Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1463
Gene name
LocationContig_16:16958..17521
Strand+
Gene length (bp)563
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.99766

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 7 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup16512
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-rufipedis Ophun1|1463 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1463
MKIFTASISLSVASAMAGISNFRLYDPVARTEICHPGFTYCGTTLRSMSDKHIDDMILAHQLKYLSPGSEFSRDK
LLYICYKAGDIDDEEFPVQIGNLRILSVCEDMNKTCVASRSGENATCEVGKDTPGVTVTGGRSLRKLLLNVFNLF
GYSTD*
Coding >Ophun1|1463
ATGAAGATCTTTACAGCATCTATCTCCCTTTCCGTTGCCAGTGCTATGGCAGGAATTTCGAATTTCAGATTATAC
GACCCTGTTGCTAGGACAGAGATTTGCCACCCCGGCTTTACTTACTGCGGAACTACACTTCGGTCTATGAGTGAC
AAGCACATTGATGATATGATCTTGGCCCACCAGCTAAAATATCTCTCTCCGGGCAGCGAGTTCTCTAGAGACAAG
CTTCTTTATATCTGTTACAAGGCAGGCGACATTGATGATGAGGAATTTCCGGTTCAGATTGGTAATCTCCGCATC
CTAAGCGTGTGCGAGGACATGAATAAGACGTGCGTGGCTAGCAGGAGTGGTGAGAACGCCACGTGTGAGGTTGGT
AAGGATACGCCTGGTGTCACTGTAACTGGGGGTAGAAGTCTACGAAAGCTGCTCCTCAACGTCTTCAACCTTTTT
GGATACAGTACAGATTAA
Transcript >Ophun1|1463
ATGAAGATCTTTACAGCATCTATCTCCCTTTCCGTTGCCAGTGCTATGGCAGGAATTTCGAATTTCAGATTATAC
GACCCTGTTGCTAGGACAGAGATTTGCCACCCCGGCTTTACTTACTGCGGAACTACACTTCGGTCTATGAGTGAC
AAGCACATTGATGATATGATCTTGGCCCACCAGCTAAAATATCTCTCTCCGGGCAGCGAGTTCTCTAGAGACAAG
CTTCTTTATATCTGTTACAAGGCAGGCGACATTGATGATGAGGAATTTCCGGTTCAGATTGGTAATCTCCGCATC
CTAAGCGTGTGCGAGGACATGAATAAGACGTGCGTGGCTAGCAGGAGTGGTGAGAACGCCACGTGTGAGGTTGGT
AAGGATACGCCTGGTGTCACTGTAACTGGGGGTAGAAGTCTACGAAAGCTGCTCCTCAACGTCTTCAACCTTTTT
GGATACAGTACAGATTAA
Gene >Ophun1|1463
ATGAAGATCTTTACAGCATCTATCTCCCTTTCCGTTGCCAGTGCTATGGCAGGAATTTCGAATTTCAGATTATAC
GACCCTGTTGCTAGGACAGAGATTTGCCACCCCGGCTTTACTTACTGCGGAACTACACTTCGGTCTATGAGTGGT
GAGTGAGATATCCCTCATGATTGCTAGATGAGCGCCGCGTACGAATACGTGTACCGCTTCGGCACAGCGGTGCTT
GAACTAACGCCTCAACAGACAAGCACATTGATGATATGATCTTGGCCCACCAGCTAAAATATCTCTCTCCGGGCA
GCGAGTTCTCTAGAGACAAGCTTCTTTATATCTGTTACAAGGCAGGCGACATTGATGATGAGGAATTTCCGGTTC
AGATTGGTAATCTCCGCATCCTAAGCGTGTGCGAGGACATGAATAAGACGTGCGTGGCTAGCAGGAGTGGTGAGA
ACGCCACGTGTGAGGTTGGTAAGGATACGCCTGGTGTCACTGTAACTGGGGGTAGAAGTCTACGAAAGCTGCTCC
TCAACGTCTTCAACCTTTTTGGATACAGTACAGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail