Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1562
Gene name
LocationContig_166:3848..5098
Strand+
Gene length (bp)1250
Transcript length (bp)978
Coding sequence length (bp)978
Protein length (aa) 326

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 51 73 22
3 100 122 22
4 129 151 22
5 180 202 22
6 214 236 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1562
MSYGGDVNRGPFLDVINWLFCSIALAFVALRLISRNLREEQGRWGFDETCLLFAMAVILARSIYITYCIRLGFGR
HLHPLLEADVRETVRLTRHLVILEALSLWTWALPKLPVAILLYRIFGKFRRGLGAILYSLVALLIAIVVVQTVVT
FVKCHPISKNWNPTVPGRCWNPDIYTDIGYFAGAYSAALDFGLAFFASTQVFSLQMSKSRKMLIAASLSLGIPAG
VTTCIKLAMIASLNTSDITYSTVPLEVWNSVEGCALIVAASVPATRPVMRLLGKRLGEWRSLLSGRRSHGSAKAE
GTDHSSGISSKDRVAQPIELERGRH*
Coding >Ophun1|1562
ATGTCGTACGGCGGTGATGTGAACAGAGGCCCGTTCCTCGACGTCATCAACTGGCTGTTTTGCTCCATTGCCCTG
GCATTCGTCGCCCTGCGCTTAATCTCGCGAAACCTGAGGGAAGAACAAGGCCGATGGGGTTTCGACGAGACATGT
CTCCTCTTCGCCATGGCCGTCATTCTCGCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGC
CATCTCCATCCCCTCCTTGAGGCAGACGTGCGTGAGACTGTTCGACTGACGCGGCACCTGGTCATCCTCGAGGCC
CTCAGCCTGTGGACCTGGGCCCTGCCCAAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGG
AGAGGACTCGGCGCCATTCTGTACTCGCTAGTGGCCCTTCTCATCGCCATCGTTGTGGTCCAGACGGTGGTGACG
TTTGTCAAGTGCCATCCCATCTCCAAGAACTGGAACCCAACCGTGCCGGGGAGATGCTGGAATCCGGACATTTAC
ACCGACATTGGCTACTTTGCCGGAGCCTACTCGGCAGCCCTCGACTTTGGCCTGGCCTTCTTTGCCTCGACCCAG
GTGTTTAGTCTCCAGATGAGCAAGTCCCGCAAGATGCTGATAGCCGCCTCTCTGAGTCTCGGGATCCCCGCCGGC
GTCACAACCTGCATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACATCACCTACTCGACCGTCCCCCTC
GAGGTCTGGAACAGCGTCGAAGGCTGCGCGCTCATCGTGGCAGCCTCTGTGCCAGCCACGCGTCCCGTCATGAGA
CTCCTCGGGAAGCGCCTTGGCGAATGGCGCTCTCTTCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCCGAG
GGCACCGACCACAGCAGCGGCATCTCCTCCAAAGACCGCGTTGCACAGCCCATTGAGCTGGAGCGGGGGAGGCAC
TGA
Transcript >Ophun1|1562
ATGTCGTACGGCGGTGATGTGAACAGAGGCCCGTTCCTCGACGTCATCAACTGGCTGTTTTGCTCCATTGCCCTG
GCATTCGTCGCCCTGCGCTTAATCTCGCGAAACCTGAGGGAAGAACAAGGCCGATGGGGTTTCGACGAGACATGT
CTCCTCTTCGCCATGGCCGTCATTCTCGCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGC
CATCTCCATCCCCTCCTTGAGGCAGACGTGCGTGAGACTGTTCGACTGACGCGGCACCTGGTCATCCTCGAGGCC
CTCAGCCTGTGGACCTGGGCCCTGCCCAAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGG
AGAGGACTCGGCGCCATTCTGTACTCGCTAGTGGCCCTTCTCATCGCCATCGTTGTGGTCCAGACGGTGGTGACG
TTTGTCAAGTGCCATCCCATCTCCAAGAACTGGAACCCAACCGTGCCGGGGAGATGCTGGAATCCGGACATTTAC
ACCGACATTGGCTACTTTGCCGGAGCCTACTCGGCAGCCCTCGACTTTGGCCTGGCCTTCTTTGCCTCGACCCAG
GTGTTTAGTCTCCAGATGAGCAAGTCCCGCAAGATGCTGATAGCCGCCTCTCTGAGTCTCGGGATCCCCGCCGGC
GTCACAACCTGCATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACATCACCTACTCGACCGTCCCCCTC
GAGGTCTGGAACAGCGTCGAAGGCTGCGCGCTCATCGTGGCAGCCTCTGTGCCAGCCACGCGTCCCGTCATGAGA
CTCCTCGGGAAGCGCCTTGGCGAATGGCGCTCTCTTCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCCGAG
GGCACCGACCACAGCAGCGGCATCTCCTCCAAAGACCGCGTTGCACAGCCCATTGAGCTGGAGCGGGGGAGGCAC
TGA
Gene >Ophun1|1562
ATGTCGTACGGCGGTGATGTGAACAGAGGCCCGTTCCTCGACGTCATCAACTGGCTGTTTTGCTCCATTGCCCTG
GGTGCGATTCCATCAGCTATCCGTCTCGCAACGAGAGTGCCTAACCAACCTATCGTTCACAGCATTCGTCGCCCT
GCGCTTAATCTCGCGAAACCTGAGGGAAGAACAAGGCCGATGGGGTTTCGACGAGACATGTCTCCTCTTCGCCAT
GGTGAGGCCGGTGCCAAGACTATTCAGTGTTGTCAATCGTCCCGTGCTGACGACAGTCGTCAGGCCGTCATTCTC
GCCCGATCCATCTACATCACATACTGCATACGCCTCGGATTCGGCCGCCATCTCCATCCCCTCCTTGAGGCAGAC
GTGCGTGAGACTGTTCGACTGACGCGGCACCTGGTCATCCTCGAGGCCCTCAGCCTGTGGACCTGGGCCCTGCCC
AAGCTGCCCGTCGCCATCCTGCTGTACCGCATCTTCGGAAAGTTCAGGAGAGGACTCGGCGCCATTCTGTACTCG
CTAGTGGCCCTTCTCATCGCCATCGTTGTGGTCCAGACGGTGGTGACGTTTGTCAAGTGCCATCCCATCTCCAAG
AACTGGAACCCAACCGTGCCGGGGAGATGCTGGAATCCGGACATTTACACCGACATTGGCTACTTTGCCGGAGGT
AGACTCTCTTCTTCCCGCTGGGCTTGCATCAGGCTGACAGACATGAAGCCTACTCGGCAGCCCTCGACTTTGGCC
TGGCCTTCTTTGCCTCGACCCAGGTGTTTAGTCTCCAGATGAGCAAGTCCCGCAAGATGCTGATAGCCGCCTCTC
TGAGTCTCGGGATCCCGTGCGTCTCACAAAGCCAGAATCACCCGACTGTAAACTGACGATTGAGCAGCGCCGGCG
TCACAACCTGCATCAAGCTCGCCATGATTGCCAGCCTCAACACGAGCGACATCACCTGTGAGCTTTTCTCAAGCC
GTCGTAACACGACATGACTGACGCTCCCAGACTCGACCGTCCCCCTCGAGGTCTGGAACAGCGTCGAAGGCTGCG
CGCTCATCGTGGCAGCCTCTGTGCCAGCCACGCGTCCCGTCATGAGACTCCTCGGGAAGCGCCTTGGCGAATGGC
GCTCTCTTCTCAGCGGTCGCAGGAGCCACGGTTCTGCAAAGGCCGAGGGCACCGACCACAGCAGCGGCATCTCCT
CCAAAGACCGCGTTGCACAGCCCATTGAGCTGGAGCGGGGGAGGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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