© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|1391 |
| Gene name | |
| Location | Contig_156:22241..23123 |
| Strand | + |
| Gene length (bp) | 882 |
| Transcript length (bp) | 882 |
| Coding sequence length (bp) | 882 |
| Protein length (aa) | 294 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF17784 | Sulfotransfer_4 | Sulfotransferase domain | 3.7E-65 | 15 | 242 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 260 | 282 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1391 MAQPVGVPDRVVPMRVIVVGAHRTGTMSMRSALWQLGFHDCYHMHTVMQNSEDHPDMWIRAMEAKFAGKGTFTKA DWDRLLGHYQACCDAPAAFFSAELAEVYPDAKVVVLNRDPNKWYESALNTVHKALKETPLSTKLTRWYCYALDAQ TRSWMRFAKVMTTLCLNFDHGKEREKAIAWFQGQYKECHDRIPAERCLEYTIQDGWQPLCEHLGVPVPTALDPRT GELVEVPFPRINDRDTFKLNMTRNLRRSVARANKNAFVLVGRMAAMTFVAYGAYMVWKSNHETMPNDM* |
| Coding | >Ophun1|1391 ATGGCTCAACCCGTCGGCGTCCCGGACCGTGTGGTCCCCATGCGTGTCATTGTTGTCGGCGCCCACCGCACCGGT ACCATGAGCATGAGATCAGCCCTGTGGCAGCTCGGCTTTCACGATTGCTATCACATGCACACGGTGATGCAGAAC TCCGAAGACCACCCCGACATGTGGATCCGCGCCATGGAGGCCAAGTTCGCCGGCAAGGGAACCTTTACCAAGGCC GACTGGGACCGCCTTCTCGGCCACTATCAGGCCTGCTGCGACGCGCCCGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTACCCGGACGCAAAGGTCGTCGTCCTCAACCGGGACCCTAACAAGTGGTACGAGAGCGCGCTCAACACC GTCCACAAGGCCCTCAAGGAGACGCCCCTATCGACCAAGCTCACACGGTGGTACTGCTACGCCCTGGATGCTCAG ACACGCAGTTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGTCTGAATTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCATGGTTCCAGGGCCAGTACAAGGAATGCCACGACCGCATTCCGGCCGAACGGTGCCTCGAGTAC ACCATCCAGGACGGTTGGCAGCCTCTTTGTGAGCACCTTGGCGTGCCCGTTCCCACTGCTCTGGACCCAAGGACG GGCGAGTTGGTCGAAGTCCCGTTCCCTCGCATCAACGACCGCGATACGTTCAAGCTCAACATGACGCGCAACTTA CGACGCTCGGTAGCCCGCGCCAACAAGAATGCGTTTGTCCTGGTCGGCAGGATGGCGGCCATGACCTTTGTGGCG TACGGAGCTTACATGGTCTGGAAGAGTAATCATGAGACGATGCCCAACGACATGTAG |
| Transcript | >Ophun1|1391 ATGGCTCAACCCGTCGGCGTCCCGGACCGTGTGGTCCCCATGCGTGTCATTGTTGTCGGCGCCCACCGCACCGGT ACCATGAGCATGAGATCAGCCCTGTGGCAGCTCGGCTTTCACGATTGCTATCACATGCACACGGTGATGCAGAAC TCCGAAGACCACCCCGACATGTGGATCCGCGCCATGGAGGCCAAGTTCGCCGGCAAGGGAACCTTTACCAAGGCC GACTGGGACCGCCTTCTCGGCCACTATCAGGCCTGCTGCGACGCGCCCGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTACCCGGACGCAAAGGTCGTCGTCCTCAACCGGGACCCTAACAAGTGGTACGAGAGCGCGCTCAACACC GTCCACAAGGCCCTCAAGGAGACGCCCCTATCGACCAAGCTCACACGGTGGTACTGCTACGCCCTGGATGCTCAG ACACGCAGTTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGTCTGAATTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCATGGTTCCAGGGCCAGTACAAGGAATGCCACGACCGCATTCCGGCCGAACGGTGCCTCGAGTAC ACCATCCAGGACGGTTGGCAGCCTCTTTGTGAGCACCTTGGCGTGCCCGTTCCCACTGCTCTGGACCCAAGGACG GGCGAGTTGGTCGAAGTCCCGTTCCCTCGCATCAACGACCGCGATACGTTCAAGCTCAACATGACGCGCAACTTA CGACGCTCGGTAGCCCGCGCCAACAAGAATGCGTTTGTCCTGGTCGGCAGGATGGCGGCCATGACCTTTGTGGCG TACGGAGCTTACATGGTCTGGAAGAGTAATCATGAGACGATGCCCAACGACATGTAG |
| Gene | >Ophun1|1391 ATGGCTCAACCCGTCGGCGTCCCGGACCGTGTGGTCCCCATGCGTGTCATTGTTGTCGGCGCCCACCGCACCGGT ACCATGAGCATGAGATCAGCCCTGTGGCAGCTCGGCTTTCACGATTGCTATCACATGCACACGGTGATGCAGAAC TCCGAAGACCACCCCGACATGTGGATCCGCGCCATGGAGGCCAAGTTCGCCGGCAAGGGAACCTTTACCAAGGCC GACTGGGACCGCCTTCTCGGCCACTATCAGGCCTGCTGCGACGCGCCCGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTACCCGGACGCAAAGGTCGTCGTCCTCAACCGGGACCCTAACAAGTGGTACGAGAGCGCGCTCAACACC GTCCACAAGGCCCTCAAGGAGACGCCCCTATCGACCAAGCTCACACGGTGGTACTGCTACGCCCTGGATGCTCAG ACACGCAGTTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGTCTGAATTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCATGGTTCCAGGGCCAGTACAAGGAATGCCACGACCGCATTCCGGCCGAACGGTGCCTCGAGTAC ACCATCCAGGACGGTTGGCAGCCTCTTTGTGAGCACCTTGGCGTGCCCGTTCCCACTGCTCTGGACCCAAGGACG GGCGAGTTGGTCGAAGTCCCGTTCCCTCGCATCAACGACCGCGATACGTTCAAGCTCAACATGACGCGCAACTTA CGACGCTCGGTAGCCCGCGCCAACAAGAATGCGTTTGTCCTGGTCGGCAGGATGGCGGCCATGACCTTTGTGGCG TACGGAGCTTACATGGTCTGGAAGAGTAATCATGAGACGATGCCCAACGACATGTAG |