Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1264
Gene name
LocationContig_15:18603..19157
Strand-
Gene length (bp)554
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16015 Promethin Promethin 6.8E-27 30 133

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 85 107 22
3 112 134 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1264
MASSQESGTIHHQQSNGFHHAQEITLPQRLLDSLVAPSSRRRAYDYASSVASSRPILFSLVASQLLFSFPPILLF
VVFTAATTAFALGAAVLFVLFWLAFALLLLLPALIVASSLALLVWAWALCSFFAARWIWSSANAVVAARNPDGSR
ANAKAAAVN*
Coding >Ophun1|1264
ATGGCCTCCTCGCAAGAATCGGGCACCATCCACCATCAGCAAAGCAACGGCTTTCACCACGCCCAAGAAATAACC
CTCCCCCAACGACTCCTAGATTCCCTCGTCGCCCCGTCTTCGCGCCGTCGCGCATACGACTACGCCTCGTCCGTC
GCCTCGTCGCGACCCATCCTCTTCTCGCTGGTCGCGTCGCAGTTACTCTTCTCCTTCCCCCCCATCCTCCTCTTC
GTCGTCTTCACCGCCGCAACCACCGCCTTCGCCCTCGGCGCCGCCGTCCTCTTCGTCCTCTTCTGGCTCGCCTTC
GCCCTTCTCCTACTCCTCCCCGCCCTCATCGTCGCCTCGTCTCTCGCCTTGCTCGTCTGGGCTTGGGCATTGTGC
AGCTTCTTCGCCGCTCGCTGGATCTGGTCGAGCGCAAATGCCGTCGTCGCCGCAAGGAATCCTGATGGCAGCCGT
GCCAACGCAAAGGCCGCTGCCGTCAACTGA
Transcript >Ophun1|1264
ATGGCCTCCTCGCAAGAATCGGGCACCATCCACCATCAGCAAAGCAACGGCTTTCACCACGCCCAAGAAATAACC
CTCCCCCAACGACTCCTAGATTCCCTCGTCGCCCCGTCTTCGCGCCGTCGCGCATACGACTACGCCTCGTCCGTC
GCCTCGTCGCGACCCATCCTCTTCTCGCTGGTCGCGTCGCAGTTACTCTTCTCCTTCCCCCCCATCCTCCTCTTC
GTCGTCTTCACCGCCGCAACCACCGCCTTCGCCCTCGGCGCCGCCGTCCTCTTCGTCCTCTTCTGGCTCGCCTTC
GCCCTTCTCCTACTCCTCCCCGCCCTCATCGTCGCCTCGTCTCTCGCCTTGCTCGTCTGGGCTTGGGCATTGTGC
AGCTTCTTCGCCGCTCGCTGGATCTGGTCGAGCGCAAATGCCGTCGTCGCCGCAAGGAATCCTGATGGCAGCCGT
GCCAACGCAAAGGCCGCTGCCGTCAACTGA
Gene >Ophun1|1264
ATGGCCTCCTCGCAAGAATCGGGCACCATCCACCATCAGCAAAGCAACGGCTTTCACCACGCCCAAGAAATAACC
CTCCCCCAACGACTCCTAGATTCCCTCGTCGCCCCGTCTTCGCGCCGTCGCGCATACGACTACGCCTCGTCCGTC
GCCTCGTCGCGACCCATCCTCTTCGTTGGTTCCCCTTCTCTCTACCTTGCTTCTAACAAACATGACATCATGGGC
TGATTCTCAACCCTGATATCTAGTCGCTGGTCGCGTCGCAGTTACTCTTCTCCTTCCCCCCCATCCTCCTCTTCG
TCGTCTTCACCGCCGCAACCACCGCCTTCGCCCTCGGCGCCGCCGTCCTCTTCGTCCTCTTCTGGCTCGCCTTCG
CCCTTCTCCTACTCCTCCCCGCCCTCATCGTCGCCTCGTCTCTCGCCTTGCTCGTCTGGGCTTGGGCATTGTGCA
GCTTCTTCGCCGCTCGCTGGATCTGGTCGAGCGCAAATGCCGTCGTCGCCGCAAGGAATCCTGATGGCAGCCGTG
CCAACGCAAAGGCCGCTGCCGTCAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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