SCHPO | Protein mgr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mgr2 PE=2 SV=1 | 15 | 85 | 2.0E-18 |
| sp|Q6NYD1|ROMO1_DANRE | Reactive oxygen species modulator 1 OS=Danio rerio GN=romo1 PE=3 SV=1 | 3 | 81 | 6.0E-11 |
| sp|A4QNF3|ROMO1_XENTR | Reactive oxygen species modulator 1 OS=Xenopus tropicalis GN=romo1 PE=3 SV=1 | 11 | 81 | 2.0E-10 |
| sp|Q4V7T9|ROMO1_XENLA | Reactive oxygen species modulator 1 OS=Xenopus laevis GN=romo1 PE=3 SV=1 | 11 | 81 | 7.0E-10 |
| sp|P60603|ROMO1_MOUSE | Reactive oxygen species modulator 1 OS=Mus musculus GN=Romo1 PE=2 SV=1 | 11 | 81 | 1.0E-09 |
| sp|P60602|ROMO1_HUMAN | Reactive oxygen species modulator 1 OS=Homo sapiens GN=ROMO1 PE=1 SV=1 | 11 | 81 | 1.0E-09 |
| sp|Q3SZV8|ROMO1_BOVIN | Reactive oxygen species modulator 1 OS=Bos taurus GN=ROMO1 PE=3 SV=1 | 11 | 81 | 1.0E-09 |
| sp|A1XQR6|ROMO1_PIG | Reactive oxygen species modulator 1 OS=Sus scrofa GN=ROMO1 PE=3 SV=1 | 11 | 81 | 8.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 57 | 79 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1599 MPPVPAASSGGHHGPSNFDKLKMGAMMGGTVGVIIGFIFGTVNIFRYGAGSQGVMRTLGQYMGASGATFGFFMSI GSVIRSDADPQKVHELYMRAHTRQPISMLANSGWRRSRS* |
| Coding | >Ophun1|1599 ATGCCTCCTGTCCCGGCCGCCTCCTCAGGCGGCCATCACGGCCCTTCCAACTTTGACAAGCTCAAGATGGGCGCC ATGATGGGCGGAACCGTTGGCGTCATCATCGGCTTTATCTTCGGAACCGTCAACATCTTCCGTTACGGCGCGGGC TCGCAGGGCGTCATGAGGACGTTGGGCCAGTACATGGGTGCTTCTGGAGCTACTTTCGGTTTCTTCATGTCGATT GGCAGCGTCATCCGATCCGATGCCGATCCGCAAAAGGTGCACGAGCTGTACATGCGAGCGCATACTCGGCAGCCC ATTTCCATGCTGGCAAACTCCGGCTGGCGAAGAAGCAGAAGTTGA |
| Transcript | >Ophun1|1599 ATGCCTCCTGTCCCGGCCGCCTCCTCAGGCGGCCATCACGGCCCTTCCAACTTTGACAAGCTCAAGATGGGCGCC ATGATGGGCGGAACCGTTGGCGTCATCATCGGCTTTATCTTCGGAACCGTCAACATCTTCCGTTACGGCGCGGGC TCGCAGGGCGTCATGAGGACGTTGGGCCAGTACATGGGTGCTTCTGGAGCTACTTTCGGTTTCTTCATGTCGATT GGCAGCGTCATCCGATCCGATGCCGATCCGCAAAAGGTGCACGAGCTGTACATGCGAGCGCATACTCGGCAGCCC ATTTCCATGCTGGCAAACTCCGGCTGGCGAAGAAGCAGAAGTTGA |
| Gene | >Ophun1|1599 ATGCCTCCTGTCCCGGCCGCCTCCTCAGGCGGCCATCACGGCCCTTCCAACTTTGACAAGCGTACGTCTGCGCTT GCTGCCGGCGTTGGGCCGCAACACTGACGTCGGACCGCAGTCAAGATGGGCGCCATGATGGGCGGAAGTATGCCT CGACCGAAGCCGTCTCGTCCGTCGAACGCGTCTCTGACCCTTTGATAGCCGTTGGCGTCATCATCGGCTTTATCT TCGGTAATCCGCCCTCGGCCGACCGAATCTTGTCCCGCGCTCACCTGACGCAGGAACCGTCAACATCTTCCGTTA CGGCGCGGGCTCGCAGGGCGTCATGAGGACGTTGGGCCAGTACATGGGTGCTTCTGGAGCTACTTTCGGGTCCGT CGGCCTCTGGATTTATGGTCTTCCCTTCTCTGCTGACGTTGGCCTTGTTGCCCAGTTTCTTCATGTCGATTGGCA GCGTCATCCGATCCGATGCCGATCCGCAAAAGGTGCACGAGCTGTACATGCGAGCGCATACTCGGCAGCCCATTT CCATGCTGGCAAACTCCGGCTGGCGAAGAAGCAGAAGTTGA |