Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1455
Gene name
LocationContig_1597:248..954
Strand+
Gene length (bp)706
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1455
MARSPANIRLRSAAIRTFCGAVFTLVSSIVSLLRLRPPLDNIKRQIHNLEQHLIPQRRPNPLPPALHDARQRSLV
SALAASAAAAIPRVIGVVGARSGGDDDDSAREQAVAS*
Coding >Ophun1|1455
ATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATTCGCACCTTTTGCGGCGCCGTCTTTACCCTC
GTCAGCAGCATTGTTTCTCTTCTCCGCCTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACAACCTCGAG
CAGCACCTCATCCCGCAACGCCGCCCCAACCCCCTGCCGCCTGCGCTCCACGACGCCCGTCAACGCAGCCTCGTC
TCCGCCCTCGCAGCATCAGCAGCAGCAGCCATCCCCCGAGTCATTGGCGTCGTCGGGGCGCGCAGTGGTGGTGAC
GACGACGATTCGGCACGAGAGCAGGCCGTTGCATCATGA
Transcript >Ophun1|1455
ATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATTCGCACCTTTTGCGGCGCCGTCTTTACCCTC
GTCAGCAGCATTGTTTCTCTTCTCCGCCTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACAACCTCGAG
CAGCACCTCATCCCGCAACGCCGCCCCAACCCCCTGCCGCCTGCGCTCCACGACGCCCGTCAACGCAGCCTCGTC
TCCGCCCTCGCAGCATCAGCAGCAGCAGCCATCCCCCGAGTCATTGGCGTCGTCGGGGCGCGCAGTGGTGGTGAC
GACGACGATTCGGCACGAGAGCAGGCCGTTGCATCATGA
Gene >Ophun1|1455
ATGGCTCGCAGCCCGGCCAATATCCGGCTCCGTTCGGCCGCCATTCGCACCTTTTGCGGCGCCGTCTTTACCCTC
GTCAGCAGCATTGTGTGAGTGGGCGCTTGGCTTTGATGGGCGGGGATGAGTGAAGCTGACGGGATAGGAACCTTT
CGGTGTTGATGGCGTTGGATGGGGAGCCTGGTTGGGTTTGTTTGATGTGTTGCAATTGTGATAGTTGGTTGCCCT
TTTCTTTGCTGTTGCTTGTCGTCAACTCCCGTCAACTCGGCTCTTCTTTACACAACTCGAGGTTACGTCGATTCA
ACACTGCTCTTCTCAACTCTTCTACTCCTCTGTACTCGCTTCATCAACACTCCTTCCCCCAAGTCTATCCCCTTC
ACAGCCATCGTCACTCACCACTCTGCCTCACCCCTACCTCAACACAACCCCCCCATATTCTCCCCTCTCTAACAC
GCCCAGTTCTCTTCTCCGCCTGCGTCCTCCACTGGATAACATCAAACGACAAATCCACAACCTCGAGCAGCACCT
CATCCCGCAACGCCGCCCCAACCCCCTGCCGCCTGCGCTCCACGACGCCCGTCAACGCAGCCTCGTCTCCGCCCT
CGCAGCATCAGCAGCAGCAGCCATCCCCCGAGTCATTGGCGTCGTCGGGGCGCGCAGTGGTGGTGACGACGACGA
TTCGGCACGAGAGCAGGCCGTTGCATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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