© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1494 |
| Gene name | |
| Location | Contig_160:26114..29048 |
| Strand | + |
| Gene length (bp) | 2934 |
| Transcript length (bp) | 2637 |
| Coding sequence length (bp) | 2637 |
| Protein length (aa) | 879 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03707 | MHYT | Bacterial signalling protein N terminal repeat | 9.0E-09 | 71 | 126 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O34311|YKOW_BACSU | Signaling protein YkoW OS=Bacillus subtilis (strain 168) GN=ykoW PE=3 SV=2 | 24 | 185 | 2.0E-07 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 25 | 47 | 22 |
| 2 | 59 | 81 | 22 |
| 3 | 101 | 121 | 20 |
| 4 | 128 | 150 | 22 |
| 5 | 165 | 187 | 22 |
| 6 | 200 | 222 | 22 |
| 7 | 242 | 264 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 372 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1494 MQLQMASTQELFLQYEGKIVPHDYEAGLVVVSVIICFVGTSSALELIRRQTSNKGVHNLLLLAGAAICMGGIAMW SMHYIGNRSVRFLDGQKEFEFVYKTGLAVVALLIPIIVLFVAFVIITRHGRVCWVRITLAGFISGATLVGMHYLV DASIDNYKTVYHVGNIVGAALIGVFTNIGALAFLFVFESAWTDRWWKRPICAFLLAVCISAENWCAAAGTQYRLR GPHHHPALLSTKGSIIVVICLTVGGFVFTVLSGVYSYWIQKDYAKKAQKVALAAAVFDDRGRIMVSHEGLLPSEV ITDTFIPTSNNDVFDTSNPVFHWMFWASRNWPRIAHVLPGMEAHVASLSSKTNRKLKLKLLGEDGEAVENYNMIL CELYCLAASSLSSRMKEDIESTGMLWDEIFATGDVSGSFGRSSSSYSGGSSELPMYRSSTSSIIKPEETNEKHDD RSNDGHGKGSLMFIVRHVSSRRDVERLEAAGFRFAEIHRVLGSIRTGMQIKTPDFAARLRIMSTFNEQDSDLRPG VHVGLFALRARVDLGGFDVLVQRKAKNLLPTVHLQRESLGQWQKDILERISGMTTPEIIENLNVDQFDSARERHF ARQLLEAITSLRSWTDQPIFDEAKLNTSIVQVPCSSIDQSATCSVLTFQLMLPIHLTISFRNYEAIPLQFFKVRQ FFSPGFNGPGRTSTGGMAQNGLHFPNSNSSLGGDSGPTTFMEFVKPGRRFRKNVPYRPSNHTLAQSFKRLSFGTS GRNARPGSATGDATGDTLPFAAAMAPPGQADLHHGHSILVSQEVVVNYQQSFDPEADEMDITEKDTWEAGGPSEP SRQYRPGLTPPPEAESYSVTATGTDVNRAKDEASFVDELLQNCMEQYKPKRRQ* |
| Coding | >Ophun1|1494 ATGCAGCTCCAGATGGCGTCTACGCAGGAACTGTTCCTCCAGTATGAGGGCAAGATCGTGCCTCACGACTACGAG GCTGGTCTTGTTGTCGTCAGCGTCATCATTTGCTTCGTCGGCACCAGCTCTGCTCTTGAGCTCATCCGCCGTCAG ACGTCCAACAAGGGAGTCCATAACCTTCTTTTGCTTGCTGGCGCTGCCATCTGTATGGGCGGAATTGCTATGTGG TCGATGCACTACATTGGCAACAGATCCGTTCGCTTTCTCGACGGACAGAAAGAGTTCGAGTTCGTCTATAAGACG GGTCTCGCCGTTGTCGCACTCTTAATCCCCATCATCGTCCTGTTCGTGGCCTTCGTCATCATCACCCGCCACGGA AGAGTCTGCTGGGTGCGCATCACCCTTGCAGGCTTCATCTCCGGAGCGACGCTCGTGGGAATGCACTACCTCGTC GACGCGTCCATCGACAACTACAAGACCGTCTATCACGTCGGCAACATCGTCGGCGCCGCCTTGATAGGAGTCTTT ACGAATATCGGCGCGCTGGCCTTTCTCTTCGTCTTTGAGTCTGCTTGGACCGACAGGTGGTGGAAGAGGCCCATT TGCGCCTTTCTCCTGGCCGTTTGCATCTCCGCTGAGAACTGGTGTGCCGCCGCCGGAACGCAGTACAGACTGCGC GGCCCTCACCATCATCCAGCGTTGCTATCGACCAAGGGCTCCATCATCGTCGTCATCTGCTTGACGGTAGGCGGC TTCGTCTTCACCGTTCTGAGTGGCGTCTACTCGTACTGGATCCAGAAGGACTACGCCAAGAAGGCGCAGAAGGTG GCCCTGGCAGCAGCAGTCTTTGACGACCGCGGGAGGATCATGGTCAGCCACGAAGGTCTTCTTCCTAGTGAAGTC ATTACCGACACCTTTATCCCAACTTCAAACAACGACGTCTTTGACACCTCCAACCCCGTCTTCCACTGGATGTTC TGGGCGTCTCGCAACTGGCCCAGAATTGCCCACGTCCTGCCAGGCATGGAAGCCCACGTGGCTAGCCTGTCGAGC AAGACGAACCGCAAGCTGAAGCTCAAGCTGCTGGGCGAAGATGGAGAGGCGGTCGAGAACTACAACATGATTCTC TGCGAGCTGTACTGCCTCGCCGCTTCGTCGCTCTCGTCGCGGATGAAGGAAGATATTGAGTCGACGGGCATGCTC TGGGACGAGATCTTTGCTACGGGTGATGTCTCGGGCTCTTTCGGCCGCTCTTCATCTTCATACAGCGGCGGCAGC AGTGAGCTGCCCATGTACCGCTCCTCGACAAGCTCCATCATCAAGCCGGAAGAGACGAATGAGAAGCACGATGAC CGAAGCAACGACGGCCACGGAAAGGGATCTCTCATGTTCATCGTCCGACACGTCAGCAGCCGGCGAGACGTCGAG AGGCTCGAGGCAGCTGGCTTCCGCTTCGCTGAGATCCATCGTGTTCTCGGCTCGATCCGGACGGGGATGCAGATC AAGACGCCCGATTTCGCTGCCCGGCTACGTATCATGTCTACTTTCAACGAGCAGGACAGCGATCTCCGGCCTGGC GTCCACGTCGGACTCTTCGCTCTCCGTGCCAGAGTCGATCTTGGTGGCTTCGACGTGCTGGTTCAGCGCAAGGCC AAGAATCTGCTTCCGACGGTGCACCTTCAGAGGGAGTCGTTGGGACAGTGGCAGAAGGACATTCTCGAGCGCATC AGCGGAATGACGACGCCTGAAATCATTGAGAACCTCAACGTCGACCAATTCGATTCCGCACGGGAACGTCATTTC GCTCGCCAGCTGCTCGAGGCCATCACCTCGCTACGATCGTGGACAGACCAGCCCATCTTCGACGAAGCCAAGCTC AACACTAGCATTGTCCAGGTTCCCTGCTCGTCCATCGACCAGTCAGCCACATGCTCGGTCCTGACATTCCAGCTG ATGCTCCCGATCCACCTGACCATCTCATTCCGGAACTACGAGGCCATCCCTCTGCAGTTCTTCAAGGTCCGCCAG TTCTTTAGCCCGGGCTTCAACGGCCCTGGACGTACGTCTACCGGCGGAATGGCACAGAACGGTCTTCACTTCCCC AACAGCAACTCGTCTCTTGGTGGCGATTCAGGCCCGACGACCTTTATGGAGTTTGTGAAGCCGGGCCGTCGGTTC AGGAAGAACGTTCCGTACAGGCCGTCGAACCATACCTTGGCCCAGAGCTTCAAGAGGTTGTCCTTTGGGACTAGT GGCCGCAACGCGAGGCCCGGTTCGGCGACGGGCGACGCTACTGGGGACACGCTGCCCTTTGCGGCCGCTATGGCG CCTCCGGGGCAGGCAGATCTGCATCATGGCCACAGCATCCTTGTCTCACAGGAGGTTGTGGTGAATTATCAACAG TCGTTTGATCCCGAGGCCGATGAGATGGACATTACGGAAAAGGACACCTGGGAGGCTGGAGGTCCGTCAGAGCCA TCCCGTCAGTACCGGCCGGGCCTGACGCCGCCCCCGGAGGCCGAGTCGTACAGCGTCACGGCGACGGGGACGGAT GTCAACCGGGCCAAGGACGAGGCCAGCTTCGTCGACGAGTTGCTGCAGAACTGCATGGAACAGTACAAGCCCAAA AGGAGGCAATGA |
| Transcript | >Ophun1|1494 ATGCAGCTCCAGATGGCGTCTACGCAGGAACTGTTCCTCCAGTATGAGGGCAAGATCGTGCCTCACGACTACGAG GCTGGTCTTGTTGTCGTCAGCGTCATCATTTGCTTCGTCGGCACCAGCTCTGCTCTTGAGCTCATCCGCCGTCAG ACGTCCAACAAGGGAGTCCATAACCTTCTTTTGCTTGCTGGCGCTGCCATCTGTATGGGCGGAATTGCTATGTGG TCGATGCACTACATTGGCAACAGATCCGTTCGCTTTCTCGACGGACAGAAAGAGTTCGAGTTCGTCTATAAGACG GGTCTCGCCGTTGTCGCACTCTTAATCCCCATCATCGTCCTGTTCGTGGCCTTCGTCATCATCACCCGCCACGGA AGAGTCTGCTGGGTGCGCATCACCCTTGCAGGCTTCATCTCCGGAGCGACGCTCGTGGGAATGCACTACCTCGTC GACGCGTCCATCGACAACTACAAGACCGTCTATCACGTCGGCAACATCGTCGGCGCCGCCTTGATAGGAGTCTTT ACGAATATCGGCGCGCTGGCCTTTCTCTTCGTCTTTGAGTCTGCTTGGACCGACAGGTGGTGGAAGAGGCCCATT TGCGCCTTTCTCCTGGCCGTTTGCATCTCCGCTGAGAACTGGTGTGCCGCCGCCGGAACGCAGTACAGACTGCGC GGCCCTCACCATCATCCAGCGTTGCTATCGACCAAGGGCTCCATCATCGTCGTCATCTGCTTGACGGTAGGCGGC TTCGTCTTCACCGTTCTGAGTGGCGTCTACTCGTACTGGATCCAGAAGGACTACGCCAAGAAGGCGCAGAAGGTG GCCCTGGCAGCAGCAGTCTTTGACGACCGCGGGAGGATCATGGTCAGCCACGAAGGTCTTCTTCCTAGTGAAGTC ATTACCGACACCTTTATCCCAACTTCAAACAACGACGTCTTTGACACCTCCAACCCCGTCTTCCACTGGATGTTC TGGGCGTCTCGCAACTGGCCCAGAATTGCCCACGTCCTGCCAGGCATGGAAGCCCACGTGGCTAGCCTGTCGAGC AAGACGAACCGCAAGCTGAAGCTCAAGCTGCTGGGCGAAGATGGAGAGGCGGTCGAGAACTACAACATGATTCTC TGCGAGCTGTACTGCCTCGCCGCTTCGTCGCTCTCGTCGCGGATGAAGGAAGATATTGAGTCGACGGGCATGCTC TGGGACGAGATCTTTGCTACGGGTGATGTCTCGGGCTCTTTCGGCCGCTCTTCATCTTCATACAGCGGCGGCAGC AGTGAGCTGCCCATGTACCGCTCCTCGACAAGCTCCATCATCAAGCCGGAAGAGACGAATGAGAAGCACGATGAC CGAAGCAACGACGGCCACGGAAAGGGATCTCTCATGTTCATCGTCCGACACGTCAGCAGCCGGCGAGACGTCGAG AGGCTCGAGGCAGCTGGCTTCCGCTTCGCTGAGATCCATCGTGTTCTCGGCTCGATCCGGACGGGGATGCAGATC AAGACGCCCGATTTCGCTGCCCGGCTACGTATCATGTCTACTTTCAACGAGCAGGACAGCGATCTCCGGCCTGGC GTCCACGTCGGACTCTTCGCTCTCCGTGCCAGAGTCGATCTTGGTGGCTTCGACGTGCTGGTTCAGCGCAAGGCC AAGAATCTGCTTCCGACGGTGCACCTTCAGAGGGAGTCGTTGGGACAGTGGCAGAAGGACATTCTCGAGCGCATC AGCGGAATGACGACGCCTGAAATCATTGAGAACCTCAACGTCGACCAATTCGATTCCGCACGGGAACGTCATTTC GCTCGCCAGCTGCTCGAGGCCATCACCTCGCTACGATCGTGGACAGACCAGCCCATCTTCGACGAAGCCAAGCTC AACACTAGCATTGTCCAGGTTCCCTGCTCGTCCATCGACCAGTCAGCCACATGCTCGGTCCTGACATTCCAGCTG ATGCTCCCGATCCACCTGACCATCTCATTCCGGAACTACGAGGCCATCCCTCTGCAGTTCTTCAAGGTCCGCCAG TTCTTTAGCCCGGGCTTCAACGGCCCTGGACGTACGTCTACCGGCGGAATGGCACAGAACGGTCTTCACTTCCCC AACAGCAACTCGTCTCTTGGTGGCGATTCAGGCCCGACGACCTTTATGGAGTTTGTGAAGCCGGGCCGTCGGTTC AGGAAGAACGTTCCGTACAGGCCGTCGAACCATACCTTGGCCCAGAGCTTCAAGAGGTTGTCCTTTGGGACTAGT GGCCGCAACGCGAGGCCCGGTTCGGCGACGGGCGACGCTACTGGGGACACGCTGCCCTTTGCGGCCGCTATGGCG CCTCCGGGGCAGGCAGATCTGCATCATGGCCACAGCATCCTTGTCTCACAGGAGGTTGTGGTGAATTATCAACAG TCGTTTGATCCCGAGGCCGATGAGATGGACATTACGGAAAAGGACACCTGGGAGGCTGGAGGTCCGTCAGAGCCA TCCCGTCAGTACCGGCCGGGCCTGACGCCGCCCCCGGAGGCCGAGTCGTACAGCGTCACGGCGACGGGGACGGAT GTCAACCGGGCCAAGGACGAGGCCAGCTTCGTCGACGAGTTGCTGCAGAACTGCATGGAACAGTACAAGCCCAAA AGGAGGCAATGA |
| Gene | >Ophun1|1494 ATGCAGCTCCAGATGGCGTCTACGCAGGAACTGTTCCTCCAGTATGAGGGCAAGATCGTGCCTCACGACTACGAG GCTGGTCTTGTTGTCGTCAGCGTCATCATTTGCTTCGTCGGCACCAGCTCTGCTCTTGAGCTCATCCGCCGTCAG ACGTCCAACAAGGGAGTCCATAACCTGTAAGATCCGGGTCTGTTAGAGTCGTGTGAGACTTGACTGACGTGCTGC TCTCTCAGTCTTTTGCTTGCTGGCGCTGCCATCTGTATGGGCGGAATTGCTATGTGGTCGATGGTAGGTGATGGC ATCCAAGCCTCTTCGTTTCCACGATGGCTAACAAGACTTCCAGCACTACATTGGCAACAGATCCGTTCGCTTTCT CGACGGACAGAAAGAGTTCGAGTTCGTCTATAAGACGGGTCTCGCCGTTGTCGCACTCTTAATCCCCATCATCGT CCTGTTCGTGGCCTTCGTCATCATCACCCGCCACGGAAGAGTCTGCTGGGTGCGCATCACCCTTGCAGGCTTCAT CTCCGGAGCGACGCTCGTGGGAATGCACTACCTCGTCGACGCGTCCATCGACAACTACAAGACCGTCTATCACGT CGGCAACATCGTCGGCGCCGCCTTGATAGGAGTCTTTACGAATATCGGCGCGCTGGCCTTTCTCTTCGTCTTTGA GTCTGCTTGGACCGACAGGTGGTGGAAGAGGCCCATTTGCGCCTTTCTCCTGGCCGTTTGCATCTCCGCTGAGAA CTGGTGTGCCGCCGCCGGAACGCAGTACAGACTGCGCGGCCCTCACCATCATCCAGCGTTGCTATCGACCAAGGG CTCCATCATCGTCGTCATCTGCTTGGTAAGTCTGCTTCGCTCCCTTACTCTACGGTGAAGAGTCTAACAGAGAGT AAAGACGGTAGGCGGCTTCGTCTTCACCGTTCTGAGTGGCGTCTACTCGTACTGGATCCAGAAGGACTACGCCAA GAAGGCGCAGAAGGTGGCCCTGGCAGCAGCAGTCTTTGACGACCGCGGGAGGATCATGGTCAGCCACGAAGGTCT TCTTCCTAGTGAAGTCATTACCGACACCTTTATCCCAACTGTGAGTGTTTCGCTTCGCTCTTCCTTCTGTGTGAG TTGGAAGTTGCAGAATCTGACATGGCGAAATCAGTCAAACAACGACGTCTTTGACACCTCCAACCCCGTCTTCCA CTGGATGTTCTGGGCGTCTCGCAACTGGCCCAGAATTGCCCACGTCCTGCCAGGCATGGAAGCCCACGTGGCTAG CCTGTCGAGCAAGACGAACCGCAAGCTGAAGCTCAAGCTGCTGGGCGAAGATGGAGAGGCGGTCGAGAACTACAA CATGATTCTCTGCGAGCTGTACTGCCTCGCCGCTTCGTCGCTCTCGTCGCGGATGAAGGAAGATATTGAGTCGAC GGGCATGCTCTGGGACGAGATCTTTGCTACGGGTGATGTCTCGGGCTCTTTCGGCCGCTCTTCATCTTCATACAG CGGCGGCAGCAGTGAGCTGCCCATGTACCGCTCCTCGACAAGCTCCATCATCAAGCCGGAAGAGACGAATGAGAA GCACGATGACCGAAGCAACGACGGCCACGGAAAGGGATCTCTCATGTTCATCGTCCGACACGTCAGCAGCCGGCG AGACGTCGAGAGGCTCGAGGCAGCTGGCTTCCGCTTCGCTGAGATCCATCGTGTTCTCGGCTCGATCCGGACGGG GATGCAGATCAAGACGCCCGATTTCGCTGCCCGGCTACGTATCATGTCTACTTTCAACGAGCAGGACAGCGATCT CCGGCCTGGCGTCCACGTCGGACTCTTCGCTCTCCGTGCCAGAGTCGATCTTGGTGGCTTCGACGTGCTGGTTCA GCGCAAGGCCAAGAATCTGCTTCCGACGGTGCACCTTCAGAGGGAGTCGTTGGGACAGTGGCAGAAGGACATTCT CGAGCGCATCAGCGGAATGACGACGCCTGAAATCATTGAGAACCTCAACGTCGACCAATTCGATTCCGCACGGGA ACGTCATTTCGCTCGCCAGCTGCTCGAGGCCATCACCTCGCTACGATCGTGGACAGACCAGCCCATCTTCGACGA AGCCAAGCTCAACACTAGCATTGTCCAGGTTCCCTGCTCGTCCATCGACCAGTCAGCCACATGCTCGGTCCTGAC ATTCCAGCTGATGCTCCCGATCCACCTGACCATCTCATTCCGGAACTACGAGGCCATCCCTCTGCAGTTCTTCAA GGTCCGCCAGTTCTTTAGCCCGGGCTTCAACGGCCCTGGACGTACGTCTACCGGCGGAATGGCACAGAACGGTCT TCACTTCCCCAACAGCAACTCGTCTCTTGGTGGCGATTCAGGCCCGACGACCTTTATGGAGTTTGTGAAGCCGGG CCGTCGGTTCAGGAAGAACGTTCCGTACAGGCCGTCGAACCATACCTTGGCCCAGAGCTTCAAGAGGTTGTCCTT TGGGACTAGTGGCCGCAACGCGAGGCCCGGTTCGGCGACGGGCGACGCTACTGGGGACACGCTGCCCTTTGCGGC CGCTATGGCGCCTCCGGGGCAGGCAGATCTGCATCATGGCCACAGCATCCTTGTCTCACAGGAGGTTGTGGTGAA TTATCAACAGGTTAGTTGTCTCGACGCTTCTCTGTCTAGTTCTGATACAGATGCTAACATTCGTCTTCACAGTCG TTTGATCCCGAGGCCGATGAGATGGACATTACGGAAAAGGACACCTGGGAGGCTGGAGGTCCGTCAGAGCCATCC CGTCAGTACCGGCCGGGCCTGACGCCGCCCCCGGAGGCCGAGTCGTACAGCGTCACGGCGACGGGGACGGATGTC AACCGGGCCAAGGACGAGGCCAGCTTCGTCGACGAGTTGCTGCAGAACTGCATGGAACAGTACAAGCCCAAAAGG AGGCAATGA |