Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1259
Gene name
LocationContig_15:10129..10938
Strand-
Gene length (bp)809
Transcript length (bp)636
Coding sequence length (bp)636
Protein length (aa) 212

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05529 Bap31 Bap31/Bap29 transmembrane region 1.7E-49 1 140
PF18035 Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain 1.2E-11 162 210

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 1 210 1.0E-38
sp|Q07451|YET3_YEAST Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 1 204 2.0E-29
sp|P35723|YET1_YEAST Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 15 193 6.0E-13
sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2 1 210 6.0E-12
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29 PE=1 SV=2 1 211 1.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1 1 210 1.0E-38
sp|Q07451|YET3_YEAST Endoplasmic reticulum transmembrane protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET3 PE=1 SV=1 1 204 2.0E-29
sp|P35723|YET1_YEAST Endoplasmic reticulum transmembrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET1 PE=1 SV=2 15 193 6.0E-13
sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2 1 210 6.0E-12
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29 PE=1 SV=2 1 211 1.0E-10
sp|Q5R9U7|BAP29_PONAB B-cell receptor-associated protein 29 OS=Pongo abelii GN=BCAP29 PE=2 SV=1 1 211 4.0E-10
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29 PE=1 SV=1 1 211 6.0E-10
sp|Q04210|YET2_YEAST Endoplasmic reticulum transmembrane protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YET2 PE=1 SV=1 1 183 7.0E-09
sp|Q32KL9|BAP29_BOVIN B-cell receptor-associated protein 29 OS=Bos taurus GN=BCAP29 PE=2 SV=1 1 205 1.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 49 66 17
3 109 131 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1259
MTLYYTLVFILLMFEMGLFMLLLVPLPFNVKRRIFTFISENPLVAKMEYWMKITFFFILILFVDSVNRVYRVQQE
LMAASDQSKGTTTIIGSERLEVQARKFYSQRNMYLCGFTLFLSLILNRTYVMIIQVMRLEDRLKTYEGTNKDTKQ
SEKLAVAGKPGELAALKKEVARKEEDLQTLKKQSEQLHKSYDELSDKYAALQKDKEPRKDK*
Coding >Ophun1|1259
ATGACGCTCTACTACACGCTCGTCTTCATACTGCTCATGTTCGAGATGGGGCTGTTCATGCTCCTTCTCGTGCCG
CTGCCCTTCAATGTCAAGAGGCGGATCTTTACCTTCATCTCGGAGAATCCGTTGGTGGCCAAGATGGAGTATTGG
ATGAAGATTACCTTTTTCTTCATCCTCATTCTATTCGTCGACAGTGTCAATCGTGTGTATCGCGTCCAGCAAGAG
CTCATGGCTGCGTCGGATCAGTCCAAGGGAACCACCACCATCATCGGCTCTGAGCGGCTCGAGGTGCAGGCGCGC
AAGTTTTACTCGCAGCGGAACATGTATCTCTGCGGCTTCACGCTCTTCCTGTCGCTGATCCTGAACCGCACCTAC
GTCATGATCATCCAGGTCATGAGGCTCGAGGACCGGCTCAAGACGTACGAGGGCACCAACAAGGACACCAAGCAG
AGCGAGAAGTTGGCCGTTGCCGGTAAGCCCGGTGAGCTGGCGGCGCTCAAGAAGGAGGTCGCCCGCAAGGAGGAG
GACTTGCAGACGCTCAAGAAGCAGAGCGAGCAGCTCCACAAGAGCTATGACGAGCTGAGCGACAAGTACGCAGCT
CTTCAGAAGGATAAGGAGCCTCGCAAGGATAAATGA
Transcript >Ophun1|1259
ATGACGCTCTACTACACGCTCGTCTTCATACTGCTCATGTTCGAGATGGGGCTGTTCATGCTCCTTCTCGTGCCG
CTGCCCTTCAATGTCAAGAGGCGGATCTTTACCTTCATCTCGGAGAATCCGTTGGTGGCCAAGATGGAGTATTGG
ATGAAGATTACCTTTTTCTTCATCCTCATTCTATTCGTCGACAGTGTCAATCGTGTGTATCGCGTCCAGCAAGAG
CTCATGGCTGCGTCGGATCAGTCCAAGGGAACCACCACCATCATCGGCTCTGAGCGGCTCGAGGTGCAGGCGCGC
AAGTTTTACTCGCAGCGGAACATGTATCTCTGCGGCTTCACGCTCTTCCTGTCGCTGATCCTGAACCGCACCTAC
GTCATGATCATCCAGGTCATGAGGCTCGAGGACCGGCTCAAGACGTACGAGGGCACCAACAAGGACACCAAGCAG
AGCGAGAAGTTGGCCGTTGCCGGTAAGCCCGGTGAGCTGGCGGCGCTCAAGAAGGAGGTCGCCCGCAAGGAGGAG
GACTTGCAGACGCTCAAGAAGCAGAGCGAGCAGCTCCACAAGAGCTATGACGAGCTGAGCGACAAGTACGCAGCT
CTTCAGAAGGATAAGGAGCCTCGCAAGGATAAATGA
Gene >Ophun1|1259
ATGACGCTCTACTACACGCTCGTGGGTCGACGCAGCGACGAAGAGCAAGAAGGCTGCTGACGGAATCGGCCAGGT
CTTCATACTGCTCATGTTCGAGATGGGGCTGTTCATGCTCCTTCTCGTGCCGCTGCCCTTCAATGTCAAGAGGCG
GATCTTTACGTGCGTCGTGTCGTCTCCTGTGGGGCTTCGATGGCTGACGATGGGTGGGGATAGCTTCATCTCGGA
GAATCCGTTGGTGGCCAAGATGGAGTATTGGATGAAGATTACCTTTTTCTTCATCCTCATTCTATTCGTCGACAG
TGTCAATCGTGTGTATCGCGTCCAGCAAGAGCTCATGGCTGCGTCGGATCAGTCCAAGGGAACGTGGGTGCCCGG
CTCTTTACCGTCGGGTAGACAAGTACGAAGGATGCTGACTCGGATTGTCCGGCAGCACCACCATCATCGGCTCTG
AGCGGCTCGAGGTGCAGGCGCGCAAGTTTTACTCGCAGCGGAACATGTATCTCTGCGGCTTCACGCTCTTCCTGT
CGCTGATCCTGAACCGCACCTACGTCATGATCATCCAGGTCATGAGGCTCGAGGACCGGCTCAAGACGTACGAGG
GCACCAACAAGGACACCAAGCAGAGCGAGAAGTTGGCCGTTGCCGGTAAGCCCGGTGAGCTGGCGGCGCTCAAGA
AGGAGGTCGCCCGCAAGGAGGAGGACTTGCAGACGCTCAAGAAGCAGAGCGAGCAGCTCCACAAGAGCTATGACG
AGCTGAGCGACAAGTACGCAGCTCTTCAGAAGGATAAGGAGCCTCGCAAGGATAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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