Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|146
Gene name
LocationContig_1018:2895..4520
Strand-
Gene length (bp)1625
Transcript length (bp)1389
Coding sequence length (bp)1389
Protein length (aa) 463

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04142 Nuc_sug_transp Nucleotide-sugar transporter 1.7E-96 26 387

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P87041|GMS1_SCHPO UDP-galactose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gms1 PE=2 SV=3 24 390 1.0E-83
sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1 25 396 4.0E-65
sp|O77592|S35A3_CANLF UDP-N-acetylglucosamine transporter OS=Canis lupus familiaris GN=SLC35A3 PE=2 SV=1 25 396 1.0E-64
sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1 25 396 7.0E-64
sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1 25 396 2.0E-63
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Swissprot ID Swissprot Description Start End E-value
sp|P87041|GMS1_SCHPO UDP-galactose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gms1 PE=2 SV=3 24 390 1.0E-83
sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1 25 396 4.0E-65
sp|O77592|S35A3_CANLF UDP-N-acetylglucosamine transporter OS=Canis lupus familiaris GN=SLC35A3 PE=2 SV=1 25 396 1.0E-64
sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1 25 396 7.0E-64
sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1 25 396 2.0E-63
sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=1 SV=1 25 396 4.0E-63
sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=1 SV=1 24 435 2.0E-57
sp|Q8WMS0|S35A2_CANLF UDP-galactose translocator OS=Canis lupus familiaris GN=SLC35A2 PE=2 SV=2 24 390 3.0E-57
sp|P78381|S35A2_HUMAN UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=1 SV=1 24 390 4.0E-57
sp|Q58DA6|S35A2_BOVIN UDP-galactose translocator OS=Bos taurus GN=SLC35A2 PE=2 SV=1 24 390 5.0E-57
sp|P78382|S35A1_HUMAN CMP-sialic acid transporter OS=Homo sapiens GN=SLC35A1 PE=2 SV=1 31 413 7.0E-51
sp|Q61420|S35A1_MOUSE CMP-sialic acid transporter OS=Mus musculus GN=Slc35a1 PE=1 SV=2 31 391 1.0E-49
sp|O08520|S35A1_CRIGR CMP-sialic acid transporter OS=Cricetulus griseus GN=SLC35A1 PE=2 SV=1 31 413 3.0E-48
sp|Q02334|UGTP1_CAEEL UDP-galactose translocator 1 OS=Caenorhabditis elegans GN=ugtp-1 PE=3 SV=2 30 387 9.0E-34
sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5 255 387 9.0E-27
sp|B8B7Q4|CSTR2_ORYSI CMP-sialic acid transporter 2 OS=Oryza sativa subsp. indica GN=CSTLP2 PE=3 SV=1 29 390 2.0E-26
sp|Q6ZL17|CSTR2_ORYSJ CMP-sialic acid transporter 2 OS=Oryza sativa subsp. japonica GN=CSTLP2 PE=2 SV=1 29 390 2.0E-26
sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1 18 387 4.0E-26
sp|Q5R4D7|S35A5_PONAB Probable UDP-sugar transporter protein SLC35A5 OS=Pongo abelii GN=SLC35A5 PE=2 SV=1 35 434 3.0E-22
sp|Q6DCG9|S35A5_XENLA Probable UDP-sugar transporter protein SLC35A5 OS=Xenopus laevis GN=slc35a5 PE=2 SV=1 109 387 6.0E-21
sp|Q9BS91|S35A5_HUMAN Probable UDP-sugar transporter protein SLC35A5 OS=Homo sapiens GN=SLC35A5 PE=1 SV=2 35 434 1.0E-20
sp|Q921R7|S35A5_MOUSE Probable UDP-sugar transporter protein SLC35A5 OS=Mus musculus GN=Slc35a5 PE=1 SV=3 28 411 4.0E-20
sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5 31 189 5.0E-18
sp|A4IHW3|S35A4_XENTR Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1 51 386 3.0E-17
sp|Q654D9|CSTR1_ORYSJ CMP-sialic acid transporter 1 OS=Oryza sativa subsp. japonica GN=CSTLP1 PE=2 SV=1 51 389 1.0E-16
sp|B8B350|CSTR1_ORYSI CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica GN=CSTLP1 PE=3 SV=1 51 389 2.0E-16
sp|Q90X48|S35A5_DANRE Probable UDP-sugar transporter protein SLC35A5 OS=Danio rerio GN=slc35a5 PE=2 SV=1 26 397 9.0E-16
sp|A6QPI1|S35A5_BOVIN Probable UDP-sugar transporter protein SLC35A5 OS=Bos taurus GN=SLC35A5 PE=2 SV=1 28 430 1.0E-15
sp|A0JMG9|S35A4_DANRE Probable UDP-sugar transporter protein SLC35A4 OS=Danio rerio GN=slc35a4 PE=2 SV=1 111 386 1.0E-14
sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1 108 389 9.0E-14
sp|Q91ZR7|S35A4_RAT Probable UDP-sugar transporter protein SLC35A4 OS=Rattus norvegicus GN=Slc35a4 PE=2 SV=2 225 386 3.0E-07
sp|Q9D321|S35A4_MOUSE Probable UDP-sugar transporter protein SLC35A4 OS=Mus musculus GN=Slc35a4 PE=2 SV=1 108 386 1.0E-06
sp|Q96G79|S35A4_HUMAN Probable UDP-sugar transporter protein SLC35A4 OS=Homo sapiens GN=SLC35A4 PE=2 SV=1 257 386 4.0E-06
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GO

GO Term Description Terminal node
GO:0000139 Golgi membrane Yes
GO:0016021 integral component of membrane Yes
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity Yes
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport Yes
GO:0055085 transmembrane transport No
GO:0098588 bounding membrane of organelle No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:1901505 carbohydrate derivative transmembrane transporter activity No
GO:0015931 nucleobase-containing compound transport No
GO:0015780 nucleotide-sugar transmembrane transport No
GO:0005338 nucleotide-sugar transmembrane transporter activity No
GO:0071705 nitrogen compound transport No
GO:0051179 localization No
GO:0016020 membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0015932 nucleobase-containing compound transmembrane transporter activity No
GO:0003674 molecular_function No
GO:1901264 carbohydrate derivative transport No
GO:0008150 biological_process No
GO:0031090 organelle membrane No
GO:0071702 organic substance transport No
GO:0005215 transporter activity No
GO:0022857 transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 133 155 22
3 164 181 17
4 243 265 22
5 278 300 22
6 315 337 22
7 342 364 22
8 369 388 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|146
MTILEAAGPRRSKVVTLREDKVGRNLSFLTLTFQNSALILIMHYSRMMPPSGDHRYFTSTAVLLNEVIKLAVSLT
LAIYETSQTLAPSTPATILFEQIYNAVFSGDGWKLALPAAFYTLQNLLQYLAVGNLDPVHFQVLYQVKILTTAVF
SVFLLRRHLGLKRWISLFVLTLGVSIVSLPSSESSVDAGLFHGIPDHYFPRSNHLLGQAAVADFPPTDSHLTKRS
ATYQGIANDLPPPDPLMNYSAGATAAVVAAVVSGLAGVYFEKILKESPTQASVWIRNIQLSFYSIIAATVGGVFW
QDGIGIRQHGFFEGYNWVVWAAILLQAAGGLIASLVIRDADNIVKNFATSISIVISFIVSVWVFKFTVTASFLFG
TSLVLLATYLYSLPERSRHRPPAVRIVSFEKPAIERVVTPGTTPRLADAARLNSDPFDSKGLAMTSSRPNSPMLP
RQSSRTHIMRDD*
Coding >Ophun1|146
ATGACGATACTCGAGGCTGCCGGGCCGCGGCGGTCAAAGGTCGTCACCTTGAGAGAGGACAAGGTCGGGAGGAAC
CTGTCCTTCCTGACGCTGACGTTCCAAAACTCAGCCCTCATCCTGATTATGCATTATTCGCGTATGATGCCCCCT
TCTGGCGACCATCGCTACTTTACCTCGACGGCTGTCCTCCTCAACGAGGTCATCAAGCTGGCCGTATCCCTCACC
CTTGCTATATACGAGACATCCCAGACGCTGGCGCCGAGCACGCCAGCCACCATCCTCTTCGAGCAGATATACAAC
GCCGTCTTTTCCGGCGACGGCTGGAAGCTCGCCCTGCCCGCCGCCTTCTACACCCTGCAGAATCTACTGCAGTAT
CTGGCTGTGGGAAACCTGGACCCCGTCCATTTCCAGGTCCTATACCAGGTCAAGATTCTCACGACTGCTGTCTTC
AGCGTCTTCCTGCTGAGACGACATCTCGGGCTCAAGCGCTGGATCTCGCTCTTTGTTCTGACTCTGGGCGTCTCC
ATCGTCTCCTTACCCTCGTCTGAGTCCTCTGTCGATGCGGGTCTCTTTCACGGCATCCCGGACCACTACTTTCCA
CGGTCCAATCATCTGCTCGGTCAAGCCGCAGTCGCCGACTTCCCACCCACCGACTCACACCTGACCAAGAGATCT
GCCACTTACCAGGGCATCGCCAATGACCTGCCGCCCCCAGATCCCCTCATGAACTATTCTGCCGGCGCCACTGCT
GCTGTCGTTGCCGCCGTCGTCTCCGGCCTGGCGGGTGTCTACTTTGAGAAGATTCTCAAGGAGAGCCCTACGCAG
GCGAGCGTCTGGATTCGAAACATCCAGTTGAGCTTCTACTCCATCATTGCGGCTACGGTCGGTGGTGTCTTCTGG
CAGGACGGTATCGGCATCCGCCAACACGGCTTCTTCGAGGGCTACAATTGGGTCGTATGGGCTGCCATCCTGCTG
CAGGCGGCCGGCGGCCTGATTGCCAGTCTCGTCATTCGAGATGCGGACAACATTGTTAAGAACTTTGCCACAAGC
ATCAGCATCGTCATCAGCTTCATCGTCAGCGTTTGGGTCTTTAAGTTTACCGTCACCGCCTCGTTCCTCTTCGGA
ACATCGCTCGTTCTCTTGGCCACGTATCTTTACAGCCTCCCCGAACGGAGCCGCCATCGGCCACCAGCCGTGCGC
ATCGTGAGCTTCGAGAAGCCTGCCATCGAACGGGTCGTGACTCCGGGGACGACGCCACGCCTCGCGGACGCGGCC
CGCCTCAACTCGGATCCCTTTGACAGCAAGGGTCTAGCCATGACGTCGAGTCGCCCCAACAGCCCCATGCTACCG
CGGCAGTCGAGCCGTACGCACATCATGAGGGATGACTGA
Transcript >Ophun1|146
ATGACGATACTCGAGGCTGCCGGGCCGCGGCGGTCAAAGGTCGTCACCTTGAGAGAGGACAAGGTCGGGAGGAAC
CTGTCCTTCCTGACGCTGACGTTCCAAAACTCAGCCCTCATCCTGATTATGCATTATTCGCGTATGATGCCCCCT
TCTGGCGACCATCGCTACTTTACCTCGACGGCTGTCCTCCTCAACGAGGTCATCAAGCTGGCCGTATCCCTCACC
CTTGCTATATACGAGACATCCCAGACGCTGGCGCCGAGCACGCCAGCCACCATCCTCTTCGAGCAGATATACAAC
GCCGTCTTTTCCGGCGACGGCTGGAAGCTCGCCCTGCCCGCCGCCTTCTACACCCTGCAGAATCTACTGCAGTAT
CTGGCTGTGGGAAACCTGGACCCCGTCCATTTCCAGGTCCTATACCAGGTCAAGATTCTCACGACTGCTGTCTTC
AGCGTCTTCCTGCTGAGACGACATCTCGGGCTCAAGCGCTGGATCTCGCTCTTTGTTCTGACTCTGGGCGTCTCC
ATCGTCTCCTTACCCTCGTCTGAGTCCTCTGTCGATGCGGGTCTCTTTCACGGCATCCCGGACCACTACTTTCCA
CGGTCCAATCATCTGCTCGGTCAAGCCGCAGTCGCCGACTTCCCACCCACCGACTCACACCTGACCAAGAGATCT
GCCACTTACCAGGGCATCGCCAATGACCTGCCGCCCCCAGATCCCCTCATGAACTATTCTGCCGGCGCCACTGCT
GCTGTCGTTGCCGCCGTCGTCTCCGGCCTGGCGGGTGTCTACTTTGAGAAGATTCTCAAGGAGAGCCCTACGCAG
GCGAGCGTCTGGATTCGAAACATCCAGTTGAGCTTCTACTCCATCATTGCGGCTACGGTCGGTGGTGTCTTCTGG
CAGGACGGTATCGGCATCCGCCAACACGGCTTCTTCGAGGGCTACAATTGGGTCGTATGGGCTGCCATCCTGCTG
CAGGCGGCCGGCGGCCTGATTGCCAGTCTCGTCATTCGAGATGCGGACAACATTGTTAAGAACTTTGCCACAAGC
ATCAGCATCGTCATCAGCTTCATCGTCAGCGTTTGGGTCTTTAAGTTTACCGTCACCGCCTCGTTCCTCTTCGGA
ACATCGCTCGTTCTCTTGGCCACGTATCTTTACAGCCTCCCCGAACGGAGCCGCCATCGGCCACCAGCCGTGCGC
ATCGTGAGCTTCGAGAAGCCTGCCATCGAACGGGTCGTGACTCCGGGGACGACGCCACGCCTCGCGGACGCGGCC
CGCCTCAACTCGGATCCCTTTGACAGCAAGGGTCTAGCCATGACGTCGAGTCGCCCCAACAGCCCCATGCTACCG
CGGCAGTCGAGCCGTACGCACATCATGAGGGATGACTGA
Gene >Ophun1|146
ATGACGATACTCGAGGCTGCCGGGCCGCGGCGGTCAAAGGTCGTCACCTTGAGAGAGGACAAGGTCGGGAGGAAC
CTGTCCTTCCTGACGGTATGGCTGCCCTCGCCGCTCTGTTGTTATGGGCACTGACTTGTTGTCTAGCTGACGTTC
CAAAACTCAGCCCTCATCCTGGTACGTTGAACCTTCTGCGCTTCGTCGAGGCTTCTTGACTGACGGCACTGGCCT
TTTCCAGATTATGCATTATTCGCGTATGATGCCCCCTTCTGGCGACCATCGCTACTTTACCTCGACGGCTGTCCT
CCTCAACGAGGTCATCAAGCTGGCCGTATCCCTCACCCTTGCTATATACGAGACATCCCAGACGCTGGCGCCGAG
CACGCCAGCCACCATCCTCTTCGAGCAGATATACAACGCCGTCTTTTCCGGCGACGGCTGGAAGCTCGCCCTGCC
CGCCGCCTTCTACACCCTGCAGAATCTACTGCAGTATCTGGCTGTGGGAAACCTGGACCCCGTCCATTTCCAGGT
CCTATACCAGGTCAAGGTCGGTGCGCCGCAGCGAGGTGGCCATCATGAAATCTGCTGACATGCTCGCCAGATTCT
CACGACTGCTGTCTTCAGCGTCTTCCTGCTGAGACGACATCTCGGGCTCAAGCGCTGGATCTCGCTCTTTGTTCT
GACTCTGGGCGTCTCCATCGTCTCCTTACCCTCGTCTGAGTCCTCTGTCGATGCGGGTCTCTTTCACGGCATCCC
GGACCACTACTTTCCACGGTCCAATCATCTGCTCGGTCAAGCCGCAGTCGCCGACTTCCCACCCACCGACTCACA
CCTGACCAAGAGATCTGCCACTTACCAGGGCATCGCCAATGACCTGCCGCCCCCAGATCCCCTCATGAACTATTC
TGCCGGCGCCACTGCTGCTGTCGTTGCCGCCGTCGTCTCCGGCCTGGCGGGTGTCTACTTTGAGAAGATTCTCAA
GGAGAGCCCTACGCAGGCGAGCGTCTGGATTCGAAACATCCAGTTGAGCTTCTACTCCATCATTGCGGCTACGGT
CGGTGGTGTCTTCTGGCAGGACGGTATCGGCATCCGCCAACACGGCTTCTTCGAGGGCTACAATTGGGTCGTATG
GGCTGCCATCCTGCTGCAGGCGGCCGGCGGCCTGATTGCCAGTCTCGTCATTCGAGATGCGGACAACATTGTTAA
GAACTTTGCCACAAGCATCAGCATCGTCATCAGCTTCATCGTCAGCGTTTGGGTCTTTAAGTTTACCGTCACCGC
CTCGGTAAGCAATAACCCTTGCATTCTCGCAGCGTGATACGTCGTTGCTGACATGTTGTGGTTCTGAAAAACAGT
TCCTCTTCGGAACATCGCTCGTTCTCTTGGCCACGTATCTTTACAGCCTCCCCGAACGGAGCCGCCATCGGCCAC
CAGCCGTGCGCATCGTGAGCTTCGAGAAGCCTGCCATCGAACGGGTCGTGACTCCGGGGACGACGCCACGCCTCG
CGGACGCGGCCCGCCTCAACTCGGATCCCTTTGACAGCAAGGGTCTAGCCATGACGTCGAGTCGCCCCAACAGCC
CCATGCTACCGCGGCAGTCGAGCCGTACGCACATCATGAGGGATGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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