Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1305
Gene name
LocationContig_151:6794..7579
Strand-
Gene length (bp)785
Transcript length (bp)360
Coding sequence length (bp)360
Protein length (aa) 120

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08122 NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit family 4.2E-24 59 110

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0022900 electron transport chain Yes
GO:0005739 mitochondrion Yes
GO:0043226 organelle No
GO:0006091 generation of precursor metabolites and energy No
GO:0043229 intracellular organelle No
GO:0008152 metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0043227 membrane-bounded organelle No
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0044237 cellular metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 82 104 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1305
MSSKTQRETGSSLFCCDSTVVVCGIALFQILLAARQTKPNITGFDIRALRAATGVPKYDPWERAEAWRYQGTFTR
WNRFKNATPGLGIATVAFTIYCVYEHYFLESEHHDQSHAEEGHH*
Coding >Ophun1|1305
ATGTCCAGCAAGACGCAGCGGGAAACAGGGAGCAGTCTTTTCTGCTGCGACTCGACCGTCGTCGTCTGTGGGATC
GCGCTTTTCCAGATCCTACTCGCCGCCCGCCAAACCAAGCCAAACATCACCGGCTTCGACATACGCGCCCTCAGG
GCCGCCACCGGTGTACCGAAATACGACCCGTGGGAGCGAGCCGAGGCCTGGCGATACCAGGGCACCTTTACCCGC
TGGAACCGCTTCAAGAACGCCACTCCCGGTCTCGGCATCGCCACCGTTGCCTTTACCATCTACTGCGTCTACGAG
CACTACTTTCTCGAGAGCGAACACCACGACCAGAGCCATGCCGAAGAGGGCCACCACTGA
Transcript >Ophun1|1305
ATGTCCAGCAAGACGCAGCGGGAAACAGGGAGCAGTCTTTTCTGCTGCGACTCGACCGTCGTCGTCTGTGGGATC
GCGCTTTTCCAGATCCTACTCGCCGCCCGCCAAACCAAGCCAAACATCACCGGCTTCGACATACGCGCCCTCAGG
GCCGCCACCGGTGTACCGAAATACGACCCGTGGGAGCGAGCCGAGGCCTGGCGATACCAGGGCACCTTTACCCGC
TGGAACCGCTTCAAGAACGCCACTCCCGGTCTCGGCATCGCCACCGTTGCCTTTACCATCTACTGCGTCTACGAG
CACTACTTTCTCGAGAGCGAACACCACGACCAGAGCCATGCCGAAGAGGGCCACCACTGA
Gene >Ophun1|1305
ATGTCCAGCAAGACGCAGCGGGAAACAGGGAGCAGTCTTTTCTGCTGCGACTCGACCGTCGTCGTCTGTGGGATC
GCGCTTTTCCAGTCAGTGCCAGATTCCAAGGCATGCCTCGGAGTCGGGCTTGACAACGCGAAGGACGAAGAGGAG
GCAGGTTGATCCGTGCACCAATCGGAATATCCCCATTAGTTTTTCCGATGAGCCTCAACGCAGCACCACCCACAT
CACACCTATTCGTACATGGAAGCTACCCACCTCCATCTAGAGCTCACCACCACCAGTCTGTCTCTCCAGCTCCGT
CCCTCCTCTGGCTATCCATTCCTGACTATTCAATCTCAGTCACAGCTCCTCTCTTTCTGGTCACACCGCCAGCGC
CGCAGCATCGCCATGCTCCCAACAAGGCACGCCCCCTCCGCCCAACCACCACCACCACACTGACAGCCCAGGATC
CTACTCGCCGCCCGCCAAACCAAGCCAAACATCACCGGCTTCGACATACGCGCCCTCAGGGCCGCCACCGGTGTA
CCGAAATACGACCCGTGGGAGCGAGCGTCCGTCGTCCCCTTCCGGCCTCGCTCGTCCCGCAGAGACTAATCCTTG
TTCTTCACTCCCTCAGCGAGGCCTGGCGATACCAGGGCACCTTTACCCGCTGGAACCGCTTCAAGAACGCCACTC
CCGGTCTCGGCATCGCCACCGTTGCCTTTACCATCTACTGCGTCTACGAGCACTACTTTCTCGAGAGCGAACACC
ACGACCAGAGCCATGCCGAAGAGGGCCACCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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