Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1545
Gene name
LocationContig_164:28110..28816
Strand-
Gene length (bp)706
Transcript length (bp)570
Coding sequence length (bp)570
Protein length (aa) 190

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10311 Ilm1 Increased loss of mitochondrial DNA protein 1 3.4E-63 4 178

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 57 79 22
3 86 108 22
4 149 168 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1545
MALIAAKTIITSVTLFHLTLAFFFLTDPGTIQDQILVYVLGESMGMPLARGFDGQSQPLAFLACVLAMFGLSDLF
ALSMPEELASLYYWGVQAPLRSLFSMLLVFYSYFLGPSSPMYGSAPRSTTRPPPANTTSYRSSPWGGDGLKNRVF
FTFIFLEMITWFWIWVTLREERIGVVERMRKQQARSKQP*
Coding >Ophun1|1545
ATGGCGCTCATCGCAGCAAAGACAATCATCACCTCCGTCACCCTCTTCCACCTAACGCTCGCCTTCTTCTTCCTC
ACGGATCCGGGAACGATACAGGATCAGATCCTCGTCTATGTCCTTGGCGAAAGCATGGGAATGCCCCTTGCTCGA
GGCTTCGATGGCCAATCCCAACCGCTAGCCTTCCTCGCCTGCGTCCTCGCCATGTTCGGACTCAGCGATCTCTTC
GCGCTGTCCATGCCAGAGGAGCTCGCTTCGCTATACTACTGGGGCGTCCAAGCACCCCTCCGCTCCCTATTCTCC
ATGCTCCTCGTCTTCTACTCCTACTTCCTCGGCCCCTCGTCACCCATGTACGGATCTGCCCCGCGATCCACGACC
AGACCCCCACCCGCCAATACGACGAGCTACCGATCCTCACCCTGGGGCGGCGACGGGCTCAAAAACCGCGTCTTC
TTCACCTTTATCTTTCTCGAGATGATTACTTGGTTTTGGATTTGGGTTACGCTTAGGGAGGAGAGGATAGGTGTG
GTGGAGAGGATGCGGAAGCAGCAGGCGCGGTCGAAGCAGCCGTGA
Transcript >Ophun1|1545
ATGGCGCTCATCGCAGCAAAGACAATCATCACCTCCGTCACCCTCTTCCACCTAACGCTCGCCTTCTTCTTCCTC
ACGGATCCGGGAACGATACAGGATCAGATCCTCGTCTATGTCCTTGGCGAAAGCATGGGAATGCCCCTTGCTCGA
GGCTTCGATGGCCAATCCCAACCGCTAGCCTTCCTCGCCTGCGTCCTCGCCATGTTCGGACTCAGCGATCTCTTC
GCGCTGTCCATGCCAGAGGAGCTCGCTTCGCTATACTACTGGGGCGTCCAAGCACCCCTCCGCTCCCTATTCTCC
ATGCTCCTCGTCTTCTACTCCTACTTCCTCGGCCCCTCGTCACCCATGTACGGATCTGCCCCGCGATCCACGACC
AGACCCCCACCCGCCAATACGACGAGCTACCGATCCTCACCCTGGGGCGGCGACGGGCTCAAAAACCGCGTCTTC
TTCACCTTTATCTTTCTCGAGATGATTACTTGGTTTTGGATTTGGGTTACGCTTAGGGAGGAGAGGATAGGTGTG
GTGGAGAGGATGCGGAAGCAGCAGGCGCGGTCGAAGCAGCCGTGA
Gene >Ophun1|1545
ATGGCGCTCATCGCAGCAAAGACAATCATCACCTCCGTCACCCTCTTCCACCTAACGCTCGCCTTCTTCTTCCTC
ACGGATCCGGGAACGATACAGGATCAGATCCTCGTCTATGTCCTTGGCGAAAGCATGGGAATGGTACTCCTCTCT
CCCCCCCCCCCCCCCCCCCCCCCCCCATCTGAATTCTTGAAGCTTTCTCGTGCTGATAATCTGATGGTATAGCCC
CTTGCTCGAGGCTTCGATGGCCAATCCCAACCGCTAGCCTTCCTCGCCTGCGTCCTCGCCATGTTCGGACTCAGC
GATCTCTTCGCGCTGTCCATGCCAGAGGAGCTCGCTTCGCTATACTACTGGGGCGTCCAAGGTAAACCCCCTTCC
CTCATCCCCCAAACCCCCCACCGTCTAACACCGCCCAGCACCCCTCCGCTCCCTATTCTCCATGCTCCTCGTCTT
CTACTCCTACTTCCTCGGCCCCTCGTCACCCATGTACGGATCTGCCCCGCGATCCACGACCAGACCCCCACCCGC
CAATACGACGAGCTACCGATCCTCACCCTGGGGCGGCGACGGGCTCAAAAACCGCGTCTTCTTCACCTTTATCTT
TCTCGAGATGATTACTTGGTTTTGGATTTGGGTTACGCTTAGGGAGGAGAGGATAGGTGTGGTGGAGAGGATGCG
GAAGCAGCAGGCGCGGTCGAAGCAGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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