Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|1531
Gene name
Location	Contig_163:17963..18781
Strand	+
Gene length (bp)	818
Transcript length (bp)	756
Coding sequence length (bp)	756
Protein length (aa)	252

Overview

PFAM Domains

(None)

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5R6Q2\|STX6_PONAB	Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1	91	237	5.0E-09
sp\|O43752\|STX6_HUMAN	Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1	91	237	5.0E-09
sp\|Q63635\|STX6_RAT	Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1	91	238	2.0E-08
sp\|Q9JKK1\|STX6_MOUSE	Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1	91	237	3.0E-08
sp\|Q54IX6\|STX8B_DICDI	Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1	44	227	4.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5R6Q2\|STX6_PONAB	Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1	91	237	5.0E-09
sp\|O43752\|STX6_HUMAN	Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1	91	237	5.0E-09
sp\|Q63635\|STX6_RAT	Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1	91	238	2.0E-08
sp\|Q9JKK1\|STX6_MOUSE	Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1	91	237	3.0E-08
sp\|Q54IX6\|STX8B_DICDI	Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1	44	227	4.0E-08
sp\|Q9SA23\|SYP51_ARATH	Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1	68	250	8.0E-07
sp\|P83528\|STX6_CAEEL	Putative syntaxin 6 OS=Caenorhabditis elegans GN=syx-6 PE=3 SV=1	152	239	4.0E-06
sp\|Q946Y7\|SYP61_ARATH	Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1	146	250	5.0E-06

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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	233	250	17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	2453
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|385
Ophiocordyceps australis map64 (Brazil)	OphauB2\|8163
Ophiocordyceps camponoti-floridani	Ophcf2\|05623
Ophiocordyceps camponoti-rufipedis	Ophun1\|1531 (this protein)
Ophiocordyceps kimflemingae	Ophio5\|8028
Ophiocordyceps subramaniannii	Hirsu2\|3523

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|1531 MSKTNQLFLLADHIKLSLLERHRSKSLDLDCYSQDQHLTRSLDQFRDGLEILQQDKIRSEESGDFSVAESVNKDL LVLQNRYDDLTSQFHGFSTPLSQIDSRIKDPQETTTPTATGSRKPKTVRFNDSASDQLFKPYQDDPSDDTANDDH ISNQQLHDYQTQILDEQDEHLDQLGQSIGRQRELSMRIGDELDCHVAMLEGVEAATDRQQSRLDRASKTIGRVAK GARENKQMTAIVVLIIILVLLIAILK*
Coding	>Ophun1\|1531 ATGTCGAAAACGAACCAGTTATTTCTATTGGCCGACCACATAAAACTATCACTGCTCGAGCGCCATCGCTCGAAG AGTCTCGATCTCGACTGCTATAGCCAAGATCAGCACTTGACCAGATCTCTCGACCAATTTCGAGATGGACTTGAG ATCCTGCAGCAAGATAAGATCCGCTCGGAAGAGTCGGGAGATTTCAGTGTCGCAGAGTCCGTCAATAAAGACCTG CTTGTGTTGCAAAATCGTTACGACGACTTGACCAGCCAGTTCCATGGATTCTCCACACCACTCTCTCAAATAGAT TCAAGAATTAAAGATCCGCAGGAAACCACCACTCCGACGGCCACCGGGTCCAGAAAGCCTAAGACTGTTCGTTTC AACGACTCGGCATCCGACCAGCTATTCAAGCCCTATCAAGACGATCCATCCGACGACACAGCAAATGATGATCAC ATCAGTAATCAACAGCTGCATGATTATCAGACGCAGATACTCGACGAGCAAGACGAACACTTGGACCAACTGGGG CAATCTATCGGGCGCCAACGAGAACTTAGCATGCGAATTGGCGACGAGTTGGATTGTCATGTGGCTATGCTGGAA GGTGTCGAGGCTGCCACTGATCGTCAGCAAAGTCGCCTTGACCGTGCGTCAAAGACAATCGGAAGGGTTGCCAAG GGCGCTCGCGAAAATAAGCAGATGACTGCCATCGTTGTCTTGATAATCATCCTCGTTCTCTTGATCGCGATTTTG AAATAG
Transcript	>Ophun1\|1531 ATGTCGAAAACGAACCAGTTATTTCTATTGGCCGACCACATAAAACTATCACTGCTCGAGCGCCATCGCTCGAAG AGTCTCGATCTCGACTGCTATAGCCAAGATCAGCACTTGACCAGATCTCTCGACCAATTTCGAGATGGACTTGAG ATCCTGCAGCAAGATAAGATCCGCTCGGAAGAGTCGGGAGATTTCAGTGTCGCAGAGTCCGTCAATAAAGACCTG CTTGTGTTGCAAAATCGTTACGACGACTTGACCAGCCAGTTCCATGGATTCTCCACACCACTCTCTCAAATAGAT TCAAGAATTAAAGATCCGCAGGAAACCACCACTCCGACGGCCACCGGGTCCAGAAAGCCTAAGACTGTTCGTTTC AACGACTCGGCATCCGACCAGCTATTCAAGCCCTATCAAGACGATCCATCCGACGACACAGCAAATGATGATCAC ATCAGTAATCAACAGCTGCATGATTATCAGACGCAGATACTCGACGAGCAAGACGAACACTTGGACCAACTGGGG CAATCTATCGGGCGCCAACGAGAACTTAGCATGCGAATTGGCGACGAGTTGGATTGTCATGTGGCTATGCTGGAA GGTGTCGAGGCTGCCACTGATCGTCAGCAAAGTCGCCTTGACCGTGCGTCAAAGACAATCGGAAGGGTTGCCAAG GGCGCTCGCGAAAATAAGCAGATGACTGCCATCGTTGTCTTGATAATCATCCTCGTTCTCTTGATCGCGATTTTG AAATAG
Gene	>Ophun1\|1531 ATGTCGAAAACGAACCAGTTATTTCTATTGGCCGACCACATAAAACTATCACTGCTCGAGCGCCATCGCTCGAAG AGTCTCGATCTCGACTGCTATAGCCAAGATCAGCACTTGACCAGATCTCTCGACCAATTTCGAGATGGACTTGAG ATCCTGCAGCAAGATAAGATCCGCTCGGAAGAGTCGGGAGATTTCAGGTGTGGCACTCCCTTACGATCAACACGG GTCGGTTGAGCGCACGTGTACTCATTCCTTCCAGTGTCGCAGAGTCCGTCAATAAAGACCTGCTTGTGTTGCAAA ATCGTTACGACGACTTGACCAGCCAGTTCCATGGATTCTCCACACCACTCTCTCAAATAGATTCAAGAATTAAAG ATCCGCAGGAAACCACCACTCCGACGGCCACCGGGTCCAGAAAGCCTAAGACTGTTCGTTTCAACGACTCGGCAT CCGACCAGCTATTCAAGCCCTATCAAGACGATCCATCCGACGACACAGCAAATGATGATCACATCAGTAATCAAC AGCTGCATGATTATCAGACGCAGATACTCGACGAGCAAGACGAACACTTGGACCAACTGGGGCAATCTATCGGGC GCCAACGAGAACTTAGCATGCGAATTGGCGACGAGTTGGATTGTCATGTGGCTATGCTGGAAGGTGTCGAGGCTG CCACTGATCGTCAGCAAAGTCGCCTTGACCGTGCGTCAAAGACAATCGGAAGGGTTGCCAAGGGCGCTCGCGAAA ATAAGCAGATGACTGCCATCGTTGTCTTGATAATCATCCTCGTTCTCTTGATCGCGATTTTGAAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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