Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1574
Gene name
LocationContig_167:4801..6374
Strand+
Gene length (bp)1573
Transcript length (bp)1464
Coding sequence length (bp)1464
Protein length (aa) 488

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.4E-34 44 412

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 29 471 2.0E-46
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 25 412 7.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 16 400 7.0E-42
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 27 340 2.0E-41
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 18 440 2.0E-37
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 29 471 2.0E-46
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 25 412 7.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 16 400 7.0E-42
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 27 340 2.0E-41
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 18 440 2.0E-37
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 29 396 5.0E-34
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 27 453 4.0E-31
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 7 405 1.0E-27
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 34 459 7.0E-27
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 22 457 1.0E-26
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 29 353 3.0E-25
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 29 438 3.0E-24
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 23 349 1.0E-22
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 13 438 2.0E-22
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 29 468 3.0E-22
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 19 313 1.0E-20
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 23 313 2.0E-20
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 2 313 2.0E-20
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 21 465 3.0E-19
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 4 452 4.0E-19
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 21 247 4.0E-17
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 18 254 8.0E-17
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 30 470 1.0E-15
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 22 258 5.0E-14
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 2 217 1.0E-13
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 29 247 1.0E-12
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 112 260 2.0E-11
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 27 313 2.0E-09
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 33 259 9.0E-09
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 33 259 9.0E-09
sp|P0AA78|EXUT_ECOLI Hexuronate transporter OS=Escherichia coli (strain K12) GN=exuT PE=1 SV=2 48 237 1.0E-05
sp|P0AA79|EXUT_ECO57 Hexuronate transporter OS=Escherichia coli O157:H7 GN=exuT PE=3 SV=2 48 237 1.0E-05
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0009987 cellular process No
GO:0006810 transport No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 40 57 17
2 77 99 22
3 106 125 19
4 135 154 19
5 167 189 22
6 199 221 22
7 271 293 22
8 303 325 22
9 337 359 22
10 364 383 19
11 395 417 22
12 427 444 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1574
MITKQPDDSCIVSHPQDLHLDPQRRAEIEKRLRRKLDARCSIFVLIYIMNYLDRQTISAARLRGLQDDLKLDNTQ
YATCLSILYVGYILMQVPSNMVINRIQRPSLYISAAMVLWGLISTLSGLAHDFGSMVCTRFFLGFVEAAFLPGAL
LLLSKLYTRRELSTRNAILYCGNLISNAFSALVGAAVLSNMQGVLGHAAWRWLFFIEGGTTMVIAVAAAFILPDL
PHNTRGLTSEERLVAQLRMTEDVGEADVDDESQGVFGGLIMALSDVKVYIVMFTVTAYILGLSFNAFFPTLTGTL
GFGYVPTLLMSSPPWVFACIVSVLVSRHSDATQEKFWHIVGPLMLGIVGFAISMSTLNAAARYVALFLQAGSYAG
YIIFYSWISSSFPRPPAKRAVAIALINGFSQLGNVAGSYVWDLKEDGYRKSYGIVLAMFCVSIAGSCVFRRMLNR
LNRELEADERRPVDTSGHSPGRGDETVRMRKGFRYLV*
Coding >Ophun1|1574
ATGATCACCAAGCAGCCTGACGATAGCTGCATCGTCTCCCACCCTCAAGACCTTCACCTCGACCCTCAACGCCGC
GCCGAGATTGAGAAGCGTCTTAGACGCAAACTCGATGCCCGCTGCAGCATCTTCGTCCTCATCTACATAATGAAC
TACCTCGATCGCCAGACCATCAGCGCCGCCCGTCTCAGGGGCCTTCAGGATGACCTCAAGCTCGACAACACTCAG
TACGCAACCTGCCTCAGCATCCTCTACGTCGGCTATATCCTCATGCAAGTACCATCCAACATGGTCATCAACCGC
ATCCAGAGGCCGTCGCTGTACATCTCAGCCGCCATGGTTCTCTGGGGCCTCATCAGCACCCTCAGTGGCCTGGCT
CACGACTTTGGCTCCATGGTCTGCACCCGTTTCTTCCTGGGCTTCGTCGAGGCTGCTTTCCTGCCTGGCGCTCTA
CTGCTTCTCTCCAAGCTGTATACGCGTCGCGAGCTGTCAACCCGCAACGCCATCCTCTACTGTGGGAATCTCATC
TCCAACGCCTTCTCCGCCCTCGTCGGCGCTGCTGTCCTCTCCAACATGCAGGGCGTGTTGGGACACGCTGCCTGG
CGCTGGCTCTTCTTCATCGAGGGCGGAACTACCATGGTCATTGCCGTTGCAGCCGCCTTTATCCTCCCGGATCTG
CCGCATAACACGCGCGGTCTCACGTCTGAGGAGAGACTCGTTGCTCAGCTGCGGATGACGGAGGATGTTGGCGAG
GCTGACGTCGATGATGAGAGCCAGGGTGTCTTTGGCGGCTTGATCATGGCGCTGAGCGACGTCAAGGTCTATATC
GTCATGTTTACCGTCACGGCCTATATACTCGGGTTGTCTTTCAACGCCTTCTTTCCGACGCTCACGGGAACTCTC
GGTTTCGGCTACGTCCCGACACTGCTGATGAGCTCTCCGCCGTGGGTATTCGCCTGTATCGTCTCCGTTCTCGTC
TCCCGCCACTCTGATGCAACTCAGGAAAAGTTCTGGCACATCGTCGGTCCCCTCATGCTCGGCATCGTGGGCTTC
GCCATCAGCATGTCGACCCTCAACGCTGCCGCCCGCTACGTCGCCCTCTTCCTCCAGGCGGGATCGTATGCCGGC
TACATCATCTTCTACTCCTGGATCAGCTCGTCCTTCCCACGCCCGCCGGCGAAGCGCGCCGTCGCCATCGCCCTC
ATCAATGGCTTCAGCCAGCTCGGTAACGTGGCCGGGTCCTACGTCTGGGACCTCAAAGAGGATGGCTACCGCAAG
AGTTACGGCATCGTGCTCGCCATGTTCTGCGTCTCTATTGCGGGGAGCTGTGTCTTCAGGCGGATGCTGAACCGG
CTCAACCGGGAGCTTGAAGCTGACGAGAGGCGGCCTGTCGATACGTCTGGGCATTCTCCTGGCCGTGGTGACGAA
ACGGTAAGGATGAGGAAGGGATTCCGATACCTTGTATGA
Transcript >Ophun1|1574
ATGATCACCAAGCAGCCTGACGATAGCTGCATCGTCTCCCACCCTCAAGACCTTCACCTCGACCCTCAACGCCGC
GCCGAGATTGAGAAGCGTCTTAGACGCAAACTCGATGCCCGCTGCAGCATCTTCGTCCTCATCTACATAATGAAC
TACCTCGATCGCCAGACCATCAGCGCCGCCCGTCTCAGGGGCCTTCAGGATGACCTCAAGCTCGACAACACTCAG
TACGCAACCTGCCTCAGCATCCTCTACGTCGGCTATATCCTCATGCAAGTACCATCCAACATGGTCATCAACCGC
ATCCAGAGGCCGTCGCTGTACATCTCAGCCGCCATGGTTCTCTGGGGCCTCATCAGCACCCTCAGTGGCCTGGCT
CACGACTTTGGCTCCATGGTCTGCACCCGTTTCTTCCTGGGCTTCGTCGAGGCTGCTTTCCTGCCTGGCGCTCTA
CTGCTTCTCTCCAAGCTGTATACGCGTCGCGAGCTGTCAACCCGCAACGCCATCCTCTACTGTGGGAATCTCATC
TCCAACGCCTTCTCCGCCCTCGTCGGCGCTGCTGTCCTCTCCAACATGCAGGGCGTGTTGGGACACGCTGCCTGG
CGCTGGCTCTTCTTCATCGAGGGCGGAACTACCATGGTCATTGCCGTTGCAGCCGCCTTTATCCTCCCGGATCTG
CCGCATAACACGCGCGGTCTCACGTCTGAGGAGAGACTCGTTGCTCAGCTGCGGATGACGGAGGATGTTGGCGAG
GCTGACGTCGATGATGAGAGCCAGGGTGTCTTTGGCGGCTTGATCATGGCGCTGAGCGACGTCAAGGTCTATATC
GTCATGTTTACCGTCACGGCCTATATACTCGGGTTGTCTTTCAACGCCTTCTTTCCGACGCTCACGGGAACTCTC
GGTTTCGGCTACGTCCCGACACTGCTGATGAGCTCTCCGCCGTGGGTATTCGCCTGTATCGTCTCCGTTCTCGTC
TCCCGCCACTCTGATGCAACTCAGGAAAAGTTCTGGCACATCGTCGGTCCCCTCATGCTCGGCATCGTGGGCTTC
GCCATCAGCATGTCGACCCTCAACGCTGCCGCCCGCTACGTCGCCCTCTTCCTCCAGGCGGGATCGTATGCCGGC
TACATCATCTTCTACTCCTGGATCAGCTCGTCCTTCCCACGCCCGCCGGCGAAGCGCGCCGTCGCCATCGCCCTC
ATCAATGGCTTCAGCCAGCTCGGTAACGTGGCCGGGTCCTACGTCTGGGACCTCAAAGAGGATGGCTACCGCAAG
AGTTACGGCATCGTGCTCGCCATGTTCTGCGTCTCTATTGCGGGGAGCTGTGTCTTCAGGCGGATGCTGAACCGG
CTCAACCGGGAGCTTGAAGCTGACGAGAGGCGGCCTGTCGATACGTCTGGGCATTCTCCTGGCCGTGGTGACGAA
ACGGTAAGGATGAGGAAGGGATTCCGATACCTTGTATGA
Gene >Ophun1|1574
ATGATCACCAAGCAGCCTGACGATAGCTGCATCGTCTCCCACCCTCAAGACCTTCACCTCGACCCTCAACGCCGC
GCCGAGATTGAGAAGCGTCTTAGACGCAAACTCGATGCCCGCTGCAGCATCTTCGTCCTCATCTACATAATGAAC
TACCTCGATCGCCAGACCATCAGCGCCGCCCGTCTCAGGGGCCTTCAGGATGACCTCAAGCTCGACAACACTCAG
TACGCAACCTGCCTCAGCATCCTCTACGTCGGCTATATCCTCATGCAAGTACCATCCAACATGGTCATCAACCGC
ATCCAGAGGCCGTCGCTGTACATCTCAGCCGCCATGGTTCTCTGGGGCCTCATCAGCACCCTCAGTGGCCTGGCT
CACGACTTTGGCTCCATGGTCTGCACCCGTTTCTTCCTGGGCTTCGTCGAGGCTGCTTTCCTGCCTGGCGCTCTA
CTGCTTCTCTCCAAGCTGTATACGCGTCGCGAGCTGTCAACCCGCAACGCCATCCTCTACTGTGGGAATCTCATC
TCCAACGCCTTCTCCGCCCTCGTCGGCGCTGCTGTCCTCTCCAACATGCAGGGCGTGTTGGGACACGCTGCCTGG
CGCTGGCTCTTCTTCATCGAGGGCGGAACTACCATGGTCATTGCCGTTGCAGCCGCCTTTATCCTCCCGGATCTG
CCGCATAACACGCGCGGTCTCACGTCTGAGGAGAGACTCGTTGCTCAGCTGCGGATGACGGAGGATGTTGGCGAG
GCTGACGTCGATGATGAGAGCCAGGGTGTCTTTGGCGGCTTGATCATGGCGCTGAGCGACGTCAAGGTCTATATC
GTCATGTTTACCGTCACGGCCTATATACTCGGGTTGTCTTTCAACGCCTTCTTTGTACGTTCTCGTTTCCACTCA
CTCAGTAAACTGCAGTCTTCTGATAGTGAGGCAGCCGACGCTCACGGGAACTCTCGGTTTCGGCTACGTCCCGAC
ACTGCTGATGAGCTCTCCGCCGTGGGTATTCGCCTGTATCGTCTCCGTTCTCGTCTCCCGCCACTCTGATGCAAC
TCAGGAAAAGGTCTCTTGATAGCCCTCAACCCCCTGCTTACTTCAATGCTAACAAATACCTCAGTTCTGGCACAT
CGTCGGTCCCCTCATGCTCGGCATCGTGGGCTTCGCCATCAGCATGTCGACCCTCAACGCTGCCGCCCGCTACGT
CGCCCTCTTCCTCCAGGCGGGATCGTATGCCGGCTACATCATCTTCTACTCCTGGATCAGCTCGTCCTTCCCACG
CCCGCCGGCGAAGCGCGCCGTCGCCATCGCCCTCATCAATGGCTTCAGCCAGCTCGGTAACGTGGCCGGGTCCTA
CGTCTGGGACCTCAAAGAGGATGGCTACCGCAAGAGTTACGGCATCGTGCTCGCCATGTTCTGCGTCTCTATTGC
GGGGAGCTGTGTCTTCAGGCGGATGCTGAACCGGCTCAACCGGGAGCTTGAAGCTGACGAGAGGCGGCCTGTCGA
TACGTCTGGGCATTCTCCTGGCCGTGGTGACGAAACGGTAAGGATGAGGAAGGGATTCCGATACCTTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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