Protein ID | Ophun1|1598 |
Gene name | |
Location | Contig_169:9472..12421 |
Strand | - |
Gene length (bp) | 2949 |
Transcript length (bp) | 2490 |
Coding sequence length (bp) | 2490 |
Protein length (aa) | 830 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 1.4E-16 | 258 | 335 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 233 | 355 | 2.0E-29 |
sp|Q03944|VPS64_YEAST | Vacuolar protein sorting-associated protein 64 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1 SV=1 | 233 | 361 | 8.0E-20 |
sp|Q06001|FAR10_YEAST | Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAR10 PE=1 SV=1 | 233 | 356 | 5.0E-19 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 252 | 355 | 7.0E-14 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 252 | 355 | 9.0E-14 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 233 | 355 | 2.0E-29 |
sp|Q03944|VPS64_YEAST | Vacuolar protein sorting-associated protein 64 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1 SV=1 | 233 | 361 | 8.0E-20 |
sp|Q06001|FAR10_YEAST | Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAR10 PE=1 SV=1 | 233 | 356 | 5.0E-19 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 252 | 355 | 7.0E-14 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 252 | 355 | 9.0E-14 |
sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 252 | 355 | 1.0E-13 |
sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 252 | 355 | 5.0E-13 |
sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 259 | 337 | 3.0E-08 |
sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 276 | 338 | 1.0E-06 |
sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 276 | 338 | 1.0E-06 |
sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 276 | 356 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 799 | 821 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|1598 MVNTSLPSPSREKCKNRQHHDLLRRRPRRASSDARILPEATKQVGVEPLPRRRRLVSTEHCTNVASNPSWAAPSL RRGHETVPRHSPLSFHGFRGNSPMNPDQVRAMFAPRKQLTRSSSSSSISSNSSNTTIATNGSQPNGTPLSANTDL SPTSDMSQWSNRPATGFKRPPPKHTWLAKSDSQPDLTRGSVGRPGGMVNHHASLQLTPGQPSMAQQTGMRALGPD QFPPGQPVLFLLSLNGTFERKTIAVPFAPESLRIGRQTNQKTVPTPTNGFFDSKVLSRQHAEIYAERNGKVYIRD VKSSNGTFVNGTRLSQENRESDPHELQTADHLELGIDIVSEDQKTVVHHKVAAKVEHAGFLSNTSNVLDMNFGDL DPANGTMLVPNCTLQMRGRAGNNASVGNSGGRMVAGGGMMASQNNALAQQRPFFVSPIATEQILKRLTNEMRNVR LQSQDLNRMNVFVNRLLSKDDVKDLEKPDMPEPSKPMMNGSGIPFRTDGKNRFSDPPAPPPQQPLPEKPDALSLK RGPGERPRISTSSPASLRQDNLGQVIQLTEALNNAKQELEFQSIRMHELEMTLGKEREARELAEDLARRFEESAN DQTISGNPTNGFLGSIYDDPKPASDASETRIGGIETEEESYMADDATLDAAPALQSRIDTMERQMRNLREQMEMW KQRCETAETERDEGRRSLADMVVRLRAEEAKRHGETSRGQSRRGRSGLRDTPGDEAKSSPGVDGAGPETEPGAAA DVMSQGDARWGCSSAARGGGDGGDGGDGNDGTGQATADGLRERYVEAALPYASMLGVVLIGMSLMAYINGWQPPS PQME* |
Coding | >Ophun1|1598 ATGGTCAATACCTCGCTGCCCTCTCCATCTCGTGAAAAGTGCAAGAATCGCCAGCACCACGACCTCCTTCGCCGT CGGCCTCGACGAGCCTCTTCCGACGCCCGCATCCTCCCCGAGGCTACGAAGCAGGTAGGCGTCGAGCCGCTGCCC AGACGCAGGCGCTTGGTCTCCACCGAGCACTGTACGAACGTGGCTTCAAACCCCTCCTGGGCCGCTCCCTCGCTG CGTCGCGGCCACGAGACGGTGCCAAGGCATTCGCCGCTGTCATTTCACGGATTCCGCGGCAACAGCCCCATGAAC CCCGACCAAGTCAGAGCCATGTTTGCCCCACGCAAGCAACTCACCCGATCCTCGTCGTCATCGTCCATCTCGTCC AACTCGTCAAACACCACCATCGCCACCAACGGCTCCCAACCGAATGGTACTCCTCTATCCGCCAATACGGACTTG AGTCCCACCTCCGACATGAGTCAATGGTCCAACCGCCCTGCTACTGGCTTCAAGCGGCCGCCGCCCAAGCACACA TGGCTCGCCAAGAGCGACTCGCAGCCGGACCTGACGAGAGGCTCGGTCGGTCGCCCCGGTGGCATGGTAAACCAC CATGCGTCACTGCAGCTGACGCCCGGTCAGCCTTCGATGGCCCAGCAGACGGGCATGCGCGCCCTGGGGCCCGAT CAGTTCCCCCCCGGCCAGCCGGTGCTATTTCTTCTCTCGCTCAACGGAACATTCGAGAGAAAGACCATCGCCGTG CCCTTTGCCCCCGAAAGCCTTCGTATCGGCCGGCAGACGAACCAGAAGACGGTGCCGACTCCCACCAACGGCTTC TTCGATAGCAAAGTGCTGTCTAGGCAACACGCTGAGATTTACGCCGAGCGCAACGGCAAGGTGTATATCCGTGAC GTCAAATCGTCCAACGGCACTTTTGTCAACGGCACTCGCCTCTCTCAGGAGAACCGCGAGTCGGATCCTCACGAG CTGCAGACGGCCGACCACCTCGAACTTGGCATCGACATTGTCAGCGAAGACCAGAAGACGGTCGTACACCACAAA GTCGCGGCCAAGGTCGAGCACGCCGGATTTCTGAGCAATACCAGCAATGTACTGGATATGAACTTTGGCGATCTG GACCCGGCCAACGGCACCATGCTGGTCCCCAATTGCACATTACAGATGCGGGGGAGAGCAGGAAACAACGCGTCT GTCGGCAACAGTGGCGGACGCATGGTGGCGGGCGGCGGGATGATGGCCTCCCAGAACAACGCCTTGGCACAGCAG CGCCCTTTCTTCGTCTCTCCGATAGCCACGGAGCAGATTCTCAAGCGCTTGACGAACGAGATGCGCAATGTTCGG CTGCAGTCTCAGGATTTGAACCGCATGAACGTGTTCGTCAACAGGCTCCTCTCCAAGGACGACGTCAAGGATCTC GAGAAGCCCGACATGCCCGAGCCGTCGAAACCCATGATGAACGGGAGCGGCATTCCGTTCCGCACCGACGGTAAG AATCGCTTCTCCGATCCGCCGGCGCCTCCACCGCAACAACCCCTTCCGGAAAAGCCCGACGCTCTGTCACTCAAA CGCGGGCCGGGCGAGCGACCCAGAATCTCAACGTCGAGTCCGGCATCGTTGAGACAGGATAATCTCGGTCAGGTT ATTCAACTGACCGAGGCGCTGAACAACGCCAAGCAAGAACTGGAGTTTCAGAGTATCCGGATGCACGAGCTGGAG ATGACGCTTGGGAAAGAGCGGGAGGCGCGGGAGCTTGCCGAGGACCTCGCCAGACGGTTCGAGGAGTCGGCTAAC GACCAGACGATCTCGGGGAACCCAACCAACGGATTCTTGGGGTCCATCTATGACGACCCGAAGCCGGCATCAGAC GCGTCGGAGACGAGAATTGGGGGGATCGAGACAGAGGAGGAGTCCTACATGGCAGATGACGCCACGCTGGACGCC GCGCCAGCACTTCAGTCCCGAATCGACACAATGGAAAGACAGATGCGCAACCTCCGAGAGCAGATGGAGATGTGG AAGCAACGCTGCGAAACTGCCGAGACGGAACGCGACGAGGGCCGACGGTCTTTGGCTGACATGGTGGTGCGGCTT CGGGCGGAAGAGGCCAAGCGGCACGGAGAGACGTCCCGGGGGCAGTCCAGAAGGGGTCGCTCCGGACTGCGAGAC ACACCTGGGGACGAAGCCAAGTCATCGCCGGGAGTCGACGGCGCAGGGCCGGAGACGGAGCCGGGAGCAGCAGCA GACGTCATGTCTCAGGGTGACGCGCGGTGGGGCTGCTCATCGGCTGCCCGCGGCGGCGGCGATGGCGGTGACGGC GGTGACGGCAACGATGGGACGGGACAGGCGACGGCAGATGGGTTAAGGGAGCGTTACGTCGAAGCCGCGCTCCCG TACGCGTCGATGCTGGGGGTGGTGCTGATCGGGATGAGTCTGATGGCGTACATTAACGGATGGCAGCCTCCCAGT CCGCAGATGGAGTGA |
Transcript | >Ophun1|1598 ATGGTCAATACCTCGCTGCCCTCTCCATCTCGTGAAAAGTGCAAGAATCGCCAGCACCACGACCTCCTTCGCCGT CGGCCTCGACGAGCCTCTTCCGACGCCCGCATCCTCCCCGAGGCTACGAAGCAGGTAGGCGTCGAGCCGCTGCCC AGACGCAGGCGCTTGGTCTCCACCGAGCACTGTACGAACGTGGCTTCAAACCCCTCCTGGGCCGCTCCCTCGCTG CGTCGCGGCCACGAGACGGTGCCAAGGCATTCGCCGCTGTCATTTCACGGATTCCGCGGCAACAGCCCCATGAAC CCCGACCAAGTCAGAGCCATGTTTGCCCCACGCAAGCAACTCACCCGATCCTCGTCGTCATCGTCCATCTCGTCC AACTCGTCAAACACCACCATCGCCACCAACGGCTCCCAACCGAATGGTACTCCTCTATCCGCCAATACGGACTTG AGTCCCACCTCCGACATGAGTCAATGGTCCAACCGCCCTGCTACTGGCTTCAAGCGGCCGCCGCCCAAGCACACA TGGCTCGCCAAGAGCGACTCGCAGCCGGACCTGACGAGAGGCTCGGTCGGTCGCCCCGGTGGCATGGTAAACCAC CATGCGTCACTGCAGCTGACGCCCGGTCAGCCTTCGATGGCCCAGCAGACGGGCATGCGCGCCCTGGGGCCCGAT CAGTTCCCCCCCGGCCAGCCGGTGCTATTTCTTCTCTCGCTCAACGGAACATTCGAGAGAAAGACCATCGCCGTG CCCTTTGCCCCCGAAAGCCTTCGTATCGGCCGGCAGACGAACCAGAAGACGGTGCCGACTCCCACCAACGGCTTC TTCGATAGCAAAGTGCTGTCTAGGCAACACGCTGAGATTTACGCCGAGCGCAACGGCAAGGTGTATATCCGTGAC GTCAAATCGTCCAACGGCACTTTTGTCAACGGCACTCGCCTCTCTCAGGAGAACCGCGAGTCGGATCCTCACGAG CTGCAGACGGCCGACCACCTCGAACTTGGCATCGACATTGTCAGCGAAGACCAGAAGACGGTCGTACACCACAAA GTCGCGGCCAAGGTCGAGCACGCCGGATTTCTGAGCAATACCAGCAATGTACTGGATATGAACTTTGGCGATCTG GACCCGGCCAACGGCACCATGCTGGTCCCCAATTGCACATTACAGATGCGGGGGAGAGCAGGAAACAACGCGTCT GTCGGCAACAGTGGCGGACGCATGGTGGCGGGCGGCGGGATGATGGCCTCCCAGAACAACGCCTTGGCACAGCAG CGCCCTTTCTTCGTCTCTCCGATAGCCACGGAGCAGATTCTCAAGCGCTTGACGAACGAGATGCGCAATGTTCGG CTGCAGTCTCAGGATTTGAACCGCATGAACGTGTTCGTCAACAGGCTCCTCTCCAAGGACGACGTCAAGGATCTC GAGAAGCCCGACATGCCCGAGCCGTCGAAACCCATGATGAACGGGAGCGGCATTCCGTTCCGCACCGACGGTAAG AATCGCTTCTCCGATCCGCCGGCGCCTCCACCGCAACAACCCCTTCCGGAAAAGCCCGACGCTCTGTCACTCAAA CGCGGGCCGGGCGAGCGACCCAGAATCTCAACGTCGAGTCCGGCATCGTTGAGACAGGATAATCTCGGTCAGGTT ATTCAACTGACCGAGGCGCTGAACAACGCCAAGCAAGAACTGGAGTTTCAGAGTATCCGGATGCACGAGCTGGAG ATGACGCTTGGGAAAGAGCGGGAGGCGCGGGAGCTTGCCGAGGACCTCGCCAGACGGTTCGAGGAGTCGGCTAAC GACCAGACGATCTCGGGGAACCCAACCAACGGATTCTTGGGGTCCATCTATGACGACCCGAAGCCGGCATCAGAC GCGTCGGAGACGAGAATTGGGGGGATCGAGACAGAGGAGGAGTCCTACATGGCAGATGACGCCACGCTGGACGCC GCGCCAGCACTTCAGTCCCGAATCGACACAATGGAAAGACAGATGCGCAACCTCCGAGAGCAGATGGAGATGTGG AAGCAACGCTGCGAAACTGCCGAGACGGAACGCGACGAGGGCCGACGGTCTTTGGCTGACATGGTGGTGCGGCTT CGGGCGGAAGAGGCCAAGCGGCACGGAGAGACGTCCCGGGGGCAGTCCAGAAGGGGTCGCTCCGGACTGCGAGAC ACACCTGGGGACGAAGCCAAGTCATCGCCGGGAGTCGACGGCGCAGGGCCGGAGACGGAGCCGGGAGCAGCAGCA GACGTCATGTCTCAGGGTGACGCGCGGTGGGGCTGCTCATCGGCTGCCCGCGGCGGCGGCGATGGCGGTGACGGC GGTGACGGCAACGATGGGACGGGACAGGCGACGGCAGATGGGTTAAGGGAGCGTTACGTCGAAGCCGCGCTCCCG TACGCGTCGATGCTGGGGGTGGTGCTGATCGGGATGAGTCTGATGGCGTACATTAACGGATGGCAGCCTCCCAGT CCGCAGATGGAGTGA |
Gene | >Ophun1|1598 ATGGTCAATACCTCGCTGCCCTCTCCATCTCGTGAAAAGTGCAAGAATCGCCAGCACCACGACCTCCTTCGCCGT CGGCCTCGACGAGCCTCTTCCGACGCCCGCATCCTCCCCGAGGCTACGAAGCAGGTAGGCGTCGAGCCGCTGCCC AGACGCAGGCGCTTGGTCTCCACCGAGCACTGTACGAACGTGGCTTCAAACCCCTCCTGGGCCGCTCCCTCGCTG CGTCGCGGCCACGAGACGGTGCCAAGGCATTCGCCGCTGTCATTTCACGGATTCCGGTACGTTGCTGCGCCGTCT TCGCGCCCTGCAGGCCCGGTCCGTATTCGACCTGCCGTTCCGCCTCGTCGGTCGGCATTGAGATGCTCGGGTTCG CTGACGAGATTTCGGATGGGCAGCAACCAGCCCCTCGCGTTCTCGACGGCATCAACCGACCTGTTCGGTAGAAGC CGCGCCTGTTCCTGAAGCCGCCCTTTTCACCTGCCTCTCTTCTTTCATCTCGTGTTGTTCGCCGTGACGGATTCG ACGACTTGTCCGTTTCGACTTCCGACACGACGAAAACCACGGGAATCTCATTTCCCTCCCTCTCCTATCGCCTTC CTACGCCTCGCTTAATCTTTCCCCATGACCGCCGTGGCGAGTCCCCCGACCTTTCCTCAGATCTCGAGACCAGCA TGGGGGGCTGTTAGCGGCAACAGCCCCATGAACCCCGACCAAGTCAGAGCCATGTTTGCCCCACGCAAGCAACTC ACCCGATCCTCGTCGTCATCGTCCATCTCGTCCAACTCGTCAAACACCACCATCGCCACCAACGGCTCCCAACCG AATGGTACTCCTCTATCCGCCAATACGGACTTGAGTCCCACCTCCGACATGAGTCAATGGTCCAACCGCCCTGCT ACTGGCTTCAAGCGGCCGCCGCCCAAGCACACATGGCTCGCCAAGAGCGACTCGCAGCCGGACCTGACGAGAGGC TCGGTCGGTCGCCCCGGTGGCATGGTAAACCACCATGCGTCACTGCAGCTGACGCCCGGTCAGCCTTCGATGGCC CAGCAGACGGGCATGCGCGCCCTGGGGCCCGATCAGTTCCCCCCCGGCCAGCCGGTGCTATTTCTTCTCTCGCTC AACGGAACATTCGAGAGAAAGACCATCGCCGTGCCCTTTGCCCCCGAAAGCCTTCGTATCGGCCGGCAGACGAAC CAGAAGACGGTGCCGACTCCCACCAACGGCTTCTTCGATAGCAAAGTGCTGTCTAGGCAACACGCTGAGATTTAC GCCGAGCGCAACGGCAAGGTGTATATCCGTGACGTCAAATCGTCCAACGGCACTTTTGTCAACGGCACTCGCCTC TCTCAGGAGAACCGCGAGTCGGATCCTCACGAGCTGCAGACGGCCGACCACCTCGAACTTGGCATCGACATTGTC AGCGAAGACCAGAAGACGGTCGTACACCACAAAGTCGCGGCCAAGGTCGAGCACGCCGGATTTCTGAGCAATACC AGCAATGTACTGGATATGAACTTTGGCGATCTGGACCCGGCCAACGGCACCATGCTGGTCCCCAATTGCACATTA CAGATGCGGGGGAGAGCAGGAAACAACGCGTCTGTCGGCAACAGTGGCGGACGCATGGTGGCGGGCGGCGGGATG ATGGCCTCCCAGAACAACGCCTTGGCACAGCAGCGCCCTTTCTTCGTCTCTCCGATAGCCACGGAGCAGATTCTC AAGCGCTTGACGGTTAGCATTGGCCTTTCTTCCCTTTTTTCCCTTCTTTCTAACTCGCGGCAGAACGAGATGCGC AATGTTCGGCTGCAGTCTCAGGATTTGAACCGCATGAACGTGTTCGTCAACAGGCTCCTCTCCAAGGACGACGTC AAGGATCTCGAGAAGCCCGACATGCCCGAGCCGTCGAAACCCATGATGAACGGGAGCGGCATTCCGTTCCGCACC GACGGTAAGAATCGCTTCTCCGATCCGCCGGCGCCTCCACCGCAACAACCCCTTCCGGAAAAGCCCGACGCTCTG TCACTCAAACGCGGGCCGGGCGAGCGACCCAGAATCTCAACGTCGAGTCCGGCATCGTTGAGACAGGATAATCTC GGTCAGGTTATTCAACTGACCGAGGCGCTGAACAACGCCAAGCAAGAACTGGAGTTTCAGAGTATCCGGATGCAC GAGCTGGAGATGACGCTTGGGAAAGAGCGGGAGGCGCGGGAGCTTGCCGAGGACCTCGCCAGACGGTTCGAGGAG TCGGCTAACGACCAGACGATCTCGGGGAACCCAACCAACGGATTCTTGGGGTCCATCTATGACGACCCGAAGCCG GCATCAGACGCGTCGGAGACGAGAATTGGGGGGATCGAGACAGAGGAGGAGTCCTACATGGCAGATGACGCCACG CTGGACGCCGCGCCAGCACTTCAGTCCCGAATCGACACAATGGAAAGACAGATGCGCAACCTCCGAGAGCAGATG GAGATGTGGAAGCAACGCTGCGAAACTGCCGAGACGGAACGCGACGAGGGCCGACGGTCTTTGGCTGACATGGTG GTGCGGCTTCGGGCGGAAGAGGCCAAGCGGCACGGAGAGACGTCCCGGGGGCAGTCCAGAAGGGGTCGCTCCGGA CTGCGAGACACACCTGGGGACGAAGCCAAGTCATCGCCGGGAGTCGACGGCGCAGGGCCGGAGACGGAGCCGGGA GCAGCAGCAGACGTCATGTCTCAGGGTGACGCGCGGTGGGGCTGCTCATCGGCTGCCCGCGGCGGCGGCGATGGC GGTGACGGCGGTGACGGCAACGATGGGACGGGACAGGCGACGGCAGATGGGTTAAGGGAGCGTTACGTCGAAGCC GCGCTCCCGTACGCGTCGATGCTGGGGGTGGTGCTGATCGGGATGAGTCTGATGGCGTACATTAACGGATGGCAG CCTCCCAGTCCGCAGATGGAGTGA |