Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1519
Gene name
LocationContig_162:19542..20346
Strand-
Gene length (bp)804
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 57 79 22
3 92 114 22
4 129 151 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1519
MFEVDTAALRGAGMVVLQMMRACTVITLASVAASCWVLILKVDRESSYFVFECAMDFFRFILCLVLIISEFPVID
FVKGYFRRNWPVVSDQHGLVWLGIIMLLIGCDMFGNLNRPAYEAEKLGPHYSKLLLASSVLAIVFGGLNIICSFI
WRDASDGITCRDVRSNGSLAESRQALPDYASGTFSKTSAKTNGPKTFMNFFWKKNKSEKPRPIISAPTSINEMEQ
GGRFDDDRRSPIVPGLKRPNTALHPMHTHRSSMYSEAHMSRF*
Coding >Ophun1|1519
ATGTTCGAAGTCGACACCGCTGCTCTCCGGGGCGCCGGCATGGTCGTTCTCCAGATGATGCGCGCCTGCACCGTC
ATCACGCTGGCTTCCGTCGCCGCCTCGTGCTGGGTCCTCATCCTCAAGGTGGACAGGGAAAGCAGCTACTTCGTC
TTCGAATGCGCCATGGATTTCTTCCGCTTCATCCTCTGCCTCGTCCTCATCATCTCCGAGTTTCCCGTCATCGAT
TTCGTCAAGGGTTACTTCCGCCGCAACTGGCCCGTCGTCTCGGATCAGCATGGCCTCGTCTGGCTGGGAATCATC
ATGTTGCTCATCGGCTGCGACATGTTCGGCAATCTTAACCGGCCTGCCTACGAAGCCGAAAAGCTGGGACCGCAC
TATTCCAAGCTCCTTCTCGCGTCTTCGGTTCTCGCCATCGTCTTCGGAGGTCTCAACATCATCTGCTCCTTCATC
TGGCGCGATGCCAGCGATGGAATCACCTGCCGCGACGTCCGGTCCAACGGCTCGCTCGCCGAGAGTCGCCAAGCG
CTGCCCGACTACGCCTCTGGCACCTTTTCCAAGACGTCGGCCAAGACAAACGGCCCGAAGACGTTTATGAACTTC
TTCTGGAAGAAGAACAAGTCGGAGAAGCCCAGACCCATCATCAGCGCGCCAACATCTATCAACGAGATGGAGCAA
GGAGGGCGCTTCGACGACGATCGACGAAGCCCCATCGTGCCGGGTCTCAAGCGCCCTAACACTGCGCTTCACCCG
ATGCACACGCACCGCAGCAGCATGTATTCCGAAGCTCACATGTCTCGTTTCTGA
Transcript >Ophun1|1519
ATGTTCGAAGTCGACACCGCTGCTCTCCGGGGCGCCGGCATGGTCGTTCTCCAGATGATGCGCGCCTGCACCGTC
ATCACGCTGGCTTCCGTCGCCGCCTCGTGCTGGGTCCTCATCCTCAAGGTGGACAGGGAAAGCAGCTACTTCGTC
TTCGAATGCGCCATGGATTTCTTCCGCTTCATCCTCTGCCTCGTCCTCATCATCTCCGAGTTTCCCGTCATCGAT
TTCGTCAAGGGTTACTTCCGCCGCAACTGGCCCGTCGTCTCGGATCAGCATGGCCTCGTCTGGCTGGGAATCATC
ATGTTGCTCATCGGCTGCGACATGTTCGGCAATCTTAACCGGCCTGCCTACGAAGCCGAAAAGCTGGGACCGCAC
TATTCCAAGCTCCTTCTCGCGTCTTCGGTTCTCGCCATCGTCTTCGGAGGTCTCAACATCATCTGCTCCTTCATC
TGGCGCGATGCCAGCGATGGAATCACCTGCCGCGACGTCCGGTCCAACGGCTCGCTCGCCGAGAGTCGCCAAGCG
CTGCCCGACTACGCCTCTGGCACCTTTTCCAAGACGTCGGCCAAGACAAACGGCCCGAAGACGTTTATGAACTTC
TTCTGGAAGAAGAACAAGTCGGAGAAGCCCAGACCCATCATCAGCGCGCCAACATCTATCAACGAGATGGAGCAA
GGAGGGCGCTTCGACGACGATCGACGAAGCCCCATCGTGCCGGGTCTCAAGCGCCCTAACACTGCGCTTCACCCG
ATGCACACGCACCGCAGCAGCATGTATTCCGAAGCTCACATGTCTCGTTTCTGA
Gene >Ophun1|1519
ATGTTCGAAGTCGACACCGCTGCTCTCCGGGGCGCCGGCATGGTCGTTCTCCAGATGATGCGCGCCTGCACCGTC
ATCACGCTGGCTTCCGTCGCCGCCTCGTGCTGGGTCCTCATCCTCAAGGTGGACAGGGAAAGCAGCTACTTCGTC
TTCGAATGCGCCATGGATTTCTTCCGCTTCATCCTCTGCCTCGTCCTCATCATCTCCGAGTTTCCCGTCATCGAT
TTCGTCAAGGGTTACTTCCGCCGCAACTGGCCCGTCGTCTCGGATCAGCATGGCCTCGTCTGGCTGGGAATCATC
ATGTTGCTCATCGGCTGCGACATGTTCGGCAATCTTAACCGGCCTGCCTACGAAGCCGAAAAGCTGGGACCGCAC
TATTCCAAGCTCCTTCTCGCGTCTTCGGTTCTCGCCATCGTCTTCGGAGGTCTCAACATCATCTGCTCCTTCATC
TGGCGCGATGCCAGCGATGGAATCACCTGCCGCGACGTCCGGTCCAACGGCTCGCTCGCCGAGAGTCGCCAAGCG
CTGCCCGACTACGCCTCTGGCACCTTTTCCAAGACGTCGGCCAAGACAAACGGCCCGAAGACGTTTATGAACTTC
TTCTGGAAGAAGAACAAGTCGGAGAAGCCCAGACCCATCATCAGCGCGCCAACATCTATCAACGAGATGGAGCAA
GGAGGGCGCTTCGACGACGATCGACGAAGCCCCATCGTGCCGGGTCTCAAGCGCCCTAACACTGCGCTTCACCCG
ATGCACACGCACCGCAGCAGCATGTATTCCGAAGCTCACATGTCTCGTTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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